RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
PAX6-280ENST00000640872 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
PAX6-280ENST00000640872 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
PAX6-280ENST00000640872 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
PAX6-280ENST00000640872 ZBED9Q6R2W3 1325 aa18.83■□□□□ 0.6
PAX6-280ENST00000640872 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.6
PAX6-280ENST00000640872 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
PAX6-280ENST00000640872 ERICH6Q7L0X2 663 aa18.82■□□□□ 0.6
PAX6-280ENST00000640872 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
PAX6-280ENST00000640872 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
PAX6-280ENST00000640872 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
PAX6-280ENST00000640872 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
PAX6-280ENST00000640872 MIA2Q96PC5 1412 aa18.79■□□□□ 0.6
PAX6-280ENST00000640872 FBLN2P98095 1184 aa18.77■□□□□ 0.6
PAX6-280ENST00000640872 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
PAX6-280ENST00000640872 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
PAX6-280ENST00000640872 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.59
PAX6-280ENST00000640872 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
PAX6-280ENST00000640872 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
PAX6-280ENST00000640872 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
PAX6-280ENST00000640872 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
PAX6-280ENST00000640872 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
PAX6-280ENST00000640872 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
PAX6-280ENST00000640872 ANKRD30BQ9BXX2 1392 aa18.74■□□□□ 0.59
PAX6-280ENST00000640872 DISP1Q96F81 1524 aa18.74■□□□□ 0.59
PAX6-280ENST00000640872 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
PAX6-280ENST00000640872 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
PAX6-280ENST00000640872 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
PAX6-280ENST00000640872 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
PAX6-280ENST00000640872 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
PAX6-280ENST00000640872 FOXD1Q16676 465 aa18.71■□□□□ 0.59
PAX6-280ENST00000640872 ROCK1Q13464 1354 aa18.7■□□□□ 0.58
PAX6-280ENST00000640872 SMG6Q86US8 1419 aaKnown RBP18.68■□□□□ 0.58
PAX6-280ENST00000640872 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
PAX6-280ENST00000640872 DAPK1P53355 1430 aa18.67■□□□□ 0.58
PAX6-280ENST00000640872 CEP170Q5SW79 1584 aa18.66■□□□□ 0.58
PAX6-280ENST00000640872 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
PAX6-280ENST00000640872 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
PAX6-280ENST00000640872 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
PAX6-280ENST00000640872 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
PAX6-280ENST00000640872 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
PAX6-280ENST00000640872 ABCC5O15440 1437 aa18.62■□□□□ 0.57
PAX6-280ENST00000640872 NUP153P49790 1475 aaKnown RBP18.62■□□□□ 0.57
PAX6-280ENST00000640872 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
PAX6-280ENST00000640872 MBD5Q9P267 1494 aa18.6■□□□□ 0.57
PAX6-280ENST00000640872 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
PAX6-280ENST00000640872 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
PAX6-280ENST00000640872 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
PAX6-280ENST00000640872 PLB1Q6P1J6 1458 aa18.58■□□□□ 0.57
PAX6-280ENST00000640872 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.56
PAX6-280ENST00000640872 PZPP20742 1482 aa18.57■□□□□ 0.56
PAX6-280ENST00000640872 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
PAX6-280ENST00000640872 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
PAX6-280ENST00000640872 NUP160Q12769 1436 aa18.55■□□□□ 0.56
PAX6-280ENST00000640872 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
PAX6-280ENST00000640872 PAK3O75914 559 aaPredicted RBP18.54■□□□□ 0.56
PAX6-280ENST00000640872 KIF14Q15058 1648 aa18.54■□□□□ 0.56
PAX6-280ENST00000640872 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
PAX6-280ENST00000640872 KDM5CP41229 1560 aa18.53■□□□□ 0.56
PAX6-280ENST00000640872 USP47Q96K76 1375 aa18.52■□□□□ 0.56
PAX6-280ENST00000640872 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
PAX6-280ENST00000640872 CCDC136Q96JN2 1154 aa18.5■□□□□ 0.55
PAX6-280ENST00000640872 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
PAX6-280ENST00000640872 KIAA1107Q9UPP5 1409 aa18.48■□□□□ 0.55
PAX6-280ENST00000640872 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
PAX6-280ENST00000640872 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
PAX6-280ENST00000640872 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
PAX6-280ENST00000640872 ANP32AP39687 249 aaKnown RBP18.46■□□□□ 0.55
PAX6-280ENST00000640872 NBR1Q14596 966 aa18.46■□□□□ 0.55
PAX6-280ENST00000640872 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
PAX6-280ENST00000640872 CAMSAP2Q08AD1 1489 aa18.45■□□□□ 0.54
PAX6-280ENST00000640872 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
PAX6-280ENST00000640872 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
PAX6-280ENST00000640872 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
PAX6-280ENST00000640872 CROCC2H7BZ55 1655 aa18.43■□□□□ 0.54
PAX6-280ENST00000640872 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
PAX6-280ENST00000640872 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
PAX6-280ENST00000640872 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
PAX6-280ENST00000640872 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
PAX6-280ENST00000640872 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
PAX6-280ENST00000640872 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
PAX6-280ENST00000640872 CFDP1Q9UEE9 299 aaPredicted RBP18.4■□□□□ 0.54
PAX6-280ENST00000640872 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
PAX6-280ENST00000640872 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
PAX6-280ENST00000640872 ZNF326Q5BKZ1 582 aaKnown RBP18.38■□□□□ 0.53
PAX6-280ENST00000640872 E9PCH4 1651 aa18.38■□□□□ 0.53
PAX6-280ENST00000640872 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
PAX6-280ENST00000640872 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
PAX6-280ENST00000640872 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
PAX6-280ENST00000640872 PKD2Q13563 968 aa18.37■□□□□ 0.53
PAX6-280ENST00000640872 BRD4O60885 1362 aaPredicted RBP18.37■□□□□ 0.53
PAX6-280ENST00000640872 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
PAX6-280ENST00000640872 ATP10BO94823 1461 aa18.36■□□□□ 0.53
PAX6-280ENST00000640872 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
PAX6-280ENST00000640872 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
PAX6-280ENST00000640872 ABCA8O94911 1581 aa18.35■□□□□ 0.53
PAX6-280ENST00000640872 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
PAX6-280ENST00000640872 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
PAX6-280ENST00000640872 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.53
PAX6-280ENST00000640872 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms