RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 ZFYVE16Q7Z3T8 1539 aa37.1■■■■□ 3.53
CHRNA7-229ENST00000637552 CCDC18Q5T9S5 1454 aa37.1■■■■□ 3.53
CHRNA7-229ENST00000637552 EFCAB2Q5VUJ9 269 aa37.1■■■■□ 3.53
CHRNA7-229ENST00000637552 POGZQ7Z3K3 1410 aa37.09■■■■□ 3.53
CHRNA7-229ENST00000637552 PTPRMP28827 1452 aa37.07■■■■□ 3.53
CHRNA7-229ENST00000637552 MAGI2Q86UL8 1455 aa37.07■■■■□ 3.53
CHRNA7-229ENST00000637552 MADDQ8WXG6 1647 aa37.05■■■■□ 3.52
CHRNA7-229ENST00000637552 YEATS2Q9ULM3 1422 aa37.04■■■■□ 3.52
CHRNA7-229ENST00000637552 ARHGAP5Q13017 1502 aa37.04■■■■□ 3.52
CHRNA7-229ENST00000637552 FYCO1Q9BQS8 1478 aa37.01■■■■□ 3.52
CHRNA7-229ENST00000637552 RIMS1Q86UR5 1692 aaKnown RBP36.93■■■■□ 3.5
CHRNA7-229ENST00000637552 ZNF518AQ6AHZ1 1483 aa36.92■■■■□ 3.5
CHRNA7-229ENST00000637552 CDC42BPBQ9Y5S2 1711 aa36.91■■■■□ 3.5
CHRNA7-229ENST00000637552 PREX2Q70Z35 1606 aa36.91■■■■□ 3.5
CHRNA7-229ENST00000637552 SIGLEC1Q9BZZ2 1709 aa36.9■■■■□ 3.5
CHRNA7-229ENST00000637552 ATP10AO60312 1499 aa36.86■■■■□ 3.49
CHRNA7-229ENST00000637552 C9orf84Q5VXU9 1444 aa36.85■■■■□ 3.49
CHRNA7-229ENST00000637552 KDM5CP41229 1560 aa36.84■■■■□ 3.49
CHRNA7-229ENST00000637552 MLECQ14165 292 aa36.82■■■■□ 3.48
CHRNA7-229ENST00000637552 AFAP1Q8N556 730 aa36.81■■■■□ 3.48
CHRNA7-229ENST00000637552 MYT1LQ9UL68 1186 aa36.81■■■■□ 3.48
CHRNA7-229ENST00000637552 CDC42BPAQ5VT25 1732 aa36.79■■■■□ 3.48
CHRNA7-229ENST00000637552 ABCC1P33527 1531 aa36.79■■■■□ 3.48
CHRNA7-229ENST00000637552 FER1L4A9Z1Z3 1794 aa36.78■■■■□ 3.48
CHRNA7-229ENST00000637552 ITSN2Q9NZM3 1697 aa36.74■■■■□ 3.47
CHRNA7-229ENST00000637552 PLPPR3Q6T4P5 718 aa36.74■■■■□ 3.47
CHRNA7-229ENST00000637552 DIP2CQ9Y2E4 1556 aa36.7■■■■□ 3.47
CHRNA7-229ENST00000637552 ARHGEF12Q9NZN5 1544 aa36.69■■■■□ 3.46
CHRNA7-229ENST00000637552 TRAPPC8Q9Y2L5 1435 aa36.69■■■■□ 3.46
CHRNA7-229ENST00000637552 LMTK3Q96Q04 1460 aa36.69■■■■□ 3.46
CHRNA7-229ENST00000637552 MLH3Q9UHC1 1453 aa36.69■■■■□ 3.46
CHRNA7-229ENST00000637552 CEP162Q5TB80 1403 aa36.67■■■■□ 3.46
CHRNA7-229ENST00000637552 ABCA6Q8N139 1617 aa36.66■■■■□ 3.46
CHRNA7-229ENST00000637552 ZNF777Q9ULD5 760 aaPredicted RBP36.65■■■■□ 3.46
CHRNA7-229ENST00000637552 MTUS2Q5JR59 1369 aa36.65■■■■□ 3.46
CHRNA7-229ENST00000637552 GPATCH8Q9UKJ3 1502 aaKnown RBP36.64■■■■□ 3.46
CHRNA7-229ENST00000637552 REREQ9P2R6 1566 aa36.63■■■■□ 3.45
CHRNA7-229ENST00000637552 ILDR1Q86SU0 546 aaPredicted RBP36.62■■■■□ 3.45
CHRNA7-229ENST00000637552 SAMD9LQ8IVG5 1584 aa36.61■■■■□ 3.45
CHRNA7-229ENST00000637552 CCNB3Q8WWL7 1395 aa36.59■■■■□ 3.45
CHRNA7-229ENST00000637552 SYCP2Q9BX26 1530 aa36.58■■■■□ 3.45
CHRNA7-229ENST00000637552 KIDINS220Q9ULH0 1771 aa36.55■■■■□ 3.44
CHRNA7-229ENST00000637552 CFDP1Q9UEE9 299 aaPredicted RBP36.54■■■■□ 3.44
CHRNA7-229ENST00000637552 EHBP1L1Q8N3D4 1523 aa36.54■■■■□ 3.44
CHRNA7-229ENST00000637552 PLEKHH2Q8IVE3 1493 aa36.52■■■■□ 3.44
CHRNA7-229ENST00000637552 AGLP35573 1532 aa36.51■■■■□ 3.44
CHRNA7-229ENST00000637552 HNRNPMP52272 730 aaKnown RBP eCLIP36.48■■■■□ 3.43
CHRNA7-229ENST00000637552 HSPA2P54652 639 aa36.48■■■■□ 3.43
CHRNA7-229ENST00000637552 SPAG9O60271 1321 aaKnown RBP36.47■■■■□ 3.43
CHRNA7-229ENST00000637552 KIAA1107Q9UPP5 1409 aa36.47■■■■□ 3.43
CHRNA7-229ENST00000637552 TIAM1Q13009 1591 aa36.45■■■■□ 3.43
CHRNA7-229ENST00000637552 CEBPAP49715 358 aaPredicted RBP36.45■■■■□ 3.43
CHRNA7-229ENST00000637552 PREX1Q8TCU6 1659 aa36.43■■■■□ 3.42
CHRNA7-229ENST00000637552 ESF1Q9H501 851 aaKnown RBP36.43■■■■□ 3.42
CHRNA7-229ENST00000637552 ATP7AQ04656 1500 aa36.4■■■■□ 3.42
CHRNA7-229ENST00000637552 INO80Q9ULG1 1556 aaPredicted RBP36.36■■■■□ 3.41
CHRNA7-229ENST00000637552 LOC105371045A0A1W2PR82 267 aa36.34■■■■□ 3.41
CHRNA7-229ENST00000637552 C3P01024 1663 aa36.34■■■■□ 3.41
CHRNA7-229ENST00000637552 SUPT6HQ7KZ85 1726 aaKnown RBP36.32■■■■□ 3.4
CHRNA7-229ENST00000637552 SETD1BQ9UPS6 1966 aaKnown RBP36.31■■■■□ 3.4
CHRNA7-229ENST00000637552 UHRF1BP1Q6BDS2 1440 aa36.31■■■■□ 3.4
CHRNA7-229ENST00000637552 CNTLNQ9NXG0 1405 aa36.31■■■■□ 3.4
CHRNA7-229ENST00000637552 ZNF644Q9H582 1327 aaPredicted RBP36.31■■■■□ 3.4
CHRNA7-229ENST00000637552 VPS8Q8N3P4 1428 aa36.28■■■■□ 3.4
CHRNA7-229ENST00000637552 NCOA2Q15596 1464 aa36.28■■■■□ 3.4
CHRNA7-229ENST00000637552 A2MP01023 1474 aa36.27■■■■□ 3.4
CHRNA7-229ENST00000637552 PLXNC1O60486 1568 aa36.25■■■■□ 3.39
CHRNA7-229ENST00000637552 MBD5Q9P267 1494 aa36.24■■■■□ 3.39
CHRNA7-229ENST00000637552 ADGBQ8N7X0 1667 aa36.22■■■■□ 3.39
CHRNA7-229ENST00000637552 FBXO41Q8TF61 875 aa36.21■■■■□ 3.39
CHRNA7-229ENST00000637552 MROH2AA6NES4 1674 aa36.19■■■■□ 3.38
CHRNA7-229ENST00000637552 CAMSAP2Q08AD1 1489 aa36.18■■■■□ 3.38
CHRNA7-229ENST00000637552 RTEL1-TNFRSF6BF6WH68 1400 aa36.15■■■■□ 3.38
CHRNA7-229ENST00000637552 CCDC141Q6ZP82 1450 aa36.14■■■■□ 3.38
CHRNA7-229ENST00000637552 LRRC9Q6ZRR7 1453 aa36.14■■■■□ 3.38
CHRNA7-229ENST00000637552 CLTCQ00610 1675 aaKnown RBP36.13■■■■□ 3.37
CHRNA7-229ENST00000637552 GGT6Q6P531 493 aa36.11■■■■□ 3.37
CHRNA7-229ENST00000637552 ZMYM3Q14202 1370 aa36.11■■■■□ 3.37
CHRNA7-229ENST00000637552 STRCQ7RTU9 1775 aa36.09■■■■□ 3.37
CHRNA7-229ENST00000637552 NPATQ14207 1427 aa36.08■■■■□ 3.37
CHRNA7-229ENST00000637552 DMRT2Q9Y5R5 561 aa36.07■■■■□ 3.36
CHRNA7-229ENST00000637552 RSPH4AQ5TD94 716 aa36.06■■■■□ 3.36
CHRNA7-229ENST00000637552 MAP3K1Q13233 1512 aa36.05■■■■□ 3.36
CHRNA7-229ENST00000637552 DHX29Q7Z478 1369 aaKnown RBP36.03■■■■□ 3.36
CHRNA7-229ENST00000637552 ARHGEF5Q12774 1597 aa36.02■■■■□ 3.36
CHRNA7-229ENST00000637552 PPP6R1Q9UPN7 881 aa36.01■■■■□ 3.36
CHRNA7-229ENST00000637552 KANK4Q5T7N3 995 aaPredicted RBP35.97■■■■□ 3.35
CHRNA7-229ENST00000637552 CERKQ8TCT0 537 aa35.96■■■■□ 3.35
CHRNA7-229ENST00000637552 TSPY4P0CV99 314 aa35.95■■■■□ 3.35
CHRNA7-229ENST00000637552 TSPY10P0CW01 314 aa35.95■■■■□ 3.35
CHRNA7-229ENST00000637552 PTPRKQ15262 1439 aa35.93■■■■□ 3.34
CHRNA7-229ENST00000637552 KIF3BO15066 747 aa35.93■■■■□ 3.34
CHRNA7-229ENST00000637552 MYO3AQ8NEV4 1616 aa35.92■■■■□ 3.34
CHRNA7-229ENST00000637552 PTPRTO14522 1441 aa35.91■■■■□ 3.34
CHRNA7-229ENST00000637552 NCOA1Q15788 1441 aa35.91■■■■□ 3.34
CHRNA7-229ENST00000637552 MYOM3Q5VTT5 1437 aa35.9■■■■□ 3.34
CHRNA7-229ENST00000637552 CAMSAP1Q5T5Y3 1602 aa35.9■■■■□ 3.34
CHRNA7-229ENST00000637552 APLP2Q06481 763 aa35.88■■■■□ 3.33
CHRNA7-229ENST00000637552 MIA2Q96PC5 1412 aa35.88■■■■□ 3.33
CHRNA7-229ENST00000637552 ZNF142P52746 1687 aaPredicted RBP35.88■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms