RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
GFAP-238ENST00000640859 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
GFAP-238ENST00000640859 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
GFAP-238ENST00000640859 PTPRKQ15262 1439 aa16.59■□□□□ 0.25
GFAP-238ENST00000640859 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
GFAP-238ENST00000640859 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
GFAP-238ENST00000640859 FAM69CQ0P6D2 419 aa16.57■□□□□ 0.24
GFAP-238ENST00000640859 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
GFAP-238ENST00000640859 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
GFAP-238ENST00000640859 ATP10BO94823 1461 aa16.55■□□□□ 0.24
GFAP-238ENST00000640859 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
GFAP-238ENST00000640859 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
GFAP-238ENST00000640859 WDR7Q9Y4E6 1490 aa16.54■□□□□ 0.24
GFAP-238ENST00000640859 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
GFAP-238ENST00000640859 ABCC10Q5T3U5 1492 aa16.53■□□□□ 0.24
GFAP-238ENST00000640859 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
GFAP-238ENST00000640859 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
GFAP-238ENST00000640859 NAIPQ13075 1403 aa16.49■□□□□ 0.23
GFAP-238ENST00000640859 AKNAQ7Z591 1439 aa16.46■□□□□ 0.23
GFAP-238ENST00000640859 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
GFAP-238ENST00000640859 GCC2Q8IWJ2 1684 aa16.45■□□□□ 0.22
GFAP-238ENST00000640859 DIP2BQ9P265 1576 aa16.44■□□□□ 0.22
GFAP-238ENST00000640859 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
GFAP-238ENST00000640859 KIF14Q15058 1648 aa16.43■□□□□ 0.22
GFAP-238ENST00000640859 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
GFAP-238ENST00000640859 GPATCH8Q9UKJ3 1502 aaKnown RBP16.42■□□□□ 0.22
GFAP-238ENST00000640859 GLI2P10070 1586 aa16.42■□□□□ 0.22
GFAP-238ENST00000640859 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
GFAP-238ENST00000640859 ABCC5O15440 1437 aa16.4■□□□□ 0.22
GFAP-238ENST00000640859 DAPK1P53355 1430 aa16.4■□□□□ 0.22
GFAP-238ENST00000640859 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
GFAP-238ENST00000640859 TEX14Q8IWB6 1497 aa16.4■□□□□ 0.22
GFAP-238ENST00000640859 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
GFAP-238ENST00000640859 RRP7BPQ9NSQ0 103 aa16.38■□□□□ 0.21
GFAP-238ENST00000640859 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
GFAP-238ENST00000640859 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
GFAP-238ENST00000640859 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
GFAP-238ENST00000640859 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
GFAP-238ENST00000640859 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
GFAP-238ENST00000640859 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
GFAP-238ENST00000640859 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
GFAP-238ENST00000640859 KDM6BO15054 1643 aa16.34■□□□□ 0.21
GFAP-238ENST00000640859 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
GFAP-238ENST00000640859 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.21
GFAP-238ENST00000640859 ABCA9Q8IUA7 1624 aa16.31■□□□□ 0.2
GFAP-238ENST00000640859 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
GFAP-238ENST00000640859 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
GFAP-238ENST00000640859 NEUROD1Q13562 356 aa16.3■□□□□ 0.2
GFAP-238ENST00000640859 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
GFAP-238ENST00000640859 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
GFAP-238ENST00000640859 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
GFAP-238ENST00000640859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
GFAP-238ENST00000640859 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
GFAP-238ENST00000640859 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
GFAP-238ENST00000640859 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
GFAP-238ENST00000640859 PLCH2O75038 1416 aa16.27■□□□□ 0.19
GFAP-238ENST00000640859 FANCAO15360 1455 aa16.25■□□□□ 0.19
GFAP-238ENST00000640859 NEO1Q92859 1461 aa16.25■□□□□ 0.19
GFAP-238ENST00000640859 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
GFAP-238ENST00000640859 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
GFAP-238ENST00000640859 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
GFAP-238ENST00000640859 PREX2Q70Z35 1606 aa16.24■□□□□ 0.19
GFAP-238ENST00000640859 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
GFAP-238ENST00000640859 CFAP74Q9C0B2 1584 aa16.24■□□□□ 0.19
GFAP-238ENST00000640859 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
GFAP-238ENST00000640859 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
GFAP-238ENST00000640859 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
GFAP-238ENST00000640859 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
GFAP-238ENST00000640859 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
GFAP-238ENST00000640859 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
GFAP-238ENST00000640859 ARAP3Q8WWN8 1544 aa16.22■□□□□ 0.19
GFAP-238ENST00000640859 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.19
GFAP-238ENST00000640859 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
GFAP-238ENST00000640859 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
GFAP-238ENST00000640859 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
GFAP-238ENST00000640859 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
GFAP-238ENST00000640859 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
GFAP-238ENST00000640859 ADGRL1O94910 1474 aa16.17■□□□□ 0.18
GFAP-238ENST00000640859 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
GFAP-238ENST00000640859 C9orf84Q5VXU9 1444 aa16.17■□□□□ 0.18
GFAP-238ENST00000640859 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
GFAP-238ENST00000640859 PZPP20742 1482 aa16.16■□□□□ 0.18
GFAP-238ENST00000640859 PPRC1Q5VV67 1664 aaKnown RBP16.15■□□□□ 0.18
GFAP-238ENST00000640859 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
GFAP-238ENST00000640859 MIER1Q8N108 512 aa16.15■□□□□ 0.18
GFAP-238ENST00000640859 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
GFAP-238ENST00000640859 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
GFAP-238ENST00000640859 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.17
GFAP-238ENST00000640859 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
GFAP-238ENST00000640859 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
GFAP-238ENST00000640859 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
GFAP-238ENST00000640859 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
GFAP-238ENST00000640859 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
GFAP-238ENST00000640859 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
GFAP-238ENST00000640859 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
GFAP-238ENST00000640859 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
GFAP-238ENST00000640859 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
GFAP-238ENST00000640859 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
GFAP-238ENST00000640859 RPRD2Q5VT52 1461 aaKnown RBP16.08■□□□□ 0.16
GFAP-238ENST00000640859 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms