RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
PDE4D-229ENST00000638939 DENND4BO75064 1496 aaPredicted RBP9.29□□□□□ -0.92
PDE4D-229ENST00000638939 ZBTB22O15209 634 aa9.29□□□□□ -0.92
PDE4D-229ENST00000638939 ILDR1Q86SU0 546 aaPredicted RBP9.29□□□□□ -0.92
PDE4D-229ENST00000638939 KIF14Q15058 1648 aa9.29□□□□□ -0.92
PDE4D-229ENST00000638939 CDK13Q14004 1512 aaKnown RBP9.29□□□□□ -0.92
PDE4D-229ENST00000638939 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
PDE4D-229ENST00000638939 P3H3Q8IVL6 736 aa9.28□□□□□ -0.92
PDE4D-229ENST00000638939 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-229ENST00000638939 PREX1Q8TCU6 1659 aa9.28□□□□□ -0.92
PDE4D-229ENST00000638939 MAGI2Q86UL8 1455 aa9.28□□□□□ -0.92
PDE4D-229ENST00000638939 ARID3CA6NKF2 412 aa9.27□□□□□ -0.93
PDE4D-229ENST00000638939 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
PDE4D-229ENST00000638939 PREX2Q70Z35 1606 aa9.26□□□□□ -0.93
PDE4D-229ENST00000638939 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
PDE4D-229ENST00000638939 KDM5CP41229 1560 aa9.25□□□□□ -0.93
PDE4D-229ENST00000638939 POGZQ7Z3K3 1410 aa9.25□□□□□ -0.93
PDE4D-229ENST00000638939 RAPGEF3O95398 923 aa9.25□□□□□ -0.93
PDE4D-229ENST00000638939 FMN1Q68DA7 1419 aa9.24□□□□□ -0.93
PDE4D-229ENST00000638939 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
PDE4D-229ENST00000638939 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
PDE4D-229ENST00000638939 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
PDE4D-229ENST00000638939 CDC42BPAQ5VT25 1732 aa9.22□□□□□ -0.93
PDE4D-229ENST00000638939 ARHGAP35Q9NRY4 1499 aa9.22□□□□□ -0.93
PDE4D-229ENST00000638939 PLCH2O75038 1416 aa9.22□□□□□ -0.93
PDE4D-229ENST00000638939 YEATS2Q9ULM3 1422 aa9.22□□□□□ -0.93
PDE4D-229ENST00000638939 ABCA6Q8N139 1617 aa9.21□□□□□ -0.93
PDE4D-229ENST00000638939 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.94
PDE4D-229ENST00000638939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-229ENST00000638939 HNRNPUL2Q1KMD3 747 aaKnown RBP9.21□□□□□ -0.94
PDE4D-229ENST00000638939 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-229ENST00000638939 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.94
PDE4D-229ENST00000638939 SETD1BQ9UPS6 1966 aaKnown RBP9.21□□□□□ -0.94
PDE4D-229ENST00000638939 DIP2CQ9Y2E4 1556 aa9.2□□□□□ -0.94
PDE4D-229ENST00000638939 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
PDE4D-229ENST00000638939 ABCC1P33527 1531 aa9.2□□□□□ -0.94
PDE4D-229ENST00000638939 C3P01024 1663 aa9.2□□□□□ -0.94
PDE4D-229ENST00000638939 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
PDE4D-229ENST00000638939 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
PDE4D-229ENST00000638939 MROH2AA6NES4 1674 aa9.18□□□□□ -0.94
PDE4D-229ENST00000638939 ATP10AO60312 1499 aa9.18□□□□□ -0.94
PDE4D-229ENST00000638939 CLIP1P30622 1438 aa9.18□□□□□ -0.94
PDE4D-229ENST00000638939 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-229ENST00000638939 STRCQ7RTU9 1775 aa9.18□□□□□ -0.94
PDE4D-229ENST00000638939 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
PDE4D-229ENST00000638939 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
PDE4D-229ENST00000638939 ARID4BQ4LE39 1312 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-229ENST00000638939 FBXO41Q8TF61 875 aa9.16□□□□□ -0.94
PDE4D-229ENST00000638939 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-229ENST00000638939 AGLP35573 1532 aa9.15□□□□□ -0.95
PDE4D-229ENST00000638939 FYCO1Q9BQS8 1478 aa9.15□□□□□ -0.95
PDE4D-229ENST00000638939 MLH3Q9UHC1 1453 aa9.14□□□□□ -0.95
PDE4D-229ENST00000638939 SLC24A1O60721 1099 aa9.13□□□□□ -0.95
PDE4D-229ENST00000638939 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
PDE4D-229ENST00000638939 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
PDE4D-229ENST00000638939 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
PDE4D-229ENST00000638939 INO80Q9ULG1 1556 aaPredicted RBP9.12□□□□□ -0.95
PDE4D-229ENST00000638939 SUPT6HQ7KZ85 1726 aaKnown RBP9.12□□□□□ -0.95
PDE4D-229ENST00000638939 CDK11AQ9UQ88 783 aaPredicted RBP9.12□□□□□ -0.95
PDE4D-229ENST00000638939 ADGBQ8N7X0 1667 aa9.11□□□□□ -0.95
PDE4D-229ENST00000638939 EFCAB2Q5VUJ9 269 aa9.11□□□□□ -0.95
PDE4D-229ENST00000638939 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
PDE4D-229ENST00000638939 ATXN8OSP0DMR3 200 aa9.1□□□□□ -0.95
PDE4D-229ENST00000638939 UHRF1BP1Q6BDS2 1440 aa9.09□□□□□ -0.95
PDE4D-229ENST00000638939 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
PDE4D-229ENST00000638939 SYCP2Q9BX26 1530 aa9.09□□□□□ -0.95
PDE4D-229ENST00000638939 MYO3AQ8NEV4 1616 aa9.09□□□□□ -0.95
PDE4D-229ENST00000638939 CLTCQ00610 1675 aaKnown RBP9.08□□□□□ -0.96
PDE4D-229ENST00000638939 DMRT2Q9Y5R5 561 aa9.08□□□□□ -0.96
PDE4D-229ENST00000638939 CNTLNQ9NXG0 1405 aa9.07□□□□□ -0.96
PDE4D-229ENST00000638939 ATP7AQ04656 1500 aa9.07□□□□□ -0.96
PDE4D-229ENST00000638939 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
PDE4D-229ENST00000638939 HSPA2P54652 639 aa9.06□□□□□ -0.96
PDE4D-229ENST00000638939 TIAM1Q13009 1591 aa9.05□□□□□ -0.96
PDE4D-229ENST00000638939 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
PDE4D-229ENST00000638939 MLECQ14165 292 aa9.05□□□□□ -0.96
PDE4D-229ENST00000638939 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
PDE4D-229ENST00000638939 NPATQ14207 1427 aa9.05□□□□□ -0.96
PDE4D-229ENST00000638939 IQSEC2Q5JU85 1478 aa9.04□□□□□ -0.96
PDE4D-229ENST00000638939 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
PDE4D-229ENST00000638939 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
PDE4D-229ENST00000638939 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
PDE4D-229ENST00000638939 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
PDE4D-229ENST00000638939 PTPRTO14522 1441 aa9.04□□□□□ -0.96
PDE4D-229ENST00000638939 MYCNP04198 464 aaPredicted RBP9.03□□□□□ -0.96
PDE4D-229ENST00000638939 AFAP1Q8N556 730 aa9.03□□□□□ -0.96
PDE4D-229ENST00000638939 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
PDE4D-229ENST00000638939 FAM135AQ9P2D6 1515 aa9.02□□□□□ -0.97
PDE4D-229ENST00000638939 NCOA1Q15788 1441 aa9.02□□□□□ -0.97
PDE4D-229ENST00000638939 KIAA1107Q9UPP5 1409 aa9.02□□□□□ -0.97
PDE4D-229ENST00000638939 CEP170BQ9Y4F5 1589 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-229ENST00000638939 CAMSAP1Q5T5Y3 1602 aa9.02□□□□□ -0.97
PDE4D-229ENST00000638939 CERKQ8TCT0 537 aa9.01□□□□□ -0.97
PDE4D-229ENST00000638939 SPATA31D1Q6ZQQ2 1576 aa8.99□□□□□ -0.97
PDE4D-229ENST00000638939 CEBPAP49715 358 aaPredicted RBP8.99□□□□□ -0.97
PDE4D-229ENST00000638939 A2MP01023 1474 aa8.99□□□□□ -0.97
PDE4D-229ENST00000638939 PLA2R1Q13018 1463 aa8.99□□□□□ -0.97
PDE4D-229ENST00000638939 ZC3H13Q5T200 1668 aaKnown RBP8.98□□□□□ -0.97
PDE4D-229ENST00000638939 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
PDE4D-229ENST00000638939 TCOF1Q13428 1488 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms