RNA–Protein interactions for RNA: ENST00000641307.1

GYPA-213, Transcript of glycophorin A (MNS blood group), humanhuman

Gene GYPA, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-213ENST00000641307 TMEM92Q6UXU6 159 aa10.69□□□□□ -0.7
GYPA-213ENST00000641307 KIF3CO14782 793 aa10.67□□□□□ -0.7
GYPA-213ENST00000641307 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.7
GYPA-213ENST00000641307 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
GYPA-213ENST00000641307 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
GYPA-213ENST00000641307 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
GYPA-213ENST00000641307 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
GYPA-213ENST00000641307 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
GYPA-213ENST00000641307 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
GYPA-213ENST00000641307 PDE4AP27815 886 aa10.57□□□□□ -0.72
GYPA-213ENST00000641307 MFSD10Q14728 455 aa10.57□□□□□ -0.72
GYPA-213ENST00000641307 TMC2Q8TDI7 906 aa10.57□□□□□ -0.72
GYPA-213ENST00000641307 FOXK1P85037 733 aa10.56□□□□□ -0.72
GYPA-213ENST00000641307 DSG2Q14126 1118 aa10.53□□□□□ -0.72
GYPA-213ENST00000641307 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
GYPA-213ENST00000641307 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
GYPA-213ENST00000641307 SNPHO15079 494 aa10.49□□□□□ -0.73
GYPA-213ENST00000641307 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
GYPA-213ENST00000641307 PPP1R15BQ5SWA1 713 aa10.49□□□□□ -0.73
GYPA-213ENST00000641307 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
GYPA-213ENST00000641307 SLC34A2O95436 690 aa10.48□□□□□ -0.73
GYPA-213ENST00000641307 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
GYPA-213ENST00000641307 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
GYPA-213ENST00000641307 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
GYPA-213ENST00000641307 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
GYPA-213ENST00000641307 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
GYPA-213ENST00000641307 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
GYPA-213ENST00000641307 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
GYPA-213ENST00000641307 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
GYPA-213ENST00000641307 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
GYPA-213ENST00000641307 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
GYPA-213ENST00000641307 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
GYPA-213ENST00000641307 ST18O60284 1047 aa10.38□□□□□ -0.75
GYPA-213ENST00000641307 EMILIN3Q9NT22 766 aa10.38□□□□□ -0.75
GYPA-213ENST00000641307 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
GYPA-213ENST00000641307 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
GYPA-213ENST00000641307 E2F4Q16254 413 aa10.36□□□□□ -0.75
GYPA-213ENST00000641307 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
GYPA-213ENST00000641307 KDM4FA0A1W2PPD8 638 aa10.35□□□□□ -0.75
GYPA-213ENST00000641307 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
GYPA-213ENST00000641307 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
GYPA-213ENST00000641307 PCDHGA4Q9Y5G9 962 aa10.35□□□□□ -0.75
GYPA-213ENST00000641307 ARSIQ5FYB1 569 aa10.32□□□□□ -0.76
GYPA-213ENST00000641307 TBC1D12O60347 775 aa10.3□□□□□ -0.76
GYPA-213ENST00000641307 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
GYPA-213ENST00000641307 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
GYPA-213ENST00000641307 UPF1Q92900 1129 aaKnown RBP eCLIP10.29□□□□□ -0.76
GYPA-213ENST00000641307 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.76
GYPA-213ENST00000641307 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
GYPA-213ENST00000641307 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
GYPA-213ENST00000641307 DPYSL4O14531 572 aa10.26□□□□□ -0.77
GYPA-213ENST00000641307 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
GYPA-213ENST00000641307 NUDT7P0C024 238 aa10.25□□□□□ -0.77
GYPA-213ENST00000641307 MAP3K9P80192 1104 aa10.25□□□□□ -0.77
GYPA-213ENST00000641307 PDIA6Q15084 440 aa10.24□□□□□ -0.77
GYPA-213ENST00000641307 MARVELD3Q96A59 401 aa10.23□□□□□ -0.77
GYPA-213ENST00000641307 ABCC9O60706 1549 aa10.23□□□□□ -0.77
GYPA-213ENST00000641307 EVI5O60447 810 aa10.22□□□□□ -0.77
GYPA-213ENST00000641307 ZNF316A6NFI3 1004 aaPredicted RBP10.21□□□□□ -0.77
GYPA-213ENST00000641307 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
GYPA-213ENST00000641307 EMP3P54852 163 aa10.21□□□□□ -0.77
GYPA-213ENST00000641307 PTGER2P43116 358 aa10.19□□□□□ -0.78
GYPA-213ENST00000641307 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
GYPA-213ENST00000641307 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
GYPA-213ENST00000641307 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
GYPA-213ENST00000641307 POTEMA6NI47 508 aa10.17□□□□□ -0.78
GYPA-213ENST00000641307 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
GYPA-213ENST00000641307 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
GYPA-213ENST00000641307 ERBB3P21860 1342 aa10.15□□□□□ -0.78
GYPA-213ENST00000641307 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
GYPA-213ENST00000641307 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
GYPA-213ENST00000641307 FOSBP53539 338 aa10.14□□□□□ -0.79
GYPA-213ENST00000641307 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
GYPA-213ENST00000641307 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
GYPA-213ENST00000641307 PHF14O94880 888 aa10.11□□□□□ -0.79
GYPA-213ENST00000641307 ZNF687Q8N1G0 1237 aa10.1□□□□□ -0.79
GYPA-213ENST00000641307 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
GYPA-213ENST00000641307 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
GYPA-213ENST00000641307 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
GYPA-213ENST00000641307 EPAS1Q99814 870 aa10.08□□□□□ -0.8
GYPA-213ENST00000641307 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
GYPA-213ENST00000641307 SEMA3EO15041 775 aa10.07□□□□□ -0.8
GYPA-213ENST00000641307 DDX12PQ92771 950 aa10.07□□□□□ -0.8
GYPA-213ENST00000641307 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
GYPA-213ENST00000641307 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
GYPA-213ENST00000641307 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
GYPA-213ENST00000641307 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
GYPA-213ENST00000641307 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
GYPA-213ENST00000641307 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
GYPA-213ENST00000641307 ZCCHC6Q5VYS8 1495 aaKnown RBP10.04□□□□□ -0.8
GYPA-213ENST00000641307 OSBPP22059 807 aa10.04□□□□□ -0.8
GYPA-213ENST00000641307 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
GYPA-213ENST00000641307 PBX2P40425 430 aa10.03□□□□□ -0.8
GYPA-213ENST00000641307 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
GYPA-213ENST00000641307 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
GYPA-213ENST00000641307 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
GYPA-213ENST00000641307 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
GYPA-213ENST00000641307 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
GYPA-213ENST00000641307 NBR1Q14596 966 aa10.01□□□□□ -0.81
GYPA-213ENST00000641307 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms