RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ADGRD1Q6QNK2 874 aa6.06□□□□□ -1.44
LMBR1-222ENST00000638959 POTEEQ6S8J3 1075 aa6.05□□□□□ -1.44
LMBR1-222ENST00000638959 KLHL34Q8N239 644 aa6.04□□□□□ -1.44
LMBR1-222ENST00000638959 KCTD12Q96CX2 325 aaKnown RBP6.04□□□□□ -1.44
LMBR1-222ENST00000638959 NUDT7P0C024 238 aa6.03□□□□□ -1.44
LMBR1-222ENST00000638959 Q6ZNB5 142 aa6.03□□□□□ -1.44
LMBR1-222ENST00000638959 EFCAB3Q8N7B9 438 aa6.03□□□□□ -1.44
LMBR1-222ENST00000638959 LHX6Q9UPM6 363 aa6□□□□□ -1.45
LMBR1-222ENST00000638959 STAC3Q96MF2 364 aa5.99□□□□□ -1.45
LMBR1-222ENST00000638959 A0A0G2JS52 829 aa5.98□□□□□ -1.45
LMBR1-222ENST00000638959 ARHGAP33O14559 1287 aa5.98□□□□□ -1.45
LMBR1-222ENST00000638959 PTPN5P54829 565 aa5.98□□□□□ -1.45
LMBR1-222ENST00000638959 TK2O00142 265 aa5.96□□□□□ -1.46
LMBR1-222ENST00000638959 HRO43593 1189 aa5.96□□□□□ -1.46
LMBR1-222ENST00000638959 IFFO2Q5TF58 517 aa5.96□□□□□ -1.46
LMBR1-222ENST00000638959 DMRTA1Q5VZB9 504 aa5.94□□□□□ -1.46
LMBR1-222ENST00000638959 FBXO3Q9UK99 471 aa5.93□□□□□ -1.46
LMBR1-222ENST00000638959 CIZ1Q9ULV3 898 aaPredicted RBP5.93□□□□□ -1.46
LMBR1-222ENST00000638959 PSEN2P49810 448 aa5.92□□□□□ -1.46
LMBR1-222ENST00000638959 MS4A4AQ96JQ5 239 aa5.92□□□□□ -1.46
LMBR1-222ENST00000638959 PCDHGA4Q9Y5G9 962 aa5.92□□□□□ -1.46
LMBR1-222ENST00000638959 PSDA5PKW4 1024 aaPredicted RBP5.91□□□□□ -1.46
LMBR1-222ENST00000638959 SOX12O15370 315 aa5.91□□□□□ -1.46
LMBR1-222ENST00000638959 FKBP8Q14318 412 aa5.9□□□□□ -1.46
LMBR1-222ENST00000638959 PHF8Q9UPP1 1060 aa5.9□□□□□ -1.46
LMBR1-222ENST00000638959 VASPP50552 380 aaPredicted RBP5.88□□□□□ -1.47
LMBR1-222ENST00000638959 C2orf72A6NCS6 295 aa5.86□□□□□ -1.47
LMBR1-222ENST00000638959 SLC34A2O95436 690 aa5.85□□□□□ -1.47
LMBR1-222ENST00000638959 THSD4Q6ZMP0 1018 aa5.85□□□□□ -1.47
LMBR1-222ENST00000638959 KCNH8Q96L42 1107 aa5.85□□□□□ -1.47
LMBR1-222ENST00000638959 KIF3CO14782 793 aa5.84□□□□□ -1.47
LMBR1-222ENST00000638959 TRAF7Q6Q0C0 670 aa5.84□□□□□ -1.47
LMBR1-222ENST00000638959 LAPTM4AQ15012 233 aa5.83□□□□□ -1.48
LMBR1-222ENST00000638959 PPP4R3BQ5MIZ7 849 aa5.83□□□□□ -1.48
LMBR1-222ENST00000638959 KCNK17Q96T54 332 aa5.83□□□□□ -1.48
LMBR1-222ENST00000638959 GOLGA8CPA6NN73 597 aa5.82□□□□□ -1.48
LMBR1-222ENST00000638959 LCE2BO14633 110 aa5.82□□□□□ -1.48
LMBR1-222ENST00000638959 SPOCK2Q92563 424 aa5.81□□□□□ -1.48
LMBR1-222ENST00000638959 WNT2BQ93097 391 aa5.8□□□□□ -1.48
LMBR1-222ENST00000638959 VPS9D1Q9Y2B5 631 aa5.8□□□□□ -1.48
LMBR1-222ENST00000638959 NLRP6P59044 892 aa5.79□□□□□ -1.48
LMBR1-222ENST00000638959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.78□□□□□ -1.48
LMBR1-222ENST00000638959 TMC2Q8TDI7 906 aa5.78□□□□□ -1.48
LMBR1-222ENST00000638959 ZFP91Q96JP5 570 aaPredicted RBP5.78□□□□□ -1.48
LMBR1-222ENST00000638959 GFRA3O60609 400 aa5.77□□□□□ -1.49
LMBR1-222ENST00000638959 ZNF787Q6DD87 383 aa5.76□□□□□ -1.49
LMBR1-222ENST00000638959 MRPL50Q8N5N7 158 aaKnown RBP5.76□□□□□ -1.49
LMBR1-222ENST00000638959 TRIM41Q8WV44 630 aa5.76□□□□□ -1.49
LMBR1-222ENST00000638959 ITGBL1O95965 494 aaPredicted RBP5.75□□□□□ -1.49
LMBR1-222ENST00000638959 KDM4FA0A1W2PPD8 638 aa5.74□□□□□ -1.49
LMBR1-222ENST00000638959 RIOK3O14730 519 aaKnown RBP5.74□□□□□ -1.49
LMBR1-222ENST00000638959 FBXO22Q8NEZ5 403 aa5.74□□□□□ -1.49
LMBR1-222ENST00000638959 ZNF775Q96BV0 537 aaPredicted RBP5.74□□□□□ -1.49
LMBR1-222ENST00000638959 BHMG1C9JSJ3 638 aaPredicted RBP5.72□□□□□ -1.49
LMBR1-222ENST00000638959 VGFO15240 615 aaPredicted RBP5.72□□□□□ -1.49
LMBR1-222ENST00000638959 PTCD2Q8WV60 388 aaKnown RBP5.71□□□□□ -1.5
LMBR1-222ENST00000638959 SLC4A5Q9BY07 1137 aa5.71□□□□□ -1.5
LMBR1-222ENST00000638959 NRG2O14511 850 aaPredicted RBP5.7□□□□□ -1.5
LMBR1-222ENST00000638959 IFNLR1Q8IU57 520 aaPredicted RBP5.7□□□□□ -1.5
LMBR1-222ENST00000638959 NBPF3Q9H094 633 aa5.7□□□□□ -1.5
LMBR1-222ENST00000638959 RNF25Q96BH1 459 aaPredicted RBP5.69□□□□□ -1.5
LMBR1-222ENST00000638959 KCNC4Q03721 635 aa5.68□□□□□ -1.5
LMBR1-222ENST00000638959 MFRPQ9BY79 579 aa5.68□□□□□ -1.5
LMBR1-222ENST00000638959 TBC1D12O60347 775 aa5.67□□□□□ -1.5
LMBR1-222ENST00000638959 ZNF454Q8N9F8 522 aa5.67□□□□□ -1.5
LMBR1-222ENST00000638959 ANKK1Q8NFD2 765 aa5.67□□□□□ -1.5
LMBR1-222ENST00000638959 PTPREP23469 700 aa5.66□□□□□ -1.5
LMBR1-222ENST00000638959 ZBED2Q9BTP6 218 aa5.66□□□□□ -1.5
LMBR1-222ENST00000638959 BCL11BQ9C0K0 894 aaPredicted RBP5.66□□□□□ -1.5
LMBR1-222ENST00000638959 BCL2L12Q9HB09 334 aa5.66□□□□□ -1.5
LMBR1-222ENST00000638959 BCAMP50895 628 aa5.64□□□□□ -1.51
LMBR1-222ENST00000638959 STK24Q9Y6E0 443 aa5.64□□□□□ -1.51
LMBR1-222ENST00000638959 NYAP1Q6ZVC0 841 aa5.63□□□□□ -1.51
LMBR1-222ENST00000638959 PLPP6Q8IY26 295 aa5.63□□□□□ -1.51
LMBR1-222ENST00000638959 PRKD2Q9BZL6 878 aa5.63□□□□□ -1.51
LMBR1-222ENST00000638959 FOXK1P85037 733 aa5.6□□□□□ -1.51
LMBR1-222ENST00000638959 SOWAHBA6NEL2 793 aa5.59□□□□□ -1.51
LMBR1-222ENST00000638959 WBP1LQ9NX94 342 aa5.59□□□□□ -1.51
LMBR1-222ENST00000638959 TAOK2Q9UL54 1235 aa5.58□□□□□ -1.52
LMBR1-222ENST00000638959 PDZRN3Q9UPQ7 1066 aa5.58□□□□□ -1.52
LMBR1-222ENST00000638959 FOSBP53539 338 aa5.57□□□□□ -1.52
LMBR1-222ENST00000638959 STK25O00506 426 aa5.56□□□□□ -1.52
LMBR1-222ENST00000638959 UPF1Q92900 1129 aaKnown RBP eCLIP5.56□□□□□ -1.52
LMBR1-222ENST00000638959 RABGEF1Q9UJ41 708 aa5.56□□□□□ -1.52
LMBR1-222ENST00000638959 V9GY48 417 aaPredicted RBP5.56□□□□□ -1.52
LMBR1-222ENST00000638959 DSG2Q14126 1118 aa5.55□□□□□ -1.52
LMBR1-222ENST00000638959 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
LMBR1-222ENST00000638959 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
LMBR1-222ENST00000638959 ADAM33Q9BZ11 813 aa5.54□□□□□ -1.52
LMBR1-222ENST00000638959 PPP1R37O75864 691 aa5.53□□□□□ -1.52
LMBR1-222ENST00000638959 PROX2Q3B8N5 592 aa5.53□□□□□ -1.52
LMBR1-222ENST00000638959 ZDHHC16Q969W1 377 aa5.53□□□□□ -1.52
LMBR1-222ENST00000638959 JPH4Q96JJ6 628 aa5.53□□□□□ -1.52
LMBR1-222ENST00000638959 ZFRQ96KR1 1074 aaKnown RBP5.53□□□□□ -1.52
LMBR1-222ENST00000638959 GPHNQ9NQX3 736 aaPredicted RBP5.53□□□□□ -1.52
LMBR1-222ENST00000638959 PPP1R3GB7ZBB8 358 aa5.52□□□□□ -1.53
LMBR1-222ENST00000638959 TREML4Q6UXN2 200 aa5.52□□□□□ -1.53
LMBR1-222ENST00000638959 LAPTM4BQ86VI4 370 aa5.52□□□□□ -1.53
LMBR1-222ENST00000638959 OXER1Q8TDS5 423 aa5.52□□□□□ -1.53
LMBR1-222ENST00000638959 HPS5Q9UPZ3 1129 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms