RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 ATP10BO94823 1461 aa11.4□□□□□ -0.58
GABRB3-225ENST00000638099 MIA2Q96PC5 1412 aa11.39□□□□□ -0.59
GABRB3-225ENST00000638099 DAPK1P53355 1430 aa11.39□□□□□ -0.59
GABRB3-225ENST00000638099 UACAQ9BZF9 1416 aa11.39□□□□□ -0.59
GABRB3-225ENST00000638099 ABCC5O15440 1437 aa11.38□□□□□ -0.59
GABRB3-225ENST00000638099 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
GABRB3-225ENST00000638099 ABCA8O94911 1581 aa11.37□□□□□ -0.59
GABRB3-225ENST00000638099 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
GABRB3-225ENST00000638099 CAMSAP2Q08AD1 1489 aa11.36□□□□□ -0.59
GABRB3-225ENST00000638099 TONSLQ96HA7 1378 aa11.36□□□□□ -0.59
GABRB3-225ENST00000638099 HNRNPMP52272 730 aaKnown RBP eCLIP11.35□□□□□ -0.59
GABRB3-225ENST00000638099 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-225ENST00000638099 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
GABRB3-225ENST00000638099 DENND4BO75064 1496 aaPredicted RBP11.35□□□□□ -0.59
GABRB3-225ENST00000638099 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
GABRB3-225ENST00000638099 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
GABRB3-225ENST00000638099 DNMT1P26358 1616 aaKnown RBP11.33□□□□□ -0.6
GABRB3-225ENST00000638099 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
GABRB3-225ENST00000638099 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
GABRB3-225ENST00000638099 CDC42BPAQ5VT25 1732 aa11.31□□□□□ -0.6
GABRB3-225ENST00000638099 ACIN1Q9UKV3 1341 aaKnown RBP11.3□□□□□ -0.6
GABRB3-225ENST00000638099 AKNAQ7Z591 1439 aa11.29□□□□□ -0.6
GABRB3-225ENST00000638099 ABCC10Q5T3U5 1492 aa11.29□□□□□ -0.6
GABRB3-225ENST00000638099 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
GABRB3-225ENST00000638099 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
GABRB3-225ENST00000638099 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
GABRB3-225ENST00000638099 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
GABRB3-225ENST00000638099 L3MBTL2Q969R5 705 aa11.26□□□□□ -0.61
GABRB3-225ENST00000638099 ROCK1Q13464 1354 aa11.26□□□□□ -0.61
GABRB3-225ENST00000638099 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
GABRB3-225ENST00000638099 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
GABRB3-225ENST00000638099 CENPBP07199 599 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-225ENST00000638099 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
GABRB3-225ENST00000638099 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
GABRB3-225ENST00000638099 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
GABRB3-225ENST00000638099 CLASP1Q7Z460 1538 aa11.24□□□□□ -0.61
GABRB3-225ENST00000638099 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
GABRB3-225ENST00000638099 CDC42BPBQ9Y5S2 1711 aa11.23□□□□□ -0.61
GABRB3-225ENST00000638099 PKD2Q13563 968 aa11.23□□□□□ -0.61
GABRB3-225ENST00000638099 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
GABRB3-225ENST00000638099 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
GABRB3-225ENST00000638099 ABCC2Q92887 1545 aa11.23□□□□□ -0.61
GABRB3-225ENST00000638099 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
GABRB3-225ENST00000638099 ANKRD50Q9ULJ7 1429 aa11.22□□□□□ -0.61
GABRB3-225ENST00000638099 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
GABRB3-225ENST00000638099 ARHGAP5Q13017 1502 aa11.22□□□□□ -0.61
GABRB3-225ENST00000638099 CROCC2H7BZ55 1655 aa11.22□□□□□ -0.61
GABRB3-225ENST00000638099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRB3-225ENST00000638099 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
GABRB3-225ENST00000638099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.21□□□□□ -0.61
GABRB3-225ENST00000638099 PZPP20742 1482 aa11.21□□□□□ -0.61
GABRB3-225ENST00000638099 ADGBQ8N7X0 1667 aa11.21□□□□□ -0.62
GABRB3-225ENST00000638099 NBPF8Q3BBV2 869 aa11.21□□□□□ -0.62
GABRB3-225ENST00000638099 NUP155O75694 1391 aa11.21□□□□□ -0.62
GABRB3-225ENST00000638099 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
GABRB3-225ENST00000638099 KIF15Q9NS87 1388 aa11.2□□□□□ -0.62
GABRB3-225ENST00000638099 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
GABRB3-225ENST00000638099 ZCCHC11Q5TAX3 1644 aaKnown RBP11.19□□□□□ -0.62
GABRB3-225ENST00000638099 HSPA5P11021 654 aaKnown RBP11.19□□□□□ -0.62
GABRB3-225ENST00000638099 PREX2Q70Z35 1606 aa11.18□□□□□ -0.62
GABRB3-225ENST00000638099 ADGRL2O95490 1459 aa11.18□□□□□ -0.62
GABRB3-225ENST00000638099 SENP3Q9H4L4 574 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-225ENST00000638099 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
GABRB3-225ENST00000638099 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
GABRB3-225ENST00000638099 ARHGEF12Q9NZN5 1544 aa11.15□□□□□ -0.62
GABRB3-225ENST00000638099 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
GABRB3-225ENST00000638099 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.63
GABRB3-225ENST00000638099 AFAP1Q8N556 730 aa11.15□□□□□ -0.63
GABRB3-225ENST00000638099 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
GABRB3-225ENST00000638099 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-225ENST00000638099 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
GABRB3-225ENST00000638099 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
GABRB3-225ENST00000638099 KIAA1107Q9UPP5 1409 aa11.13□□□□□ -0.63
GABRB3-225ENST00000638099 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
GABRB3-225ENST00000638099 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
GABRB3-225ENST00000638099 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
GABRB3-225ENST00000638099 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
GABRB3-225ENST00000638099 EIF4G2P78344 907 aaKnown RBP eCLIP11.12□□□□□ -0.63
GABRB3-225ENST00000638099 TRAPPC8Q9Y2L5 1435 aa11.12□□□□□ -0.63
GABRB3-225ENST00000638099 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
GABRB3-225ENST00000638099 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
GABRB3-225ENST00000638099 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
GABRB3-225ENST00000638099 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
GABRB3-225ENST00000638099 PLCH2O75038 1416 aa11.1□□□□□ -0.63
GABRB3-225ENST00000638099 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-225ENST00000638099 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
GABRB3-225ENST00000638099 ANP32CO43423 234 aa11.09□□□□□ -0.63
GABRB3-225ENST00000638099 DCAF11Q8TEB1 546 aa11.08□□□□□ -0.64
GABRB3-225ENST00000638099 RSPH4AQ5TD94 716 aa11.07□□□□□ -0.64
GABRB3-225ENST00000638099 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
GABRB3-225ENST00000638099 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
GABRB3-225ENST00000638099 WDR7Q9Y4E6 1490 aa11.06□□□□□ -0.64
GABRB3-225ENST00000638099 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
GABRB3-225ENST00000638099 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
GABRB3-225ENST00000638099 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
GABRB3-225ENST00000638099 ABCC1P33527 1531 aa11.04□□□□□ -0.64
GABRB3-225ENST00000638099 FANCAO15360 1455 aa11.03□□□□□ -0.64
GABRB3-225ENST00000638099 KIF7Q2M1P5 1343 aa11.02□□□□□ -0.64
GABRB3-225ENST00000638099 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.65
GABRB3-225ENST00000638099 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms