RNA–Protein interactions for RNA: ENST00000641260.1

SAMMSON-210, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,308 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-210ENST00000641260 GSE1Q14687 1217 aa9.03□□□□□ -0.96
SAMMSON-210ENST00000641260 GLIPR1L2Q4G1C9 344 aa9.03□□□□□ -0.96
SAMMSON-210ENST00000641260 ANO8Q9HCE9 1232 aaPredicted RBP9.03□□□□□ -0.96
SAMMSON-210ENST00000641260 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
SAMMSON-210ENST00000641260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.97
SAMMSON-210ENST00000641260 CC2D2AQ9P2K1 1620 aa9.01□□□□□ -0.97
SAMMSON-210ENST00000641260 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
SAMMSON-210ENST00000641260 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
SAMMSON-210ENST00000641260 POTEB3A0JP26 581 aa9□□□□□ -0.97
SAMMSON-210ENST00000641260 POTEBQ6S5H4 581 aa9□□□□□ -0.97
SAMMSON-210ENST00000641260 KLHL34Q8N239 644 aa9□□□□□ -0.97
SAMMSON-210ENST00000641260 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
SAMMSON-210ENST00000641260 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
SAMMSON-210ENST00000641260 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
SAMMSON-210ENST00000641260 FAM205CA6NFA0 338 aa8.99□□□□□ -0.97
SAMMSON-210ENST00000641260 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
SAMMSON-210ENST00000641260 PSEN1P49768 467 aa8.98□□□□□ -0.97
SAMMSON-210ENST00000641260 ILDR1Q86SU0 546 aaPredicted RBP8.94□□□□□ -0.98
SAMMSON-210ENST00000641260 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
SAMMSON-210ENST00000641260 VASPP50552 380 aaPredicted RBP8.93□□□□□ -0.98
SAMMSON-210ENST00000641260 DPY19L2Q6NUT2 758 aa8.93□□□□□ -0.98
SAMMSON-210ENST00000641260 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
SAMMSON-210ENST00000641260 PDIA4P13667 645 aaKnown RBP8.91□□□□□ -0.98
SAMMSON-210ENST00000641260 G3V3G9 751 aa8.89□□□□□ -0.99
SAMMSON-210ENST00000641260 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
SAMMSON-210ENST00000641260 PDE4CQ08493 712 aa8.89□□□□□ -0.99
SAMMSON-210ENST00000641260 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
SAMMSON-210ENST00000641260 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
SAMMSON-210ENST00000641260 TSHZ2Q9NRE2 1034 aa8.88□□□□□ -0.99
SAMMSON-210ENST00000641260 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
SAMMSON-210ENST00000641260 ZNF710Q8N1W2 664 aa8.85□□□□□ -0.99
SAMMSON-210ENST00000641260 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
SAMMSON-210ENST00000641260 ZNF326Q5BKZ1 582 aaKnown RBP8.83□□□□□ -1
SAMMSON-210ENST00000641260 TAF7LQ5H9L4 462 aa8.83□□□□□ -1
SAMMSON-210ENST00000641260 DIEXFQ68CQ4 756 aaKnown RBP8.83□□□□□ -1
SAMMSON-210ENST00000641260 ERBB3P21860 1342 aa8.82□□□□□ -1
SAMMSON-210ENST00000641260 DOK7Q18PE1 504 aa8.82□□□□□ -1
SAMMSON-210ENST00000641260 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
SAMMSON-210ENST00000641260 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
SAMMSON-210ENST00000641260 CIZ1Q9ULV3 898 aaPredicted RBP8.81□□□□□ -1
SAMMSON-210ENST00000641260 SPOCK2Q92563 424 aa8.79□□□□□ -1
SAMMSON-210ENST00000641260 DEKP35659 375 aaKnown RBP8.78□□□□□ -1
SAMMSON-210ENST00000641260 FGD1P98174 961 aa8.78□□□□□ -1
SAMMSON-210ENST00000641260 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
SAMMSON-210ENST00000641260 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
SAMMSON-210ENST00000641260 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
SAMMSON-210ENST00000641260 AMER1Q5JTC6 1135 aaPredicted RBP8.76□□□□□ -1.01
SAMMSON-210ENST00000641260 TIMELESSQ9UNS1 1208 aa8.76□□□□□ -1.01
SAMMSON-210ENST00000641260 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
SAMMSON-210ENST00000641260 RTN4Q9NQC3 1192 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-210ENST00000641260 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
SAMMSON-210ENST00000641260 EFCAB3Q8N7B9 438 aa8.74□□□□□ -1.01
SAMMSON-210ENST00000641260 FANCIQ9NVI1 1328 aa8.72□□□□□ -1.01
SAMMSON-210ENST00000641260 HMGXB3Q12766 1538 aa8.72□□□□□ -1.01
SAMMSON-210ENST00000641260 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
SAMMSON-210ENST00000641260 SMARCA2P51531 1590 aa8.72□□□□□ -1.01
SAMMSON-210ENST00000641260 ATAD2BQ9ULI0 1458 aa8.71□□□□□ -1.02
SAMMSON-210ENST00000641260 ZSWIM6Q9HCJ5 1215 aa8.71□□□□□ -1.02
SAMMSON-210ENST00000641260 SUPT16HQ9Y5B9 1047 aaKnown RBP8.71□□□□□ -1.02
SAMMSON-210ENST00000641260 TMEM92Q6UXU6 159 aa8.7□□□□□ -1.02
SAMMSON-210ENST00000641260 MICALL2Q8IY33 904 aa8.7□□□□□ -1.02
SAMMSON-210ENST00000641260 ZNF687Q8N1G0 1237 aa8.7□□□□□ -1.02
SAMMSON-210ENST00000641260 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
SAMMSON-210ENST00000641260 BAZ1AQ9NRL2 1556 aaPredicted RBP8.69□□□□□ -1.02
SAMMSON-210ENST00000641260 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
SAMMSON-210ENST00000641260 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
SAMMSON-210ENST00000641260 PEG3Q9GZU2 1588 aa8.67□□□□□ -1.02
SAMMSON-210ENST00000641260 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
SAMMSON-210ENST00000641260 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
SAMMSON-210ENST00000641260 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
SAMMSON-210ENST00000641260 CUX2O14529 1486 aa8.64□□□□□ -1.03
SAMMSON-210ENST00000641260 PTGER2P43116 358 aa8.64□□□□□ -1.03
SAMMSON-210ENST00000641260 AAMPQ13685 434 aa8.64□□□□□ -1.03
SAMMSON-210ENST00000641260 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
SAMMSON-210ENST00000641260 RBM19Q9Y4C8 960 aaKnown RBP8.64□□□□□ -1.03
SAMMSON-210ENST00000641260 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
SAMMSON-210ENST00000641260 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
SAMMSON-210ENST00000641260 NPM2Q86SE8 214 aaKnown RBP8.63□□□□□ -1.03
SAMMSON-210ENST00000641260 SOX12O15370 315 aa8.62□□□□□ -1.03
SAMMSON-210ENST00000641260 ERCC6Q03468 1493 aa8.62□□□□□ -1.03
SAMMSON-210ENST00000641260 ARSIQ5FYB1 569 aa8.61□□□□□ -1.03
SAMMSON-210ENST00000641260 MS4A4AQ96JQ5 239 aa8.61□□□□□ -1.03
SAMMSON-210ENST00000641260 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
SAMMSON-210ENST00000641260 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
SAMMSON-210ENST00000641260 MROH2BQ7Z745 1585 aa8.58□□□□□ -1.04
SAMMSON-210ENST00000641260 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
SAMMSON-210ENST00000641260 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
SAMMSON-210ENST00000641260 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
SAMMSON-210ENST00000641260 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
SAMMSON-210ENST00000641260 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
SAMMSON-210ENST00000641260 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
SAMMSON-210ENST00000641260 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.04
SAMMSON-210ENST00000641260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 LSM11P83369 360 aaKnown RBP eCLIP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 LAMC3Q9Y6N6 1575 aa8.55□□□□□ -1.04
SAMMSON-210ENST00000641260 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms