RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
PAX6-259ENST00000639916 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
PAX6-259ENST00000639916 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
PAX6-259ENST00000639916 NUP160Q12769 1436 aa12.62□□□□□ -0.39
PAX6-259ENST00000639916 PTPRKQ15262 1439 aa12.61□□□□□ -0.39
PAX6-259ENST00000639916 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
PAX6-259ENST00000639916 NUP153P49790 1475 aaKnown RBP12.6□□□□□ -0.39
PAX6-259ENST00000639916 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
PAX6-259ENST00000639916 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
PAX6-259ENST00000639916 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
PAX6-259ENST00000639916 NEFLP07196 543 aa12.59□□□□□ -0.39
PAX6-259ENST00000639916 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
PAX6-259ENST00000639916 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
PAX6-259ENST00000639916 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
PAX6-259ENST00000639916 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
PAX6-259ENST00000639916 HFM1A2PYH4 1435 aa12.56□□□□□ -0.4
PAX6-259ENST00000639916 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
PAX6-259ENST00000639916 NBR1Q14596 966 aa12.56□□□□□ -0.4
PAX6-259ENST00000639916 TCOF1Q13428 1488 aaKnown RBP12.55□□□□□ -0.4
PAX6-259ENST00000639916 MIA2Q96PC5 1412 aa12.55□□□□□ -0.4
PAX6-259ENST00000639916 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
PAX6-259ENST00000639916 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
PAX6-259ENST00000639916 SIN3AQ96ST3 1273 aa12.54□□□□□ -0.4
PAX6-259ENST00000639916 NAIPQ13075 1403 aa12.53□□□□□ -0.4
PAX6-259ENST00000639916 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.4
PAX6-259ENST00000639916 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.41
PAX6-259ENST00000639916 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
PAX6-259ENST00000639916 UACAQ9BZF9 1416 aa12.49□□□□□ -0.41
PAX6-259ENST00000639916 ZNF644Q9H582 1327 aaPredicted RBP12.48□□□□□ -0.41
PAX6-259ENST00000639916 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
PAX6-259ENST00000639916 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
PAX6-259ENST00000639916 CHD1O14646 1710 aa12.47□□□□□ -0.41
PAX6-259ENST00000639916 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
PAX6-259ENST00000639916 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
PAX6-259ENST00000639916 ABCA8O94911 1581 aa12.46□□□□□ -0.41
PAX6-259ENST00000639916 PTPRGP23470 1445 aa12.46□□□□□ -0.41
PAX6-259ENST00000639916 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.42
PAX6-259ENST00000639916 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
PAX6-259ENST00000639916 DAPK1P53355 1430 aa12.44□□□□□ -0.42
PAX6-259ENST00000639916 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
PAX6-259ENST00000639916 ATP10BO94823 1461 aa12.44□□□□□ -0.42
PAX6-259ENST00000639916 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
PAX6-259ENST00000639916 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
PAX6-259ENST00000639916 ABCC5O15440 1437 aa12.43□□□□□ -0.42
PAX6-259ENST00000639916 KIF14Q15058 1648 aa12.43□□□□□ -0.42
PAX6-259ENST00000639916 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
PAX6-259ENST00000639916 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
PAX6-259ENST00000639916 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
PAX6-259ENST00000639916 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
PAX6-259ENST00000639916 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
PAX6-259ENST00000639916 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
PAX6-259ENST00000639916 ROCK1Q13464 1354 aa12.41□□□□□ -0.42
PAX6-259ENST00000639916 KDM6BO15054 1643 aa12.4□□□□□ -0.42
PAX6-259ENST00000639916 TONSLQ96HA7 1378 aa12.4□□□□□ -0.42
PAX6-259ENST00000639916 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.42
PAX6-259ENST00000639916 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.42
PAX6-259ENST00000639916 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
PAX6-259ENST00000639916 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
PAX6-259ENST00000639916 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
PAX6-259ENST00000639916 DENND4BO75064 1496 aaPredicted RBP12.35□□□□□ -0.43
PAX6-259ENST00000639916 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
PAX6-259ENST00000639916 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
PAX6-259ENST00000639916 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
PAX6-259ENST00000639916 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
PAX6-259ENST00000639916 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
PAX6-259ENST00000639916 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
PAX6-259ENST00000639916 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
PAX6-259ENST00000639916 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
PAX6-259ENST00000639916 HIRIP3Q9BW71 556 aaPredicted RBP12.3□□□□□ -0.44
PAX6-259ENST00000639916 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
PAX6-259ENST00000639916 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
PAX6-259ENST00000639916 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
PAX6-259ENST00000639916 ADGRL2O95490 1459 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
PAX6-259ENST00000639916 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.44
PAX6-259ENST00000639916 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.44
PAX6-259ENST00000639916 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
PAX6-259ENST00000639916 DDX10Q13206 875 aaKnown RBP12.26□□□□□ -0.45
PAX6-259ENST00000639916 GLIPR1L2Q4G1C9 344 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 KDM5BQ9UGL1 1544 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 ANKRD50Q9ULJ7 1429 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
PAX6-259ENST00000639916 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
PAX6-259ENST00000639916 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
PAX6-259ENST00000639916 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
PAX6-259ENST00000639916 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
PAX6-259ENST00000639916 PZPP20742 1482 aa12.24□□□□□ -0.45
PAX6-259ENST00000639916 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
PAX6-259ENST00000639916 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
PAX6-259ENST00000639916 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
PAX6-259ENST00000639916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
PAX6-259ENST00000639916 RSPH4AQ5TD94 716 aa12.23□□□□□ -0.45
PAX6-259ENST00000639916 TTC37Q6PGP7 1564 aa12.23□□□□□ -0.45
PAX6-259ENST00000639916 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms