RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 DISP1Q96F81 1524 aa10.76□□□□□ -0.69
CDKL5-211ENST00000637881 UGGT2Q9NYU1 1516 aa10.76□□□□□ -0.69
CDKL5-211ENST00000637881 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
CDKL5-211ENST00000637881 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
CDKL5-211ENST00000637881 ANP32AP39687 249 aaKnown RBP10.75□□□□□ -0.69
CDKL5-211ENST00000637881 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
CDKL5-211ENST00000637881 DHX57Q6P158 1386 aaKnown RBP10.74□□□□□ -0.69
CDKL5-211ENST00000637881 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-211ENST00000637881 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
CDKL5-211ENST00000637881 SHROOM2Q13796 1616 aa10.74□□□□□ -0.69
CDKL5-211ENST00000637881 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
CDKL5-211ENST00000637881 KIAA0556O60303 1618 aa10.72□□□□□ -0.69
CDKL5-211ENST00000637881 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
CDKL5-211ENST00000637881 ARAP1Q96P48 1450 aa10.71□□□□□ -0.69
CDKL5-211ENST00000637881 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
CDKL5-211ENST00000637881 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDKL5-211ENST00000637881 KCNH8Q96L42 1107 aa10.7□□□□□ -0.7
CDKL5-211ENST00000637881 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
CDKL5-211ENST00000637881 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
CDKL5-211ENST00000637881 SAMD9Q5K651 1589 aa10.69□□□□□ -0.7
CDKL5-211ENST00000637881 PLB1Q6P1J6 1458 aa10.69□□□□□ -0.7
CDKL5-211ENST00000637881 RRP9O43818 475 aaKnown RBP10.67□□□□□ -0.7
CDKL5-211ENST00000637881 FMN1Q68DA7 1419 aa10.66□□□□□ -0.7
CDKL5-211ENST00000637881 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
CDKL5-211ENST00000637881 NEFMP07197 916 aa10.65□□□□□ -0.71
CDKL5-211ENST00000637881 FGD1P98174 961 aa10.63□□□□□ -0.71
CDKL5-211ENST00000637881 MAPK8IP2Q13387 824 aaPredicted RBP10.62□□□□□ -0.71
CDKL5-211ENST00000637881 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
CDKL5-211ENST00000637881 PDE4CQ08493 712 aa10.62□□□□□ -0.71
CDKL5-211ENST00000637881 AAMPQ13685 434 aa10.62□□□□□ -0.71
CDKL5-211ENST00000637881 GSE1Q14687 1217 aa10.62□□□□□ -0.71
CDKL5-211ENST00000637881 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
CDKL5-211ENST00000637881 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-211ENST00000637881 TIMELESSQ9UNS1 1208 aa10.6□□□□□ -0.71
CDKL5-211ENST00000637881 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
CDKL5-211ENST00000637881 ANP32CO43423 234 aa10.6□□□□□ -0.71
CDKL5-211ENST00000637881 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
CDKL5-211ENST00000637881 RAPGEF6Q8TEU7 1601 aa10.59□□□□□ -0.71
CDKL5-211ENST00000637881 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
CDKL5-211ENST00000637881 ABCA8O94911 1581 aa10.58□□□□□ -0.72
CDKL5-211ENST00000637881 PCF11O94913 1555 aaKnown RBP10.58□□□□□ -0.72
CDKL5-211ENST00000637881 ABCC2Q92887 1545 aa10.58□□□□□ -0.72
CDKL5-211ENST00000637881 ATP10BO94823 1461 aa10.58□□□□□ -0.72
CDKL5-211ENST00000637881 NUP153P49790 1475 aaKnown RBP10.58□□□□□ -0.72
CDKL5-211ENST00000637881 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
CDKL5-211ENST00000637881 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
CDKL5-211ENST00000637881 HSP90AA2PQ14568 343 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-211ENST00000637881 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
CDKL5-211ENST00000637881 CENPJQ9HC77 1338 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-211ENST00000637881 RBM10P98175 930 aaKnown RBP10.57□□□□□ -0.72
CDKL5-211ENST00000637881 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-211ENST00000637881 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
CDKL5-211ENST00000637881 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
CDKL5-211ENST00000637881 EPRSP07814 1512 aaKnown RBP10.55□□□□□ -0.72
CDKL5-211ENST00000637881 UHRF1BP1LA0JNW5 1464 aa10.55□□□□□ -0.72
CDKL5-211ENST00000637881 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
CDKL5-211ENST00000637881 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
CDKL5-211ENST00000637881 MTUS2Q5JR59 1369 aa10.53□□□□□ -0.72
CDKL5-211ENST00000637881 FAM69CQ0P6D2 419 aa10.53□□□□□ -0.72
CDKL5-211ENST00000637881 ASXL2Q76L83 1435 aa10.53□□□□□ -0.72
CDKL5-211ENST00000637881 KDM5BQ9UGL1 1544 aa10.52□□□□□ -0.73
CDKL5-211ENST00000637881 ZCCHC11Q5TAX3 1644 aaKnown RBP10.52□□□□□ -0.73
CDKL5-211ENST00000637881 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.73
CDKL5-211ENST00000637881 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
CDKL5-211ENST00000637881 DDX10Q13206 875 aaKnown RBP10.5□□□□□ -0.73
CDKL5-211ENST00000637881 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
CDKL5-211ENST00000637881 CNKSR2Q8WXI2 1034 aa10.5□□□□□ -0.73
CDKL5-211ENST00000637881 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
CDKL5-211ENST00000637881 MAPKBP1O60336 1514 aa10.5□□□□□ -0.73
CDKL5-211ENST00000637881 KCNA4P22459 653 aa10.49□□□□□ -0.73
CDKL5-211ENST00000637881 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
CDKL5-211ENST00000637881 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
CDKL5-211ENST00000637881 RRBP1Q9P2E9 1410 aaKnown RBP10.49□□□□□ -0.73
CDKL5-211ENST00000637881 LRRIQ1Q96JM4 1722 aa10.49□□□□□ -0.73
CDKL5-211ENST00000637881 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
CDKL5-211ENST00000637881 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-211ENST00000637881 WDR7Q9Y4E6 1490 aa10.47□□□□□ -0.73
CDKL5-211ENST00000637881 HNRNPUQ00839 825 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDKL5-211ENST00000637881 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
CDKL5-211ENST00000637881 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.73
CDKL5-211ENST00000637881 TIAM1Q13009 1591 aa10.46□□□□□ -0.73
CDKL5-211ENST00000637881 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.74
CDKL5-211ENST00000637881 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.74
CDKL5-211ENST00000637881 FRAT1Q92837 279 aaPredicted RBP10.46□□□□□ -0.74
CDKL5-211ENST00000637881 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
CDKL5-211ENST00000637881 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.74
CDKL5-211ENST00000637881 TCERG1O14776 1098 aaKnown RBP10.44□□□□□ -0.74
CDKL5-211ENST00000637881 MS4A1P11836 297 aa10.44□□□□□ -0.74
CDKL5-211ENST00000637881 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
CDKL5-211ENST00000637881 RNF123Q5XPI4 1314 aa10.43□□□□□ -0.74
CDKL5-211ENST00000637881 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
CDKL5-211ENST00000637881 CCNB3Q8WWL7 1395 aa10.42□□□□□ -0.74
CDKL5-211ENST00000637881 NFKBIBQ15653 356 aa10.42□□□□□ -0.74
CDKL5-211ENST00000637881 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
CDKL5-211ENST00000637881 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
CDKL5-211ENST00000637881 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
CDKL5-211ENST00000637881 KIF14Q15058 1648 aa10.41□□□□□ -0.74
CDKL5-211ENST00000637881 CLCN1P35523 988 aa10.41□□□□□ -0.74
CDKL5-211ENST00000637881 FAM50AQ14320 339 aaKnown RBP10.41□□□□□ -0.74
CDKL5-211ENST00000637881 PDCL3Q9H2J4 239 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms