RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 SAMD9Q5K651 1589 aa12.47□□□□□ -0.41
CACNA1A-254ENST00000637952 HRCP23327 699 aa12.46□□□□□ -0.41
CACNA1A-254ENST00000637952 TIAM1Q13009 1591 aa12.46□□□□□ -0.42
CACNA1A-254ENST00000637952 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.42
CACNA1A-254ENST00000637952 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.42
CACNA1A-254ENST00000637952 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-254ENST00000637952 KIF3BO15066 747 aa12.45□□□□□ -0.42
CACNA1A-254ENST00000637952 WDR7Q9Y4E6 1490 aa12.44□□□□□ -0.42
CACNA1A-254ENST00000637952 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
CACNA1A-254ENST00000637952 ANKRD30AQ9BXX3 1397 aa12.43□□□□□ -0.42
CACNA1A-254ENST00000637952 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 BCANQ96GW7 911 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
CACNA1A-254ENST00000637952 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-254ENST00000637952 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
CACNA1A-254ENST00000637952 KIF14Q15058 1648 aa12.38□□□□□ -0.43
CACNA1A-254ENST00000637952 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-254ENST00000637952 ABCA8O94911 1581 aa12.38□□□□□ -0.43
CACNA1A-254ENST00000637952 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
CACNA1A-254ENST00000637952 SUPT6HQ7KZ85 1726 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-254ENST00000637952 FANCAO15360 1455 aa12.36□□□□□ -0.43
CACNA1A-254ENST00000637952 KANK1Q14678 1352 aa12.36□□□□□ -0.43
CACNA1A-254ENST00000637952 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
CACNA1A-254ENST00000637952 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
CACNA1A-254ENST00000637952 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
CACNA1A-254ENST00000637952 SHROOM2Q13796 1616 aa12.34□□□□□ -0.43
CACNA1A-254ENST00000637952 PLCH2O75038 1416 aa12.34□□□□□ -0.43
CACNA1A-254ENST00000637952 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
CACNA1A-254ENST00000637952 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
CACNA1A-254ENST00000637952 NUP155O75694 1391 aa12.33□□□□□ -0.44
CACNA1A-254ENST00000637952 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-254ENST00000637952 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-254ENST00000637952 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
CACNA1A-254ENST00000637952 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
CACNA1A-254ENST00000637952 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-254ENST00000637952 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
CACNA1A-254ENST00000637952 TEX14Q8IWB6 1497 aa12.31□□□□□ -0.44
CACNA1A-254ENST00000637952 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
CACNA1A-254ENST00000637952 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-254ENST00000637952 PKD2Q13563 968 aa12.29□□□□□ -0.44
CACNA1A-254ENST00000637952 FOXD1Q16676 465 aa12.29□□□□□ -0.44
CACNA1A-254ENST00000637952 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
CACNA1A-254ENST00000637952 ZCCHC11Q5TAX3 1644 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-254ENST00000637952 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
CACNA1A-254ENST00000637952 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
CACNA1A-254ENST00000637952 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.44
CACNA1A-254ENST00000637952 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.45
CACNA1A-254ENST00000637952 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
CACNA1A-254ENST00000637952 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
CACNA1A-254ENST00000637952 RRBP1Q9P2E9 1410 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-254ENST00000637952 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-254ENST00000637952 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
CACNA1A-254ENST00000637952 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
CACNA1A-254ENST00000637952 DAPK1P53355 1430 aa12.24□□□□□ -0.45
CACNA1A-254ENST00000637952 CCDC141Q6ZP82 1450 aa12.24□□□□□ -0.45
CACNA1A-254ENST00000637952 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
CACNA1A-254ENST00000637952 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
CACNA1A-254ENST00000637952 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
CACNA1A-254ENST00000637952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
CACNA1A-254ENST00000637952 ABCC5O15440 1437 aa12.22□□□□□ -0.45
CACNA1A-254ENST00000637952 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
CACNA1A-254ENST00000637952 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
CACNA1A-254ENST00000637952 PTPN23Q9H3S7 1636 aa12.21□□□□□ -0.45
CACNA1A-254ENST00000637952 TSPOAP1O95153 1857 aa12.2□□□□□ -0.46
CACNA1A-254ENST00000637952 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
CACNA1A-254ENST00000637952 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
CACNA1A-254ENST00000637952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
CACNA1A-254ENST00000637952 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
CACNA1A-254ENST00000637952 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
CACNA1A-254ENST00000637952 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
CACNA1A-254ENST00000637952 NEO1Q92859 1461 aa12.16□□□□□ -0.46
CACNA1A-254ENST00000637952 ITSN2Q9NZM3 1697 aa12.15□□□□□ -0.46
CACNA1A-254ENST00000637952 MAPKBP1O60336 1514 aa12.15□□□□□ -0.46
CACNA1A-254ENST00000637952 NCOA1Q15788 1441 aa12.15□□□□□ -0.46
CACNA1A-254ENST00000637952 TTC37Q6PGP7 1564 aa12.15□□□□□ -0.47
CACNA1A-254ENST00000637952 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-254ENST00000637952 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
CACNA1A-254ENST00000637952 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-254ENST00000637952 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-254ENST00000637952 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-254ENST00000637952 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
CACNA1A-254ENST00000637952 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
CACNA1A-254ENST00000637952 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
CACNA1A-254ENST00000637952 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
CACNA1A-254ENST00000637952 NAIPQ13075 1403 aa12.1□□□□□ -0.47
CACNA1A-254ENST00000637952 CNGB1Q14028 1251 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-254ENST00000637952 A2MP01023 1474 aa12.09□□□□□ -0.47
CACNA1A-254ENST00000637952 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
CACNA1A-254ENST00000637952 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-254ENST00000637952 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
CACNA1A-254ENST00000637952 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-254ENST00000637952 YEATS2Q9ULM3 1422 aa12.06□□□□□ -0.48
CACNA1A-254ENST00000637952 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
CACNA1A-254ENST00000637952 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-254ENST00000637952 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
CACNA1A-254ENST00000637952 ATP10AO60312 1499 aa12.05□□□□□ -0.48
CACNA1A-254ENST00000637952 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms