RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 GGT6Q6P531 493 aa18.84■□□□□ 0.61
HNRNPU-226ENST00000640218 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.6
HNRNPU-226ENST00000640218 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
HNRNPU-226ENST00000640218 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
HNRNPU-226ENST00000640218 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
HNRNPU-226ENST00000640218 HSCBQ8IWL3 235 aa18.81■□□□□ 0.6
HNRNPU-226ENST00000640218 FOXD1Q16676 465 aa18.81■□□□□ 0.6
HNRNPU-226ENST00000640218 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
HNRNPU-226ENST00000640218 RTF1Q92541 710 aaKnown RBP18.81■□□□□ 0.6
HNRNPU-226ENST00000640218 SOGA1O94964 1423 aa18.8■□□□□ 0.6
HNRNPU-226ENST00000640218 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
HNRNPU-226ENST00000640218 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
HNRNPU-226ENST00000640218 PKD2Q13563 968 aa18.79■□□□□ 0.6
HNRNPU-226ENST00000640218 SPRYD3Q8NCJ5 442 aa18.79■□□□□ 0.6
HNRNPU-226ENST00000640218 GOLGA6L4A6NEF3 574 aa18.79■□□□□ 0.6
HNRNPU-226ENST00000640218 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
HNRNPU-226ENST00000640218 ZNF330Q9Y3S2 320 aaPredicted RBP18.78■□□□□ 0.6
HNRNPU-226ENST00000640218 SETD5Q9C0A6 1442 aa18.78■□□□□ 0.6
HNRNPU-226ENST00000640218 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
HNRNPU-226ENST00000640218 MSH5O43196 834 aa18.76■□□□□ 0.59
HNRNPU-226ENST00000640218 MCCP23508 829 aa18.76■□□□□ 0.59
HNRNPU-226ENST00000640218 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
HNRNPU-226ENST00000640218 CLSTN1O94985 981 aa18.76■□□□□ 0.59
HNRNPU-226ENST00000640218 APBB1O00213 710 aa18.75■□□□□ 0.59
HNRNPU-226ENST00000640218 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
HNRNPU-226ENST00000640218 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
HNRNPU-226ENST00000640218 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
HNRNPU-226ENST00000640218 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
HNRNPU-226ENST00000640218 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
HNRNPU-226ENST00000640218 NRDCO43847 1150 aa18.71■□□□□ 0.59
HNRNPU-226ENST00000640218 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
HNRNPU-226ENST00000640218 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
HNRNPU-226ENST00000640218 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.582e-8■■■□□ 17.8
HNRNPU-226ENST00000640218 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
HNRNPU-226ENST00000640218 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
HNRNPU-226ENST00000640218 IPO8O15397 1037 aaKnown RBP18.68■□□□□ 0.58
HNRNPU-226ENST00000640218 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 KIAA1211Q6ZU35 1233 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 ITPRIPQ8IWB1 547 aa18.65■□□□□ 0.58
HNRNPU-226ENST00000640218 DRC7Q8IY82 874 aa18.64■□□□□ 0.58
HNRNPU-226ENST00000640218 NUP155O75694 1391 aa18.64■□□□□ 0.57
HNRNPU-226ENST00000640218 GNL2Q13823 731 aaKnown RBP18.64■□□□□ 0.57
HNRNPU-226ENST00000640218 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
HNRNPU-226ENST00000640218 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
HNRNPU-226ENST00000640218 G3V3G9 751 aa18.63■□□□□ 0.57
HNRNPU-226ENST00000640218 DCAF8Q5TAQ9 597 aa18.63■□□□□ 0.57
HNRNPU-226ENST00000640218 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
HNRNPU-226ENST00000640218 CALD1Q05682 793 aaKnown RBP18.62■□□□□ 0.57
HNRNPU-226ENST00000640218 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
HNRNPU-226ENST00000640218 MSNP26038 577 aaKnown RBP18.6■□□□□ 0.57
HNRNPU-226ENST00000640218 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
HNRNPU-226ENST00000640218 RALBP1Q15311 655 aa18.6■□□□□ 0.57
HNRNPU-226ENST00000640218 EFCAB2Q5VUJ9 269 aa18.59■□□□□ 0.57
HNRNPU-226ENST00000640218 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
HNRNPU-226ENST00000640218 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.57
HNRNPU-226ENST00000640218 AMER1Q5JTC6 1135 aaPredicted RBP18.58■□□□□ 0.57
HNRNPU-226ENST00000640218 ANKRD30AQ9BXX3 1397 aa18.57■□□□□ 0.56
HNRNPU-226ENST00000640218 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
HNRNPU-226ENST00000640218 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
HNRNPU-226ENST00000640218 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
HNRNPU-226ENST00000640218 KIF3BO15066 747 aa18.56■□□□□ 0.56
HNRNPU-226ENST00000640218 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
HNRNPU-226ENST00000640218 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.562e-10■■□□□ 11.9
HNRNPU-226ENST00000640218 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
HNRNPU-226ENST00000640218 FMN1Q68DA7 1419 aa18.54■□□□□ 0.56
HNRNPU-226ENST00000640218 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
HNRNPU-226ENST00000640218 STK31Q9BXU1 1019 aa18.53■□□□□ 0.56
HNRNPU-226ENST00000640218 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
HNRNPU-226ENST00000640218 SMC4Q9NTJ3 1288 aa18.53■□□□□ 0.56
HNRNPU-226ENST00000640218 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
HNRNPU-226ENST00000640218 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
HNRNPU-226ENST00000640218 SLKQ9H2G2 1235 aaPredicted RBP18.52■□□□□ 0.56
HNRNPU-226ENST00000640218 GBP4Q96PP9 640 aa18.51■□□□□ 0.55
HNRNPU-226ENST00000640218 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
HNRNPU-226ENST00000640218 GZF1Q9H116 711 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-226ENST00000640218 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
HNRNPU-226ENST00000640218 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
HNRNPU-226ENST00000640218 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
HNRNPU-226ENST00000640218 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
HNRNPU-226ENST00000640218 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
HNRNPU-226ENST00000640218 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
HNRNPU-226ENST00000640218 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
HNRNPU-226ENST00000640218 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
HNRNPU-226ENST00000640218 CLUAP1Q96AJ1 413 aa18.48■□□□□ 0.55
HNRNPU-226ENST00000640218 KRI1Q8N9T8 703 aaKnown RBP18.48■□□□□ 0.55
HNRNPU-226ENST00000640218 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
HNRNPU-226ENST00000640218 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
HNRNPU-226ENST00000640218 NGDNQ8NEJ9 315 aaKnown RBP18.47■□□□□ 0.55
HNRNPU-226ENST00000640218 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
HNRNPU-226ENST00000640218 PPP1R1BQ9UD71 204 aaPredicted RBP18.46■□□□□ 0.55
HNRNPU-226ENST00000640218 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
HNRNPU-226ENST00000640218 WASHC2CQ9Y4E1 1318 aa18.46■□□□□ 0.55
HNRNPU-226ENST00000640218 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
HNRNPU-226ENST00000640218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.45■□□□□ 0.54
HNRNPU-226ENST00000640218 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
HNRNPU-226ENST00000640218 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
HNRNPU-226ENST00000640218 PTMSP20962 102 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms