RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
TRIO-225ENST00000639876 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
TRIO-225ENST00000639876 AKNAQ7Z591 1439 aa15.35■□□□□ 0.05
TRIO-225ENST00000639876 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.05
TRIO-225ENST00000639876 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
TRIO-225ENST00000639876 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
TRIO-225ENST00000639876 RICTORQ6R327 1708 aa15.33■□□□□ 0.04
TRIO-225ENST00000639876 MYO5CQ9NQX4 1742 aa15.33■□□□□ 0.04
TRIO-225ENST00000639876 PLCH2O75038 1416 aa15.33■□□□□ 0.04
TRIO-225ENST00000639876 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.04
TRIO-225ENST00000639876 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
TRIO-225ENST00000639876 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
TRIO-225ENST00000639876 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
TRIO-225ENST00000639876 RAPGEF3O95398 923 aa15.29■□□□□ 0.04
TRIO-225ENST00000639876 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
TRIO-225ENST00000639876 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
TRIO-225ENST00000639876 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
TRIO-225ENST00000639876 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
TRIO-225ENST00000639876 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.04
TRIO-225ENST00000639876 ATP1B4Q9UN42 357 aaPredicted RBP15.27■□□□□ 0.04
TRIO-225ENST00000639876 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.03
TRIO-225ENST00000639876 ARID4BQ4LE39 1312 aaPredicted RBP15.26■□□□□ 0.03
TRIO-225ENST00000639876 PTPRMP28827 1452 aa15.25■□□□□ 0.03
TRIO-225ENST00000639876 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
TRIO-225ENST00000639876 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
TRIO-225ENST00000639876 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
TRIO-225ENST00000639876 C9orf84Q5VXU9 1444 aa15.21■□□□□ 0.03
TRIO-225ENST00000639876 PREX2Q70Z35 1606 aa15.21■□□□□ 0.02
TRIO-225ENST00000639876 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
TRIO-225ENST00000639876 MADDQ8WXG6 1647 aa15.2■□□□□ 0.02
TRIO-225ENST00000639876 KDM5CP41229 1560 aa15.19■□□□□ 0.02
TRIO-225ENST00000639876 ATP10AO60312 1499 aa15.19■□□□□ 0.02
TRIO-225ENST00000639876 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
TRIO-225ENST00000639876 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
TRIO-225ENST00000639876 PLEKHH2Q8IVE3 1493 aa15.15■□□□□ 0.02
TRIO-225ENST00000639876 LRRIQ1Q96JM4 1722 aa15.15■□□□□ 0.02
TRIO-225ENST00000639876 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
TRIO-225ENST00000639876 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
TRIO-225ENST00000639876 ABCC1P33527 1531 aa15.14■□□□□ 0.01
TRIO-225ENST00000639876 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
TRIO-225ENST00000639876 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
TRIO-225ENST00000639876 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
TRIO-225ENST00000639876 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
TRIO-225ENST00000639876 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
TRIO-225ENST00000639876 AGLP35573 1532 aa15.1■□□□□ 0.01
TRIO-225ENST00000639876 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
TRIO-225ENST00000639876 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
TRIO-225ENST00000639876 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
TRIO-225ENST00000639876 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
TRIO-225ENST00000639876 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0.01
TRIO-225ENST00000639876 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
TRIO-225ENST00000639876 KIAA1107Q9UPP5 1409 aa15.08■□□□□ 0
TRIO-225ENST00000639876 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
TRIO-225ENST00000639876 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
TRIO-225ENST00000639876 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
TRIO-225ENST00000639876 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
TRIO-225ENST00000639876 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
TRIO-225ENST00000639876 ABCA6Q8N139 1617 aa15.03■□□□□ -0
TRIO-225ENST00000639876 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
TRIO-225ENST00000639876 AFAP1Q8N556 730 aa15.03■□□□□ -0
TRIO-225ENST00000639876 CEP162Q5TB80 1403 aa15.02■□□□□ -0
TRIO-225ENST00000639876 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
TRIO-225ENST00000639876 SIGLEC1Q9BZZ2 1709 aa15.01□□□□□ -0.01
TRIO-225ENST00000639876 SETD1BQ9UPS6 1966 aaKnown RBP15.01□□□□□ -0.01
TRIO-225ENST00000639876 SAMD9LQ8IVG5 1584 aa15.01□□□□□ -0.01
TRIO-225ENST00000639876 SYCP2Q9BX26 1530 aa15.01□□□□□ -0.01
TRIO-225ENST00000639876 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
TRIO-225ENST00000639876 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
TRIO-225ENST00000639876 MLECQ14165 292 aa15□□□□□ -0.01
TRIO-225ENST00000639876 KIDINS220Q9ULH0 1771 aa15□□□□□ -0.01
TRIO-225ENST00000639876 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
TRIO-225ENST00000639876 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
TRIO-225ENST00000639876 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
TRIO-225ENST00000639876 MROH2AA6NES4 1674 aa14.99□□□□□ -0.01
TRIO-225ENST00000639876 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
TRIO-225ENST00000639876 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
TRIO-225ENST00000639876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.017e-8■■□□□ 14
TRIO-225ENST00000639876 INO80Q9ULG1 1556 aaPredicted RBP14.97□□□□□ -0.01
TRIO-225ENST00000639876 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
TRIO-225ENST00000639876 RTEL1-TNFRSF6BF6WH68 1400 aa14.96□□□□□ -0.01
TRIO-225ENST00000639876 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
TRIO-225ENST00000639876 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
TRIO-225ENST00000639876 ADGBQ8N7X0 1667 aa14.96□□□□□ -0.01
TRIO-225ENST00000639876 TIAM1Q13009 1591 aa14.95□□□□□ -0.02
TRIO-225ENST00000639876 NPATQ14207 1427 aa14.95□□□□□ -0.02
TRIO-225ENST00000639876 FBXO41Q8TF61 875 aa14.95□□□□□ -0.02
TRIO-225ENST00000639876 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
TRIO-225ENST00000639876 MAP3K1Q13233 1512 aa14.93□□□□□ -0.02
TRIO-225ENST00000639876 A2MP01023 1474 aa14.93□□□□□ -0.02
TRIO-225ENST00000639876 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
TRIO-225ENST00000639876 C3P01024 1663 aa14.92□□□□□ -0.02
TRIO-225ENST00000639876 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
TRIO-225ENST00000639876 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
TRIO-225ENST00000639876 HNRNPMP52272 730 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRIO-225ENST00000639876 ARHGEF5Q12774 1597 aa14.87□□□□□ -0.03
TRIO-225ENST00000639876 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
TRIO-225ENST00000639876 PTPRTO14522 1441 aa14.86□□□□□ -0.03
TRIO-225ENST00000639876 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
TRIO-225ENST00000639876 HSPA2P54652 639 aa14.85□□□□□ -0.03
TRIO-225ENST00000639876 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms