RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 ABCA9Q8IUA7 1624 aa22.44■■□□□ 1.18
PAX6-271ENST00000640431 CD109Q6YHK3 1445 aa22.44■■□□□ 1.18
PAX6-271ENST00000640431 MIER1Q8N108 512 aa22.43■■□□□ 1.18
PAX6-271ENST00000640431 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
PAX6-271ENST00000640431 GTF3C3Q9Y5Q9 886 aa22.42■■□□□ 1.18
PAX6-271ENST00000640431 NCOA2Q15596 1464 aa22.37■■□□□ 1.17
PAX6-271ENST00000640431 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
PAX6-271ENST00000640431 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
PAX6-271ENST00000640431 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
PAX6-271ENST00000640431 MYO5CQ9NQX4 1742 aa22.33■■□□□ 1.17
PAX6-271ENST00000640431 ITGAEP38570 1179 aa22.33■■□□□ 1.16
PAX6-271ENST00000640431 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.16
PAX6-271ENST00000640431 CDC42BPBQ9Y5S2 1711 aa22.31■■□□□ 1.16
PAX6-271ENST00000640431 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
PAX6-271ENST00000640431 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
PAX6-271ENST00000640431 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
PAX6-271ENST00000640431 PLCH2O75038 1416 aa22.29■■□□□ 1.16
PAX6-271ENST00000640431 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
PAX6-271ENST00000640431 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
PAX6-271ENST00000640431 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
PAX6-271ENST00000640431 FANCAO15360 1455 aa22.28■■□□□ 1.16
PAX6-271ENST00000640431 COL17A1Q9UMD9 1497 aaPredicted RBP22.27■■□□□ 1.16
PAX6-271ENST00000640431 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.15
PAX6-271ENST00000640431 TEX14Q8IWB6 1497 aa22.23■■□□□ 1.15
PAX6-271ENST00000640431 CFDP1Q9UEE9 299 aaPredicted RBP22.23■■□□□ 1.15
PAX6-271ENST00000640431 AKNAQ7Z591 1439 aa22.21■■□□□ 1.15
PAX6-271ENST00000640431 RAPGEF3O95398 923 aa22.2■■□□□ 1.14
PAX6-271ENST00000640431 EFCAB2Q5VUJ9 269 aa22.2■■□□□ 1.14
PAX6-271ENST00000640431 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
PAX6-271ENST00000640431 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
PAX6-271ENST00000640431 KDM6BO15054 1643 aa22.18■■□□□ 1.14
PAX6-271ENST00000640431 ITSN2Q9NZM3 1697 aa22.18■■□□□ 1.14
PAX6-271ENST00000640431 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
PAX6-271ENST00000640431 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
PAX6-271ENST00000640431 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
PAX6-271ENST00000640431 NEO1Q92859 1461 aa22.16■■□□□ 1.14
PAX6-271ENST00000640431 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.14
PAX6-271ENST00000640431 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
PAX6-271ENST00000640431 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
PAX6-271ENST00000640431 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
PAX6-271ENST00000640431 SYCP2Q9BX26 1530 aa22.14■■□□□ 1.13
PAX6-271ENST00000640431 CFAP74Q9C0B2 1584 aa22.13■■□□□ 1.13
PAX6-271ENST00000640431 ABCC1P33527 1531 aa22.13■■□□□ 1.13
PAX6-271ENST00000640431 CAMSAP2Q08AD1 1489 aa22.12■■□□□ 1.13
PAX6-271ENST00000640431 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
PAX6-271ENST00000640431 AFAP1Q8N556 730 aa22.11■■□□□ 1.13
PAX6-271ENST00000640431 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
PAX6-271ENST00000640431 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
PAX6-271ENST00000640431 PTPN23Q9H3S7 1636 aa22.08■■□□□ 1.13
PAX6-271ENST00000640431 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.13
PAX6-271ENST00000640431 RICTORQ6R327 1708 aa22.07■■□□□ 1.12
PAX6-271ENST00000640431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.06■■□□□ 1.12
PAX6-271ENST00000640431 POGZQ7Z3K3 1410 aa22.06■■□□□ 1.12
PAX6-271ENST00000640431 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
PAX6-271ENST00000640431 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
PAX6-271ENST00000640431 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
PAX6-271ENST00000640431 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
PAX6-271ENST00000640431 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
PAX6-271ENST00000640431 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
PAX6-271ENST00000640431 TCOF1Q13428 1488 aaKnown RBP21.98■■□□□ 1.11
PAX6-271ENST00000640431 ZNF518AQ6AHZ1 1483 aa21.97■■□□□ 1.11
PAX6-271ENST00000640431 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
PAX6-271ENST00000640431 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
PAX6-271ENST00000640431 KDM5CP41229 1560 aa21.95■■□□□ 1.1
PAX6-271ENST00000640431 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
PAX6-271ENST00000640431 ABCC5O15440 1437 aa21.93■■□□□ 1.1
PAX6-271ENST00000640431 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
PAX6-271ENST00000640431 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
PAX6-271ENST00000640431 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
PAX6-271ENST00000640431 PTPRKQ15262 1439 aa21.91■■□□□ 1.1
PAX6-271ENST00000640431 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
PAX6-271ENST00000640431 HECW2Q9P2P5 1572 aa21.91■■□□□ 1.1
PAX6-271ENST00000640431 DAPK1P53355 1430 aa21.91■■□□□ 1.1
PAX6-271ENST00000640431 DNMT1P26358 1616 aaKnown RBP21.89■■□□□ 1.1
PAX6-271ENST00000640431 ABCA6Q8N139 1617 aa21.89■■□□□ 1.1
PAX6-271ENST00000640431 ZFYVE16Q7Z3T8 1539 aa21.89■■□□□ 1.1
PAX6-271ENST00000640431 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.1
PAX6-271ENST00000640431 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
PAX6-271ENST00000640431 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
PAX6-271ENST00000640431 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
PAX6-271ENST00000640431 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
PAX6-271ENST00000640431 C9orf84Q5VXU9 1444 aa21.86■■□□□ 1.09
PAX6-271ENST00000640431 ARHGEF40Q8TER5 1519 aa21.86■■□□□ 1.09
PAX6-271ENST00000640431 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
PAX6-271ENST00000640431 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
PAX6-271ENST00000640431 MLH3Q9UHC1 1453 aa21.85■■□□□ 1.09
PAX6-271ENST00000640431 TSPY4P0CV99 314 aa21.85■■□□□ 1.09
PAX6-271ENST00000640431 TSPY10P0CW01 314 aa21.85■■□□□ 1.09
PAX6-271ENST00000640431 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
PAX6-271ENST00000640431 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
PAX6-271ENST00000640431 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
PAX6-271ENST00000640431 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
PAX6-271ENST00000640431 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
PAX6-271ENST00000640431 NAIPQ13075 1403 aa21.78■■□□□ 1.08
PAX6-271ENST00000640431 MLECQ14165 292 aa21.78■■□□□ 1.08
PAX6-271ENST00000640431 ATP10AO60312 1499 aa21.78■■□□□ 1.08
PAX6-271ENST00000640431 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
PAX6-271ENST00000640431 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
PAX6-271ENST00000640431 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
PAX6-271ENST00000640431 RTEL1-TNFRSF6BF6WH68 1400 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms