RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
RBM39-245ENST00000639702 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
RBM39-245ENST00000639702 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
RBM39-245ENST00000639702 NRDCO43847 1150 aa15.63■□□□□ 0.09
RBM39-245ENST00000639702 GGT6Q6P531 493 aa15.62■□□□□ 0.09
RBM39-245ENST00000639702 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
RBM39-245ENST00000639702 PKD2Q13563 968 aa15.62■□□□□ 0.09
RBM39-245ENST00000639702 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
RBM39-245ENST00000639702 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
RBM39-245ENST00000639702 HSCBQ8IWL3 235 aa15.61■□□□□ 0.09
RBM39-245ENST00000639702 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
RBM39-245ENST00000639702 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
RBM39-245ENST00000639702 ROCK2O75116 1388 aaKnown RBP15.59■□□□□ 0.09
RBM39-245ENST00000639702 HSPA5P11021 654 aaKnown RBP15.58■□□□□ 0.08
RBM39-245ENST00000639702 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
RBM39-245ENST00000639702 GOLGA6L4A6NEF3 574 aa15.58■□□□□ 0.08
RBM39-245ENST00000639702 RALBP1Q15311 655 aa15.58■□□□□ 0.08
RBM39-245ENST00000639702 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
RBM39-245ENST00000639702 TPRNQ4KMQ1 711 aa15.57■□□□□ 0.08
RBM39-245ENST00000639702 TULP1O00294 542 aaPredicted RBP15.56■□□□□ 0.08
RBM39-245ENST00000639702 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
RBM39-245ENST00000639702 STK26Q9P289 416 aa15.56■□□□□ 0.08
RBM39-245ENST00000639702 SOX12O15370 315 aa15.55■□□□□ 0.08
RBM39-245ENST00000639702 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
RBM39-245ENST00000639702 NUP155O75694 1391 aa15.55■□□□□ 0.08
RBM39-245ENST00000639702 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
RBM39-245ENST00000639702 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
RBM39-245ENST00000639702 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.08
RBM39-245ENST00000639702 HDAC5Q9UQL6 1122 aa15.52■□□□□ 0.07
RBM39-245ENST00000639702 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
RBM39-245ENST00000639702 CSB-PGBD3P0DP91 1061 aa15.52■□□□□ 0.07
RBM39-245ENST00000639702 PTMSP20962 102 aa15.52■□□□□ 0.07
RBM39-245ENST00000639702 PLCB2Q00722 1185 aa15.52■□□□□ 0.07
RBM39-245ENST00000639702 EID1Q9Y6B2 187 aa15.51■□□□□ 0.07
RBM39-245ENST00000639702 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
RBM39-245ENST00000639702 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
RBM39-245ENST00000639702 SPAG9O60271 1321 aaKnown RBP15.5■□□□□ 0.07
RBM39-245ENST00000639702 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
RBM39-245ENST00000639702 TAOK2Q9UL54 1235 aa15.5■□□□□ 0.07
RBM39-245ENST00000639702 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
RBM39-245ENST00000639702 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
RBM39-245ENST00000639702 RWDD1Q9H446 243 aaPredicted RBP15.49■□□□□ 0.07
RBM39-245ENST00000639702 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
RBM39-245ENST00000639702 TMX4Q9H1E5 349 aaPredicted RBP15.48■□□□□ 0.07
RBM39-245ENST00000639702 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
RBM39-245ENST00000639702 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.078e-22■□□□□ 9.7
RBM39-245ENST00000639702 L1TD1Q5T7N2 865 aaKnown RBP15.47■□□□□ 0.07
RBM39-245ENST00000639702 GNL2Q13823 731 aaKnown RBP15.47■□□□□ 0.07
RBM39-245ENST00000639702 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
RBM39-245ENST00000639702 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
RBM39-245ENST00000639702 STK31Q9BXU1 1019 aa15.46■□□□□ 0.06
RBM39-245ENST00000639702 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
RBM39-245ENST00000639702 KIF3BO15066 747 aa15.45■□□□□ 0.06
RBM39-245ENST00000639702 LMOD3Q0VAK6 560 aa15.45■□□□□ 0.06
RBM39-245ENST00000639702 GPATCH3Q96I76 525 aa15.45■□□□□ 0.06
RBM39-245ENST00000639702 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
RBM39-245ENST00000639702 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
RBM39-245ENST00000639702 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
RBM39-245ENST00000639702 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
RBM39-245ENST00000639702 ITPRIPQ8IWB1 547 aa15.43■□□□□ 0.06
RBM39-245ENST00000639702 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
RBM39-245ENST00000639702 RCAN3Q9UKA8 241 aa15.42■□□□□ 0.06
RBM39-245ENST00000639702 ISY1Q9ULR0 285 aaKnown RBP15.42■□□□□ 0.06
RBM39-245ENST00000639702 WASHC2CQ9Y4E1 1318 aa15.42■□□□□ 0.06
RBM39-245ENST00000639702 FOXD1Q16676 465 aa15.42■□□□□ 0.06
RBM39-245ENST00000639702 HMMRO75330 724 aa15.41■□□□□ 0.06
RBM39-245ENST00000639702 NAP1L5Q96NT1 182 aaPredicted RBP15.41■□□□□ 0.06
RBM39-245ENST00000639702 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
RBM39-245ENST00000639702 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
RBM39-245ENST00000639702 HNRNPMP52272 730 aaKnown RBP eCLIP15.39■□□□□ 0.05
RBM39-245ENST00000639702 CLSTN1O94985 981 aa15.38■□□□□ 0.05
RBM39-245ENST00000639702 DRC7Q8IY82 874 aa15.38■□□□□ 0.05
RBM39-245ENST00000639702 NGDNQ8NEJ9 315 aaKnown RBP15.38■□□□□ 0.05
RBM39-245ENST00000639702 MSNP26038 577 aaKnown RBP15.38■□□□□ 0.05
RBM39-245ENST00000639702 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
RBM39-245ENST00000639702 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
RBM39-245ENST00000639702 TCERG1O14776 1098 aaKnown RBP15.36■□□□□ 0.05
RBM39-245ENST00000639702 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
RBM39-245ENST00000639702 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
RBM39-245ENST00000639702 ZNF330Q9Y3S2 320 aaPredicted RBP15.36■□□□□ 0.05
RBM39-245ENST00000639702 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
RBM39-245ENST00000639702 APBB1O00213 710 aa15.35■□□□□ 0.05
RBM39-245ENST00000639702 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
RBM39-245ENST00000639702 SMC4Q9NTJ3 1288 aa15.35■□□□□ 0.05
RBM39-245ENST00000639702 CCDC34Q96HJ3 373 aa15.35■□□□□ 0.05
RBM39-245ENST00000639702 AMPHP49418 695 aa15.35■□□□□ 0.05
RBM39-245ENST00000639702 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
RBM39-245ENST00000639702 WIZO95785 1651 aa15.34■□□□□ 0.05
RBM39-245ENST00000639702 NLRP13Q86W25 1043 aa15.33■□□□□ 0.05
RBM39-245ENST00000639702 JPH4Q96JJ6 628 aa15.33■□□□□ 0.05
RBM39-245ENST00000639702 TPM4P67936 248 aa15.33■□□□□ 0.04
RBM39-245ENST00000639702 KIF15Q9NS87 1388 aa15.33■□□□□ 0.04
RBM39-245ENST00000639702 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
RBM39-245ENST00000639702 CCDC144AA2RUR9 1427 aa15.32■□□□□ 0.04
RBM39-245ENST00000639702 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
RBM39-245ENST00000639702 CENPJQ9HC77 1338 aaPredicted RBP15.3■□□□□ 0.04
RBM39-245ENST00000639702 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
RBM39-245ENST00000639702 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
RBM39-245ENST00000639702 G3V3G9 751 aa15.29■□□□□ 0.04
RBM39-245ENST00000639702 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms