RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
RTTN-219ENST00000640525 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
RTTN-219ENST00000640525 PLB1Q6P1J6 1458 aa8.12□□□□□ -1.11
RTTN-219ENST00000640525 PRR29P0C7W0 189 aa8.11□□□□□ -1.11
RTTN-219ENST00000640525 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
RTTN-219ENST00000640525 ARHGEF11O15085 1522 aa8.1□□□□□ -1.11
RTTN-219ENST00000640525 CREBZFQ9NS37 354 aa8.09□□□□□ -1.11
RTTN-219ENST00000640525 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
RTTN-219ENST00000640525 RIMBP3CA6NJZ7 1639 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 RIMBP3BA6NNM3 1639 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 RIMBP3Q9UFD9 1639 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 RAPGEF6Q8TEU7 1601 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
RTTN-219ENST00000640525 CYB5RLQ6IPT4 315 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 KLHL34Q8N239 644 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
RTTN-219ENST00000640525 CDK13Q14004 1512 aaKnown RBP8.07□□□□□ -1.12
RTTN-219ENST00000640525 MNX1P50219 401 aaPredicted RBP8.07□□□□□ -1.12
RTTN-219ENST00000640525 ABCA8O94911 1581 aa8.07□□□□□ -1.12
RTTN-219ENST00000640525 LRRIQ1Q96JM4 1722 aa8.07□□□□□ -1.12
RTTN-219ENST00000640525 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
RTTN-219ENST00000640525 UACAQ9BZF9 1416 aa8.06□□□□□ -1.12
RTTN-219ENST00000640525 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
RTTN-219ENST00000640525 EPRSP07814 1512 aaKnown RBP8.05□□□□□ -1.12
RTTN-219ENST00000640525 TIAM1Q13009 1591 aa8.04□□□□□ -1.12
RTTN-219ENST00000640525 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
RTTN-219ENST00000640525 ABCC2Q92887 1545 aa8.03□□□□□ -1.12
RTTN-219ENST00000640525 ATP10BO94823 1461 aa8.03□□□□□ -1.12
RTTN-219ENST00000640525 FXR2P51116 673 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTTN-219ENST00000640525 LHX8Q68G74 356 aa8.03□□□□□ -1.12
RTTN-219ENST00000640525 ADCY10Q96PN6 1610 aa8.03□□□□□ -1.12
RTTN-219ENST00000640525 CFAP43Q8NDM7 1665 aa8.02□□□□□ -1.13
RTTN-219ENST00000640525 MAGI3Q5TCQ9 1506 aa8.02□□□□□ -1.13
RTTN-219ENST00000640525 PKD2Q13563 968 aa8.02□□□□□ -1.13
RTTN-219ENST00000640525 CCDC18Q5T9S5 1454 aa8.01□□□□□ -1.13
RTTN-219ENST00000640525 LRRC9Q6ZRR7 1453 aa8.01□□□□□ -1.13
RTTN-219ENST00000640525 MTUS2Q5JR59 1369 aa8.01□□□□□ -1.13
RTTN-219ENST00000640525 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
RTTN-219ENST00000640525 UHRF1BP1LA0JNW5 1464 aa8□□□□□ -1.13
RTTN-219ENST00000640525 ZCCHC11Q5TAX3 1644 aaKnown RBP8□□□□□ -1.13
RTTN-219ENST00000640525 PLEKHD1A6NEE1 506 aa7.99□□□□□ -1.13
RTTN-219ENST00000640525 NPM1P06748 294 aaKnown RBP eCLIP7.99□□□□□ -1.13
RTTN-219ENST00000640525 KCNH8Q96L42 1107 aa7.99□□□□□ -1.13
RTTN-219ENST00000640525 MAP3K1Q13233 1512 aa7.99□□□□□ -1.13
RTTN-219ENST00000640525 PRKAR2AP13861 404 aaKnown RBP7.99□□□□□ -1.13
RTTN-219ENST00000640525 KDM5BQ9UGL1 1544 aa7.98□□□□□ -1.13
RTTN-219ENST00000640525 SPOCK2Q92563 424 aa7.98□□□□□ -1.13
RTTN-219ENST00000640525 CDK11AQ9UQ88 783 aaPredicted RBP7.98□□□□□ -1.13
RTTN-219ENST00000640525 HAX1O00165 279 aa7.97□□□□□ -1.13
RTTN-219ENST00000640525 NUBP1P53384 320 aa7.96□□□□□ -1.13
RTTN-219ENST00000640525 TROQ12816 1431 aaPredicted RBP7.96□□□□□ -1.13
RTTN-219ENST00000640525 EHBP1L1Q8N3D4 1523 aa7.96□□□□□ -1.14
RTTN-219ENST00000640525 KIF14Q15058 1648 aa7.96□□□□□ -1.14
RTTN-219ENST00000640525 NCOA2Q15596 1464 aa7.96□□□□□ -1.14
RTTN-219ENST00000640525 ASXL2Q76L83 1435 aa7.95□□□□□ -1.14
RTTN-219ENST00000640525 PHLDB1Q86UU1 1377 aa7.95□□□□□ -1.14
RTTN-219ENST00000640525 RASEFQ8IZ41 740 aa7.95□□□□□ -1.14
RTTN-219ENST00000640525 SUPT6HQ7KZ85 1726 aaKnown RBP7.94□□□□□ -1.14
RTTN-219ENST00000640525 FARP1Q9Y4F1 1045 aaPredicted RBP7.93□□□□□ -1.14
RTTN-219ENST00000640525 PCGF6Q9BYE7 350 aa7.93□□□□□ -1.14
RTTN-219ENST00000640525 WDR7Q9Y4E6 1490 aa7.92□□□□□ -1.14
RTTN-219ENST00000640525 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
RTTN-219ENST00000640525 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
RTTN-219ENST00000640525 CIZ1Q9ULV3 898 aaPredicted RBP7.92□□□□□ -1.14
RTTN-219ENST00000640525 CCNB3Q8WWL7 1395 aa7.92□□□□□ -1.14
RTTN-219ENST00000640525 ITGAEP38570 1179 aa7.91□□□□□ -1.14
RTTN-219ENST00000640525 FAM50AQ14320 339 aaKnown RBP7.91□□□□□ -1.14
RTTN-219ENST00000640525 ZNF777Q9ULD5 760 aaPredicted RBP7.91□□□□□ -1.14
RTTN-219ENST00000640525 ABCC10Q5T3U5 1492 aa7.9□□□□□ -1.14
RTTN-219ENST00000640525 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.14
RTTN-219ENST00000640525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.9□□□□□ -1.14
RTTN-219ENST00000640525 ZNF644Q9H582 1327 aaPredicted RBP7.9□□□□□ -1.15
RTTN-219ENST00000640525 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.15
RTTN-219ENST00000640525 MAPKBP1O60336 1514 aa7.89□□□□□ -1.15
RTTN-219ENST00000640525 GPATCH8Q9UKJ3 1502 aaKnown RBP7.89□□□□□ -1.15
RTTN-219ENST00000640525 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
RTTN-219ENST00000640525 FGD6Q6ZV73 1430 aa7.88□□□□□ -1.15
RTTN-219ENST00000640525 FAM69CQ0P6D2 419 aa7.88□□□□□ -1.15
RTTN-219ENST00000640525 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
RTTN-219ENST00000640525 CDC42BPAQ5VT25 1732 aa7.87□□□□□ -1.15
RTTN-219ENST00000640525 RRBP1Q9P2E9 1410 aaKnown RBP7.87□□□□□ -1.15
RTTN-219ENST00000640525 RGL2O15211 777 aa7.87□□□□□ -1.15
RTTN-219ENST00000640525 TSPYL2Q9H2G4 693 aaPredicted RBP7.87□□□□□ -1.15
RTTN-219ENST00000640525 DCAF8Q5TAQ9 597 aa7.86□□□□□ -1.15
RTTN-219ENST00000640525 PTPN23Q9H3S7 1636 aa7.86□□□□□ -1.15
RTTN-219ENST00000640525 ARHGAP5Q13017 1502 aa7.86□□□□□ -1.15
RTTN-219ENST00000640525 ECM2O94769 699 aaPredicted RBP7.85□□□□□ -1.15
RTTN-219ENST00000640525 MYO5CQ9NQX4 1742 aa7.85□□□□□ -1.15
RTTN-219ENST00000640525 CDC42BPBQ9Y5S2 1711 aa7.85□□□□□ -1.15
RTTN-219ENST00000640525 CD109Q6YHK3 1445 aa7.85□□□□□ -1.15
RTTN-219ENST00000640525 HNRNPMP52272 730 aaKnown RBP eCLIP7.85□□□□□ -1.15
RTTN-219ENST00000640525 ABCA9Q8IUA7 1624 aa7.85□□□□□ -1.15
RTTN-219ENST00000640525 ITSN2Q9NZM3 1697 aa7.85□□□□□ -1.15
RTTN-219ENST00000640525 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
RTTN-219ENST00000640525 PLCH2O75038 1416 aa7.84□□□□□ -1.15
RTTN-219ENST00000640525 PREX2Q70Z35 1606 aa7.84□□□□□ -1.15
RTTN-219ENST00000640525 RNF25Q96BH1 459 aaPredicted RBP7.84□□□□□ -1.15
RTTN-219ENST00000640525 MIA2Q96PC5 1412 aa7.84□□□□□ -1.15
RTTN-219ENST00000640525 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms