RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
GFAP-227ENST00000638400 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
GFAP-227ENST00000638400 RICTORQ6R327 1708 aa20.05■□□□□ 0.8
GFAP-227ENST00000638400 ARHGEF40Q8TER5 1519 aa20.04■□□□□ 0.8
GFAP-227ENST00000638400 MAGI2Q86UL8 1455 aa20.01■□□□□ 0.79
GFAP-227ENST00000638400 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
GFAP-227ENST00000638400 PREX2Q70Z35 1606 aa20■□□□□ 0.79
GFAP-227ENST00000638400 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
GFAP-227ENST00000638400 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
GFAP-227ENST00000638400 YEATS2Q9ULM3 1422 aa19.97■□□□□ 0.79
GFAP-227ENST00000638400 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
GFAP-227ENST00000638400 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
GFAP-227ENST00000638400 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
GFAP-227ENST00000638400 CDC42BPBQ9Y5S2 1711 aa19.94■□□□□ 0.78
GFAP-227ENST00000638400 ABCC1P33527 1531 aa19.94■□□□□ 0.78
GFAP-227ENST00000638400 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
GFAP-227ENST00000638400 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
GFAP-227ENST00000638400 KDM5CP41229 1560 aa19.92■□□□□ 0.78
GFAP-227ENST00000638400 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
GFAP-227ENST00000638400 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
GFAP-227ENST00000638400 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
GFAP-227ENST00000638400 ARHGEF12Q9NZN5 1544 aa19.9■□□□□ 0.78
GFAP-227ENST00000638400 ATP10AO60312 1499 aa19.88■□□□□ 0.77
GFAP-227ENST00000638400 C9orf84Q5VXU9 1444 aa19.88■□□□□ 0.77
GFAP-227ENST00000638400 TRAPPC8Q9Y2L5 1435 aa19.88■□□□□ 0.77
GFAP-227ENST00000638400 CFDP1Q9UEE9 299 aaPredicted RBP19.88■□□□□ 0.77
GFAP-227ENST00000638400 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
GFAP-227ENST00000638400 ADAMTSL3P82987 1691 aa19.87■□□□□ 0.77
GFAP-227ENST00000638400 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
GFAP-227ENST00000638400 BCORL1Q5H9F3 1711 aa19.87■□□□□ 0.77
GFAP-227ENST00000638400 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
GFAP-227ENST00000638400 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
GFAP-227ENST00000638400 MLH3Q9UHC1 1453 aa19.86■□□□□ 0.77
GFAP-227ENST00000638400 SAMD9LQ8IVG5 1584 aa19.86■□□□□ 0.77
GFAP-227ENST00000638400 ITSN2Q9NZM3 1697 aa19.85■□□□□ 0.77
GFAP-227ENST00000638400 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
GFAP-227ENST00000638400 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
GFAP-227ENST00000638400 PTPRMP28827 1452 aa19.84■□□□□ 0.77
GFAP-227ENST00000638400 KIAA1107Q9UPP5 1409 aa19.84■□□□□ 0.77
GFAP-227ENST00000638400 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
GFAP-227ENST00000638400 MADDQ8WXG6 1647 aa19.82■□□□□ 0.76
GFAP-227ENST00000638400 DIP2CQ9Y2E4 1556 aa19.82■□□□□ 0.76
GFAP-227ENST00000638400 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
GFAP-227ENST00000638400 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
GFAP-227ENST00000638400 SIGLEC1Q9BZZ2 1709 aa19.8■□□□□ 0.76
GFAP-227ENST00000638400 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
GFAP-227ENST00000638400 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
GFAP-227ENST00000638400 REREQ9P2R6 1566 aa19.78■□□□□ 0.76
GFAP-227ENST00000638400 ABCA6Q8N139 1617 aa19.78■□□□□ 0.76
GFAP-227ENST00000638400 SPAG9O60271 1321 aaKnown RBP19.77■□□□□ 0.76
GFAP-227ENST00000638400 MLECQ14165 292 aa19.77■□□□□ 0.76
GFAP-227ENST00000638400 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
GFAP-227ENST00000638400 AGLP35573 1532 aa19.73■□□□□ 0.75
GFAP-227ENST00000638400 RIMS1Q86UR5 1692 aaKnown RBP19.73■□□□□ 0.75
GFAP-227ENST00000638400 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
GFAP-227ENST00000638400 ATP7AQ04656 1500 aa19.72■□□□□ 0.75
GFAP-227ENST00000638400 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
GFAP-227ENST00000638400 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
GFAP-227ENST00000638400 INO80Q9ULG1 1556 aaPredicted RBP19.71■□□□□ 0.75
GFAP-227ENST00000638400 APLP2Q06481 763 aa19.71■□□□□ 0.75
GFAP-227ENST00000638400 CAMSAP2Q08AD1 1489 aa19.71■□□□□ 0.75
GFAP-227ENST00000638400 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
GFAP-227ENST00000638400 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
GFAP-227ENST00000638400 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
GFAP-227ENST00000638400 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
GFAP-227ENST00000638400 A2MP01023 1474 aa19.65■□□□□ 0.74
GFAP-227ENST00000638400 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
GFAP-227ENST00000638400 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
GFAP-227ENST00000638400 PLXNC1O60486 1568 aa19.63■□□□□ 0.73
GFAP-227ENST00000638400 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
GFAP-227ENST00000638400 ARHGEF5Q12774 1597 aa19.61■□□□□ 0.73
GFAP-227ENST00000638400 ESF1Q9H501 851 aaKnown RBP19.61■□□□□ 0.73
GFAP-227ENST00000638400 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
GFAP-227ENST00000638400 CNTLNQ9NXG0 1405 aa19.59■□□□□ 0.73
GFAP-227ENST00000638400 ADGBQ8N7X0 1667 aa19.57■□□□□ 0.72
GFAP-227ENST00000638400 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
GFAP-227ENST00000638400 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
GFAP-227ENST00000638400 CEBPAP49715 358 aaPredicted RBP19.56■□□□□ 0.72
GFAP-227ENST00000638400 DHX29Q7Z478 1369 aaKnown RBP19.56■□□□□ 0.72
GFAP-227ENST00000638400 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
GFAP-227ENST00000638400 GGT6Q6P531 493 aa19.51■□□□□ 0.71
GFAP-227ENST00000638400 MAST1Q9Y2H9 1570 aa19.51■□□□□ 0.71
GFAP-227ENST00000638400 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
GFAP-227ENST00000638400 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
GFAP-227ENST00000638400 HSPA2P54652 639 aa19.48■□□□□ 0.71
GFAP-227ENST00000638400 C3P01024 1663 aa19.48■□□□□ 0.71
GFAP-227ENST00000638400 UHRF1BP1Q6BDS2 1440 aa19.48■□□□□ 0.71
GFAP-227ENST00000638400 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
GFAP-227ENST00000638400 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
GFAP-227ENST00000638400 MROH2AA6NES4 1674 aa19.47■□□□□ 0.71
GFAP-227ENST00000638400 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
GFAP-227ENST00000638400 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
GFAP-227ENST00000638400 NPATQ14207 1427 aa19.46■□□□□ 0.71
GFAP-227ENST00000638400 KIF3BO15066 747 aa19.46■□□□□ 0.71
GFAP-227ENST00000638400 ABCC5O15440 1437 aa19.44■□□□□ 0.7
GFAP-227ENST00000638400 FAM135AQ9P2D6 1515 aa19.44■□□□□ 0.7
GFAP-227ENST00000638400 CLTCQ00610 1675 aaKnown RBP19.43■□□□□ 0.7
GFAP-227ENST00000638400 DAPK1P53355 1430 aa19.42■□□□□ 0.7
GFAP-227ENST00000638400 KDM5DQ9BY66 1539 aa19.41■□□□□ 0.7
GFAP-227ENST00000638400 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms