RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 PREX2Q70Z35 1606 aa19.83■□□□□ 0.76
PAX6-272ENST00000640460 ARHGAP5Q13017 1502 aa19.81■□□□□ 0.76
PAX6-272ENST00000640460 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
PAX6-272ENST00000640460 SCAPERQ9BY12 1400 aa19.79■□□□□ 0.76
PAX6-272ENST00000640460 ARHGEF40Q8TER5 1519 aa19.78■□□□□ 0.76
PAX6-272ENST00000640460 EFCAB2Q5VUJ9 269 aa19.78■□□□□ 0.76
PAX6-272ENST00000640460 TIAM1Q13009 1591 aa19.77■□□□□ 0.76
PAX6-272ENST00000640460 POGZQ7Z3K3 1410 aa19.77■□□□□ 0.75
PAX6-272ENST00000640460 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
PAX6-272ENST00000640460 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
PAX6-272ENST00000640460 ITSN2Q9NZM3 1697 aa19.72■□□□□ 0.75
PAX6-272ENST00000640460 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
PAX6-272ENST00000640460 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
PAX6-272ENST00000640460 SIGLEC1Q9BZZ2 1709 aa19.72■□□□□ 0.75
PAX6-272ENST00000640460 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
PAX6-272ENST00000640460 ABCC1P33527 1531 aa19.71■□□□□ 0.75
PAX6-272ENST00000640460 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
PAX6-272ENST00000640460 KDM5CP41229 1560 aa19.7■□□□□ 0.74
PAX6-272ENST00000640460 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
PAX6-272ENST00000640460 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
PAX6-272ENST00000640460 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
PAX6-272ENST00000640460 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
PAX6-272ENST00000640460 ARHGEF12Q9NZN5 1544 aa19.69■□□□□ 0.74
PAX6-272ENST00000640460 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
PAX6-272ENST00000640460 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
PAX6-272ENST00000640460 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
PAX6-272ENST00000640460 HECW2Q9P2P5 1572 aa19.65■□□□□ 0.74
PAX6-272ENST00000640460 APLP2Q06481 763 aa19.65■□□□□ 0.74
PAX6-272ENST00000640460 AFAP1Q8N556 730 aa19.65■□□□□ 0.74
PAX6-272ENST00000640460 TRAPPC8Q9Y2L5 1435 aa19.64■□□□□ 0.73
PAX6-272ENST00000640460 SUPT6HQ7KZ85 1726 aaKnown RBP19.64■□□□□ 0.73
PAX6-272ENST00000640460 CCNB3Q8WWL7 1395 aa19.64■□□□□ 0.73
PAX6-272ENST00000640460 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
PAX6-272ENST00000640460 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
PAX6-272ENST00000640460 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
PAX6-272ENST00000640460 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
PAX6-272ENST00000640460 ABCA6Q8N139 1617 aa19.6■□□□□ 0.73
PAX6-272ENST00000640460 DIP2CQ9Y2E4 1556 aa19.6■□□□□ 0.73
PAX6-272ENST00000640460 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
PAX6-272ENST00000640460 ATP10AO60312 1499 aa19.6■□□□□ 0.73
PAX6-272ENST00000640460 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
PAX6-272ENST00000640460 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
PAX6-272ENST00000640460 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
PAX6-272ENST00000640460 C9orf84Q5VXU9 1444 aa19.58■□□□□ 0.73
PAX6-272ENST00000640460 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
PAX6-272ENST00000640460 KIAA1107Q9UPP5 1409 aa19.56■□□□□ 0.72
PAX6-272ENST00000640460 PLEKHH2Q8IVE3 1493 aa19.55■□□□□ 0.72
PAX6-272ENST00000640460 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
PAX6-272ENST00000640460 PTPRMP28827 1452 aa19.54■□□□□ 0.72
PAX6-272ENST00000640460 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
PAX6-272ENST00000640460 FER1L4A9Z1Z3 1794 aa19.53■□□□□ 0.72
PAX6-272ENST00000640460 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
PAX6-272ENST00000640460 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
PAX6-272ENST00000640460 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
PAX6-272ENST00000640460 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
PAX6-272ENST00000640460 ATP7AQ04656 1500 aa19.49■□□□□ 0.71
PAX6-272ENST00000640460 MLECQ14165 292 aa19.48■□□□□ 0.71
PAX6-272ENST00000640460 CAMSAP2Q08AD1 1489 aa19.47■□□□□ 0.71
PAX6-272ENST00000640460 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
PAX6-272ENST00000640460 AGLP35573 1532 aa19.46■□□□□ 0.71
PAX6-272ENST00000640460 MYOM3Q5VTT5 1437 aa19.45■□□□□ 0.7
PAX6-272ENST00000640460 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
PAX6-272ENST00000640460 ADGBQ8N7X0 1667 aa19.42■□□□□ 0.7
PAX6-272ENST00000640460 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
PAX6-272ENST00000640460 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
PAX6-272ENST00000640460 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
PAX6-272ENST00000640460 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
PAX6-272ENST00000640460 A2MP01023 1474 aa19.38■□□□□ 0.69
PAX6-272ENST00000640460 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
PAX6-272ENST00000640460 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
PAX6-272ENST00000640460 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
PAX6-272ENST00000640460 C3P01024 1663 aa19.35■□□□□ 0.69
PAX6-272ENST00000640460 PTPN23Q9H3S7 1636 aa19.35■□□□□ 0.69
PAX6-272ENST00000640460 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
PAX6-272ENST00000640460 LMTK3Q96Q04 1460 aa19.33■□□□□ 0.68
PAX6-272ENST00000640460 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
PAX6-272ENST00000640460 TCOF1Q13428 1488 aaKnown RBP19.31■□□□□ 0.68
PAX6-272ENST00000640460 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
PAX6-272ENST00000640460 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
PAX6-272ENST00000640460 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
PAX6-272ENST00000640460 CROCC2H7BZ55 1655 aa19.29■□□□□ 0.68
PAX6-272ENST00000640460 CLTCQ00610 1675 aaKnown RBP19.29■□□□□ 0.68
PAX6-272ENST00000640460 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
PAX6-272ENST00000640460 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
PAX6-272ENST00000640460 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
PAX6-272ENST00000640460 CNTLNQ9NXG0 1405 aa19.26■□□□□ 0.67
PAX6-272ENST00000640460 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
PAX6-272ENST00000640460 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
PAX6-272ENST00000640460 SETD1BQ9UPS6 1966 aaKnown RBP19.25■□□□□ 0.67
PAX6-272ENST00000640460 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
PAX6-272ENST00000640460 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
PAX6-272ENST00000640460 GGT6Q6P531 493 aa19.23■□□□□ 0.67
PAX6-272ENST00000640460 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
PAX6-272ENST00000640460 ABCC5O15440 1437 aa19.22■□□□□ 0.67
PAX6-272ENST00000640460 SHANK2Q9UPX8 1470 aa19.21■□□□□ 0.67
PAX6-272ENST00000640460 DAPK1P53355 1430 aa19.2■□□□□ 0.66
PAX6-272ENST00000640460 KIF3BO15066 747 aa19.2■□□□□ 0.66
PAX6-272ENST00000640460 HSPA2P54652 639 aa19.2■□□□□ 0.66
PAX6-272ENST00000640460 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
PAX6-272ENST00000640460 ZMYM3Q14202 1370 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms