RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 TCOF1Q13428 1488 aaKnown RBP23.33■■□□□ 1.33
CTSD-211ENST00000637387 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
CTSD-211ENST00000637387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.32■■□□□ 1.32
CTSD-211ENST00000637387 MIA2Q96PC5 1412 aa23.3■■□□□ 1.32
CTSD-211ENST00000637387 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
CTSD-211ENST00000637387 CDC42BPBQ9Y5S2 1711 aa23.29■■□□□ 1.32
CTSD-211ENST00000637387 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
CTSD-211ENST00000637387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.325e-7■■■■□ 21.6
CTSD-211ENST00000637387 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
CTSD-211ENST00000637387 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
CTSD-211ENST00000637387 KDM4FA0A1W2PPD8 638 aa23.26■■□□□ 1.31
CTSD-211ENST00000637387 ABCA9Q8IUA7 1624 aa23.25■■□□□ 1.31
CTSD-211ENST00000637387 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
CTSD-211ENST00000637387 CAMSAP2Q08AD1 1489 aa23.19■■□□□ 1.3
CTSD-211ENST00000637387 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
CTSD-211ENST00000637387 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
CTSD-211ENST00000637387 ARAP3Q8WWN8 1544 aa23.17■■□□□ 1.3
CTSD-211ENST00000637387 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
CTSD-211ENST00000637387 SAMD9LQ8IVG5 1584 aa23.16■■□□□ 1.3
CTSD-211ENST00000637387 NEO1Q92859 1461 aa23.11■■□□□ 1.29
CTSD-211ENST00000637387 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
CTSD-211ENST00000637387 GCC2Q8IWJ2 1684 aa23.1■■□□□ 1.29
CTSD-211ENST00000637387 ITGAEP38570 1179 aa23.09■■□□□ 1.29
CTSD-211ENST00000637387 ADGRL1O94910 1474 aa23.09■■□□□ 1.29
CTSD-211ENST00000637387 ADGBQ8N7X0 1667 aa23.08■■□□□ 1.28
CTSD-211ENST00000637387 DAPK1P53355 1430 aa23.08■■□□□ 1.28
CTSD-211ENST00000637387 ARHGAP5Q13017 1502 aa23.07■■□□□ 1.28
CTSD-211ENST00000637387 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
CTSD-211ENST00000637387 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
CTSD-211ENST00000637387 ABCC5O15440 1437 aa23.05■■□□□ 1.28
CTSD-211ENST00000637387 PLCH2O75038 1416 aa23.05■■□□□ 1.28
CTSD-211ENST00000637387 ABCC1P33527 1531 aa23.01■■□□□ 1.27
CTSD-211ENST00000637387 SYCP2Q9BX26 1530 aa23.01■■□□□ 1.27
CTSD-211ENST00000637387 AKNAQ7Z591 1439 aa23.01■■□□□ 1.27
CTSD-211ENST00000637387 MBD5Q9P267 1494 aa23.01■■□□□ 1.27
CTSD-211ENST00000637387 RAPGEF3O95398 923 aa23.01■■□□□ 1.27
CTSD-211ENST00000637387 HFM1A2PYH4 1435 aa23■■□□□ 1.27
CTSD-211ENST00000637387 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
CTSD-211ENST00000637387 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
CTSD-211ENST00000637387 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
CTSD-211ENST00000637387 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
CTSD-211ENST00000637387 NAIPQ13075 1403 aa22.97■■□□□ 1.27
CTSD-211ENST00000637387 FANCAO15360 1455 aa22.97■■□□□ 1.27
CTSD-211ENST00000637387 ADGRL2O95490 1459 aa22.96■■□□□ 1.27
CTSD-211ENST00000637387 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
CTSD-211ENST00000637387 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
CTSD-211ENST00000637387 CFAP74Q9C0B2 1584 aa22.94■■□□□ 1.26
CTSD-211ENST00000637387 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
CTSD-211ENST00000637387 DENND4BO75064 1496 aaPredicted RBP22.93■■□□□ 1.26
CTSD-211ENST00000637387 CCDC141Q6ZP82 1450 aa22.93■■□□□ 1.26
CTSD-211ENST00000637387 PLEKHH2Q8IVE3 1493 aa22.93■■□□□ 1.26
CTSD-211ENST00000637387 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
CTSD-211ENST00000637387 ROCK1Q13464 1354 aa22.92■■□□□ 1.26
CTSD-211ENST00000637387 RICTORQ6R327 1708 aa22.91■■□□□ 1.26
CTSD-211ENST00000637387 HRCP23327 699 aa22.88■■□□□ 1.25
CTSD-211ENST00000637387 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
CTSD-211ENST00000637387 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
CTSD-211ENST00000637387 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
CTSD-211ENST00000637387 NCOA1Q15788 1441 aa22.85■■□□□ 1.25
CTSD-211ENST00000637387 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
CTSD-211ENST00000637387 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.25
CTSD-211ENST00000637387 EFCAB2Q5VUJ9 269 aa22.84■■□□□ 1.25
CTSD-211ENST00000637387 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
CTSD-211ENST00000637387 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.25
CTSD-211ENST00000637387 ARHGEF40Q8TER5 1519 aa22.83■■□□□ 1.25
CTSD-211ENST00000637387 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
CTSD-211ENST00000637387 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
CTSD-211ENST00000637387 INO80Q9ULG1 1556 aaPredicted RBP22.81■■□□□ 1.24
CTSD-211ENST00000637387 ADAMTSL3P82987 1691 aa22.81■■□□□ 1.24
CTSD-211ENST00000637387 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
CTSD-211ENST00000637387 ZFYVE16Q7Z3T8 1539 aa22.8■■□□□ 1.24
CTSD-211ENST00000637387 POGZQ7Z3K3 1410 aa22.79■■□□□ 1.24
CTSD-211ENST00000637387 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
CTSD-211ENST00000637387 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
CTSD-211ENST00000637387 YEATS2Q9ULM3 1422 aa22.77■■□□□ 1.23
CTSD-211ENST00000637387 RSPH4AQ5TD94 716 aa22.76■■□□□ 1.23
CTSD-211ENST00000637387 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
CTSD-211ENST00000637387 KDM5CP41229 1560 aa22.75■■□□□ 1.23
CTSD-211ENST00000637387 KIDINS220Q9ULH0 1771 aa22.72■■□□□ 1.23
CTSD-211ENST00000637387 ARID4BQ4LE39 1312 aaPredicted RBP22.71■■□□□ 1.23
CTSD-211ENST00000637387 ATP7AQ04656 1500 aa22.71■■□□□ 1.23
CTSD-211ENST00000637387 PTPRMP28827 1452 aa22.71■■□□□ 1.23
CTSD-211ENST00000637387 KIF15Q9NS87 1388 aa22.7■■□□□ 1.22
CTSD-211ENST00000637387 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
CTSD-211ENST00000637387 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
CTSD-211ENST00000637387 SIGLEC1Q9BZZ2 1709 aa22.7■■□□□ 1.22
CTSD-211ENST00000637387 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
CTSD-211ENST00000637387 ZNF518AQ6AHZ1 1483 aa22.69■■□□□ 1.22
CTSD-211ENST00000637387 ANKRD50Q9ULJ7 1429 aa22.69■■□□□ 1.22
CTSD-211ENST00000637387 RTEL1-TNFRSF6BF6WH68 1400 aa22.68■■□□□ 1.22
CTSD-211ENST00000637387 MADDQ8WXG6 1647 aa22.68■■□□□ 1.22
CTSD-211ENST00000637387 AFAP1Q8N556 730 aa22.67■■□□□ 1.22
CTSD-211ENST00000637387 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
CTSD-211ENST00000637387 ATP10AO60312 1499 aa22.66■■□□□ 1.22
CTSD-211ENST00000637387 UNC13BO14795 1591 aa22.65■■□□□ 1.22
CTSD-211ENST00000637387 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.22
CTSD-211ENST00000637387 KDM5DQ9BY66 1539 aa22.64■■□□□ 1.21
CTSD-211ENST00000637387 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
CTSD-211ENST00000637387 ABCA6Q8N139 1617 aa22.61■■□□□ 1.21
CTSD-211ENST00000637387 PZPP20742 1482 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms