RNA–Protein interactions for RNA: ENST00000639716.1

KCNMA1-269, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-269ENST00000639716 PTMSP20962 102 aa9.39□□□□□ -0.91
KCNMA1-269ENST00000639716 CANXP27824 592 aaKnown RBP9.38□□□□□ -0.91
KCNMA1-269ENST00000639716 TARBP1Q13395 1621 aaKnown RBP9.38□□□□□ -0.91
KCNMA1-269ENST00000639716 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
KCNMA1-269ENST00000639716 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
KCNMA1-269ENST00000639716 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
KCNMA1-269ENST00000639716 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
KCNMA1-269ENST00000639716 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
KCNMA1-269ENST00000639716 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
KCNMA1-269ENST00000639716 MIER1Q8N108 512 aa9.36□□□□□ -0.91
KCNMA1-269ENST00000639716 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
KCNMA1-269ENST00000639716 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
KCNMA1-269ENST00000639716 HECW1Q76N89 1606 aa9.35□□□□□ -0.91
KCNMA1-269ENST00000639716 CHMP4BQ9H444 224 aaKnown RBP9.35□□□□□ -0.91
KCNMA1-269ENST00000639716 CARMIL1Q5VZK9 1371 aa9.35□□□□□ -0.91
KCNMA1-269ENST00000639716 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
KCNMA1-269ENST00000639716 BCCIPQ9P287 314 aaKnown RBP eCLIP9.34□□□□□ -0.91
KCNMA1-269ENST00000639716 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
KCNMA1-269ENST00000639716 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
KCNMA1-269ENST00000639716 FOXD1Q16676 465 aa9.34□□□□□ -0.92
KCNMA1-269ENST00000639716 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.92
KCNMA1-269ENST00000639716 ARID3AQ99856 593 aa9.33□□□□□ -0.92
KCNMA1-269ENST00000639716 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
KCNMA1-269ENST00000639716 KIF27Q86VH2 1401 aa9.33□□□□□ -0.92
KCNMA1-269ENST00000639716 MTUS2Q5JR59 1369 aa9.32□□□□□ -0.92
KCNMA1-269ENST00000639716 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
KCNMA1-269ENST00000639716 PBRM1Q86U86 1689 aa9.32□□□□□ -0.92
KCNMA1-269ENST00000639716 TCOF1Q13428 1488 aaKnown RBP9.32□□□□□ -0.92
KCNMA1-269ENST00000639716 SIN3AQ96ST3 1273 aa9.32□□□□□ -0.92
KCNMA1-269ENST00000639716 HSP90AA2PQ14568 343 aaPredicted RBP9.31□□□□□ -0.92
KCNMA1-269ENST00000639716 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
KCNMA1-269ENST00000639716 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
KCNMA1-269ENST00000639716 IGF1RP08069 1367 aa9.31□□□□□ -0.92
KCNMA1-269ENST00000639716 DENND4BO75064 1496 aaPredicted RBP9.3□□□□□ -0.92
KCNMA1-269ENST00000639716 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
KCNMA1-269ENST00000639716 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
KCNMA1-269ENST00000639716 TMEM132AQ24JP5 1023 aa9.29□□□□□ -0.92
KCNMA1-269ENST00000639716 APPP05067 770 aa9.29□□□□□ -0.92
KCNMA1-269ENST00000639716 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
KCNMA1-269ENST00000639716 ADCY10Q96PN6 1610 aa9.29□□□□□ -0.92
KCNMA1-269ENST00000639716 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 AKNAQ7Z591 1439 aa9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 CROCC2H7BZ55 1655 aa9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 MLECQ14165 292 aa9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
KCNMA1-269ENST00000639716 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.92
KCNMA1-269ENST00000639716 USP35Q9P2H5 1018 aa9.27□□□□□ -0.92
KCNMA1-269ENST00000639716 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
KCNMA1-269ENST00000639716 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
KCNMA1-269ENST00000639716 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
KCNMA1-269ENST00000639716 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
KCNMA1-269ENST00000639716 FHOD3Q2V2M9 1422 aa9.26□□□□□ -0.93
KCNMA1-269ENST00000639716 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
KCNMA1-269ENST00000639716 CNPY4Q8N129 248 aa9.26□□□□□ -0.93
KCNMA1-269ENST00000639716 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
KCNMA1-269ENST00000639716 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
KCNMA1-269ENST00000639716 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
KCNMA1-269ENST00000639716 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
KCNMA1-269ENST00000639716 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 ZFP91Q96JP5 570 aaPredicted RBP9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 POLA1P09884 1462 aaPredicted RBP9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 MAGI3Q5TCQ9 1506 aa9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 PSMD1Q99460 953 aa9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 CFDP1Q9UEE9 299 aaPredicted RBP9.22□□□□□ -0.93
KCNMA1-269ENST00000639716 TNNT2P45379 298 aaPredicted RBP9.21□□□□□ -0.93
KCNMA1-269ENST00000639716 ADAMTS12P58397 1594 aa9.21□□□□□ -0.94
KCNMA1-269ENST00000639716 PTMAP06454 111 aaKnown RBP9.21□□□□□ -0.94
KCNMA1-269ENST00000639716 SUPT6HQ7KZ85 1726 aaKnown RBP9.21□□□□□ -0.94
KCNMA1-269ENST00000639716 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
KCNMA1-269ENST00000639716 URB2Q14146 1524 aaKnown RBP9.2□□□□□ -0.94
KCNMA1-269ENST00000639716 RBM19Q9Y4C8 960 aaKnown RBP9.19□□□□□ -0.94
KCNMA1-269ENST00000639716 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
KCNMA1-269ENST00000639716 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.19□□□□□ -0.94
KCNMA1-269ENST00000639716 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
KCNMA1-269ENST00000639716 PLCD4Q9BRC7 762 aa9.19□□□□□ -0.94
KCNMA1-269ENST00000639716 NCOA2Q15596 1464 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 E9PCH4 1651 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 TSPY4P0CV99 314 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 TSPY10P0CW01 314 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 FKBP8Q14318 412 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
KCNMA1-269ENST00000639716 ZNF644Q9H582 1327 aaPredicted RBP9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 OS9Q13438 667 aaPredicted RBP9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 NUTM2DQ5VT03 806 aaPredicted RBP9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 WDR62O43379 1518 aa9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 FHAD1B1AJZ9 1412 aa9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 HFM1A2PYH4 1435 aa9.17□□□□□ -0.94
KCNMA1-269ENST00000639716 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
KCNMA1-269ENST00000639716 PHLDB1Q86UU1 1377 aa9.16□□□□□ -0.94
KCNMA1-269ENST00000639716 IPO4Q8TEX9 1081 aaKnown RBP9.16□□□□□ -0.94
KCNMA1-269ENST00000639716 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
KCNMA1-269ENST00000639716 DNMT1P26358 1616 aaKnown RBP9.15□□□□□ -0.95
KCNMA1-269ENST00000639716 MBD5Q9P267 1494 aa9.14□□□□□ -0.95
KCNMA1-269ENST00000639716 NEFMP07197 916 aa9.14□□□□□ -0.95
KCNMA1-269ENST00000639716 CLSTN1O94985 981 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms