RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 SCAPERQ9BY12 1400 aa32.56■■■□□ 2.8
GABRD-216ENST00000640688 MYO5CQ9NQX4 1742 aa32.54■■■□□ 2.8
GABRD-216ENST00000640688 POGZQ7Z3K3 1410 aa32.53■■■□□ 2.8
GABRD-216ENST00000640688 MAGI2Q86UL8 1455 aa32.49■■■□□ 2.79
GABRD-216ENST00000640688 CDK11AQ9UQ88 783 aaPredicted RBP32.48■■■□□ 2.79
GABRD-216ENST00000640688 PCF11O94913 1555 aaKnown RBP32.47■■■□□ 2.79
GABRD-216ENST00000640688 TROQ12816 1431 aaPredicted RBP32.47■■■□□ 2.79
GABRD-216ENST00000640688 LMTK3Q96Q04 1460 aa32.46■■■□□ 2.79
GABRD-216ENST00000640688 EFCAB2Q5VUJ9 269 aa32.45■■■□□ 2.79
GABRD-216ENST00000640688 PLPPR3Q6T4P5 718 aa32.44■■■□□ 2.78
GABRD-216ENST00000640688 MLECQ14165 292 aa32.43■■■□□ 2.78
GABRD-216ENST00000640688 ARHGAP5Q13017 1502 aa32.4■■■□□ 2.78
GABRD-216ENST00000640688 ATP10AO60312 1499 aa32.37■■■□□ 2.77
GABRD-216ENST00000640688 CLIP1P30622 1438 aa32.37■■■□□ 2.77
GABRD-216ENST00000640688 FER1L4A9Z1Z3 1794 aa32.37■■■□□ 2.77
GABRD-216ENST00000640688 CDC42BPBQ9Y5S2 1711 aa32.36■■■□□ 2.77
GABRD-216ENST00000640688 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
GABRD-216ENST00000640688 CASKIN1Q8WXD9 1431 aa32.34■■■□□ 2.77
GABRD-216ENST00000640688 C9orf84Q5VXU9 1444 aa32.33■■■□□ 2.77
GABRD-216ENST00000640688 ZNF518AQ6AHZ1 1483 aa32.32■■■□□ 2.76
GABRD-216ENST00000640688 HSPA2P54652 639 aa32.32■■■□□ 2.76
GABRD-216ENST00000640688 KDM5CP41229 1560 aa32.31■■■□□ 2.76
GABRD-216ENST00000640688 ARHGEF12Q9NZN5 1544 aa32.3■■■□□ 2.76
GABRD-216ENST00000640688 CCDC18Q5T9S5 1454 aa32.28■■■□□ 2.76
GABRD-216ENST00000640688 PREX2Q70Z35 1606 aa32.26■■■□□ 2.76
GABRD-216ENST00000640688 DIP2CQ9Y2E4 1556 aa32.24■■■□□ 2.75
GABRD-216ENST00000640688 ABCC1P33527 1531 aa32.21■■■□□ 2.75
GABRD-216ENST00000640688 CDC42BPAQ5VT25 1732 aa32.2■■■□□ 2.75
GABRD-216ENST00000640688 TRAPPC8Q9Y2L5 1435 aa32.2■■■□□ 2.75
GABRD-216ENST00000640688 ABCA6Q8N139 1617 aa32.2■■■□□ 2.75
GABRD-216ENST00000640688 MYT1LQ9UL68 1186 aa32.2■■■□□ 2.75
GABRD-216ENST00000640688 FYCO1Q9BQS8 1478 aa32.19■■■□□ 2.74
GABRD-216ENST00000640688 CEBPAP49715 358 aaPredicted RBP32.19■■■□□ 2.74
GABRD-216ENST00000640688 FBXO41Q8TF61 875 aa32.19■■■□□ 2.74
GABRD-216ENST00000640688 ITSN2Q9NZM3 1697 aa32.18■■■□□ 2.74
GABRD-216ENST00000640688 MLH3Q9UHC1 1453 aa32.15■■■□□ 2.74
GABRD-216ENST00000640688 REREQ9P2R6 1566 aa32.12■■■□□ 2.73
GABRD-216ENST00000640688 PREX1Q8TCU6 1659 aa32.09■■■□□ 2.73
GABRD-216ENST00000640688 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
GABRD-216ENST00000640688 SAMD9LQ8IVG5 1584 aa32.07■■■□□ 2.72
GABRD-216ENST00000640688 ZNF777Q9ULD5 760 aaPredicted RBP32.05■■■□□ 2.72
GABRD-216ENST00000640688 GPATCH8Q9UKJ3 1502 aaKnown RBP32.04■■■□□ 2.72
GABRD-216ENST00000640688 AGLP35573 1532 aa32.02■■■□□ 2.72
GABRD-216ENST00000640688 SYCP2Q9BX26 1530 aa32.01■■■□□ 2.72
GABRD-216ENST00000640688 C3P01024 1663 aa32■■■□□ 2.71
GABRD-216ENST00000640688 HNRNPMP52272 730 aaKnown RBP eCLIP31.97■■■□□ 2.71
GABRD-216ENST00000640688 STRCQ7RTU9 1775 aa31.95■■■□□ 2.71
GABRD-216ENST00000640688 SETD1BQ9UPS6 1966 aaKnown RBP31.94■■■□□ 2.7
GABRD-216ENST00000640688 UHRF1BP1Q6BDS2 1440 aa31.92■■■□□ 2.7
GABRD-216ENST00000640688 CFDP1Q9UEE9 299 aaPredicted RBP31.89■■■□□ 2.7
GABRD-216ENST00000640688 SPAG9O60271 1321 aaKnown RBP31.89■■■□□ 2.7
GABRD-216ENST00000640688 CCNB3Q8WWL7 1395 aa31.89■■■□□ 2.7
GABRD-216ENST00000640688 CERKQ8TCT0 537 aa31.88■■■□□ 2.69
GABRD-216ENST00000640688 MTUS2Q5JR59 1369 aa31.88■■■□□ 2.69
GABRD-216ENST00000640688 SUPT6HQ7KZ85 1726 aaKnown RBP31.87■■■□□ 2.69
GABRD-216ENST00000640688 ESF1Q9H501 851 aaKnown RBP31.87■■■□□ 2.69
GABRD-216ENST00000640688 ATP7AQ04656 1500 aa31.85■■■□□ 2.69
GABRD-216ENST00000640688 KIAA1107Q9UPP5 1409 aa31.85■■■□□ 2.69
GABRD-216ENST00000640688 INO80Q9ULG1 1556 aaPredicted RBP31.84■■■□□ 2.69
GABRD-216ENST00000640688 TIAM1Q13009 1591 aa31.82■■■□□ 2.68
GABRD-216ENST00000640688 ZNF644Q9H582 1327 aaPredicted RBP31.81■■■□□ 2.68
GABRD-216ENST00000640688 PLEKHH2Q8IVE3 1493 aa31.81■■■□□ 2.68
GABRD-216ENST00000640688 CNTLNQ9NXG0 1405 aa31.81■■■□□ 2.68
GABRD-216ENST00000640688 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
GABRD-216ENST00000640688 PLXNC1O60486 1568 aa31.79■■■□□ 2.68
GABRD-216ENST00000640688 EHBP1L1Q8N3D4 1523 aa31.77■■■□□ 2.68
GABRD-216ENST00000640688 MROH2AA6NES4 1674 aa31.76■■■□□ 2.68
GABRD-216ENST00000640688 A2MP01023 1474 aa31.76■■■□□ 2.67
GABRD-216ENST00000640688 DMRT2Q9Y5R5 561 aa31.74■■■□□ 2.67
GABRD-216ENST00000640688 CLTCQ00610 1675 aaKnown RBP31.73■■■□□ 2.67
GABRD-216ENST00000640688 ZMYM3Q14202 1370 aa31.73■■■□□ 2.67
GABRD-216ENST00000640688 MBD5Q9P267 1494 aa31.72■■■□□ 2.67
GABRD-216ENST00000640688 NPATQ14207 1427 aa31.67■■■□□ 2.66
GABRD-216ENST00000640688 ADGBQ8N7X0 1667 aa31.67■■■□□ 2.66
GABRD-216ENST00000640688 GGT6Q6P531 493 aa31.67■■■□□ 2.66
GABRD-216ENST00000640688 PTPRTO14522 1441 aa31.66■■■□□ 2.66
GABRD-216ENST00000640688 NCOA1Q15788 1441 aa31.66■■■□□ 2.66
GABRD-216ENST00000640688 NCOA2Q15596 1464 aa31.62■■■□□ 2.65
GABRD-216ENST00000640688 CAMSAP1Q5T5Y3 1602 aa31.62■■■□□ 2.65
GABRD-216ENST00000640688 PTPRKQ15262 1439 aa31.59■■■□□ 2.65
GABRD-216ENST00000640688 MYO3AQ8NEV4 1616 aa31.58■■■□□ 2.65
GABRD-216ENST00000640688 RTEL1-TNFRSF6BF6WH68 1400 aa31.58■■■□□ 2.65
GABRD-216ENST00000640688 LTBP4Q8N2S1 1624 aa31.57■■■□□ 2.64
GABRD-216ENST00000640688 CAMSAP2Q08AD1 1489 aa31.56■■■□□ 2.64
GABRD-216ENST00000640688 LOC105371045A0A1W2PR82 267 aa31.55■■■□□ 2.64
GABRD-216ENST00000640688 ZNF142P52746 1687 aaPredicted RBP31.54■■■□□ 2.64
GABRD-216ENST00000640688 DHX29Q7Z478 1369 aaKnown RBP31.54■■■□□ 2.64
GABRD-216ENST00000640688 NCKAP5LQ9HCH0 1330 aa31.53■■■□□ 2.64
GABRD-216ENST00000640688 CCDC141Q6ZP82 1450 aa31.52■■■□□ 2.64
GABRD-216ENST00000640688 CEP170BQ9Y4F5 1589 aaPredicted RBP31.51■■■□□ 2.64
GABRD-216ENST00000640688 PPP6R1Q9UPN7 881 aa31.49■■■□□ 2.63
GABRD-216ENST00000640688 KIF3BO15066 747 aa31.46■■■□□ 2.63
GABRD-216ENST00000640688 VPS8Q8N3P4 1428 aa31.45■■■□□ 2.63
GABRD-216ENST00000640688 LRRC9Q6ZRR7 1453 aa31.44■■■□□ 2.62
GABRD-216ENST00000640688 PLA2R1Q13018 1463 aa31.42■■■□□ 2.62
GABRD-216ENST00000640688 TCOF1Q13428 1488 aaKnown RBP31.41■■■□□ 2.62
GABRD-216ENST00000640688 ARHGEF5Q12774 1597 aa31.41■■■□□ 2.62
GABRD-216ENST00000640688 FBXO31Q5XUX0 539 aaPredicted RBP31.4■■■□□ 2.62
GABRD-216ENST00000640688 ZNF335Q9H4Z2 1342 aaPredicted RBP31.4■■■□□ 2.62
GABRD-216ENST00000640688 RSPH4AQ5TD94 716 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms