RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
PTPRD-215ENST00000637354 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
PTPRD-215ENST00000637354 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
PTPRD-215ENST00000637354 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
PTPRD-215ENST00000637354 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
PTPRD-215ENST00000637354 HAP1P54257 671 aaPredicted RBP11.3□□□□□ -0.6
PTPRD-215ENST00000637354 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
PTPRD-215ENST00000637354 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
PTPRD-215ENST00000637354 ERBB3P21860 1342 aa11.27□□□□□ -0.61
PTPRD-215ENST00000637354 NLRP6P59044 892 aa11.26□□□□□ -0.61
PTPRD-215ENST00000637354 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
PTPRD-215ENST00000637354 RGL2O15211 777 aa11.22□□□□□ -0.61
PTPRD-215ENST00000637354 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
PTPRD-215ENST00000637354 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
PTPRD-215ENST00000637354 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
PTPRD-215ENST00000637354 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
PTPRD-215ENST00000637354 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
PTPRD-215ENST00000637354 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
PTPRD-215ENST00000637354 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
PTPRD-215ENST00000637354 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
PTPRD-215ENST00000637354 STK25O00506 426 aa11.14□□□□□ -0.63
PTPRD-215ENST00000637354 CFAP44Q96MT7 982 aa11.13□□□□□ -0.63
PTPRD-215ENST00000637354 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
PTPRD-215ENST00000637354 PTGER2P43116 358 aa11.12□□□□□ -0.63
PTPRD-215ENST00000637354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
PTPRD-215ENST00000637354 KIF3CO14782 793 aa11.09□□□□□ -0.63
PTPRD-215ENST00000637354 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
PTPRD-215ENST00000637354 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
PTPRD-215ENST00000637354 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
PTPRD-215ENST00000637354 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
PTPRD-215ENST00000637354 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
PTPRD-215ENST00000637354 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
PTPRD-215ENST00000637354 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
PTPRD-215ENST00000637354 SLC34A2O95436 690 aa11.03□□□□□ -0.64
PTPRD-215ENST00000637354 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
PTPRD-215ENST00000637354 PBX2P40425 430 aa11□□□□□ -0.65
PTPRD-215ENST00000637354 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
PTPRD-215ENST00000637354 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTPRD-215ENST00000637354 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPRD-215ENST00000637354 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
PTPRD-215ENST00000637354 NUDT7P0C024 238 aa10.94□□□□□ -0.66
PTPRD-215ENST00000637354 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
PTPRD-215ENST00000637354 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
PTPRD-215ENST00000637354 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
PTPRD-215ENST00000637354 ANKRD13DQ6ZTN6 518 aa10.92□□□□□ -0.66
PTPRD-215ENST00000637354 BCANQ96GW7 911 aa10.92□□□□□ -0.66
PTPRD-215ENST00000637354 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
PTPRD-215ENST00000637354 LHX6Q9UPM6 363 aa10.89□□□□□ -0.67
PTPRD-215ENST00000637354 PPP1R37O75864 691 aa10.86□□□□□ -0.67
PTPRD-215ENST00000637354 PTCD2Q8WV60 388 aaKnown RBP10.86□□□□□ -0.67
PTPRD-215ENST00000637354 FOXK1P85037 733 aa10.85□□□□□ -0.67
PTPRD-215ENST00000637354 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
PTPRD-215ENST00000637354 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
PTPRD-215ENST00000637354 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
PTPRD-215ENST00000637354 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
PTPRD-215ENST00000637354 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
PTPRD-215ENST00000637354 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
PTPRD-215ENST00000637354 TBC1D12O60347 775 aa10.79□□□□□ -0.68
PTPRD-215ENST00000637354 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
PTPRD-215ENST00000637354 TK2O00142 265 aa10.78□□□□□ -0.68
PTPRD-215ENST00000637354 PLPP6Q8IY26 295 aa10.78□□□□□ -0.68
PTPRD-215ENST00000637354 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
PTPRD-215ENST00000637354 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
PTPRD-215ENST00000637354 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
PTPRD-215ENST00000637354 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
PTPRD-215ENST00000637354 DSG2Q14126 1118 aa10.73□□□□□ -0.69
PTPRD-215ENST00000637354 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-215ENST00000637354 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-215ENST00000637354 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
PTPRD-215ENST00000637354 HRO43593 1189 aa10.69□□□□□ -0.7
PTPRD-215ENST00000637354 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
PTPRD-215ENST00000637354 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
PTPRD-215ENST00000637354 PSEN2P49810 448 aa10.65□□□□□ -0.7
PTPRD-215ENST00000637354 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
PTPRD-215ENST00000637354 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
PTPRD-215ENST00000637354 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
PTPRD-215ENST00000637354 NBR1Q14596 966 aa10.62□□□□□ -0.71
PTPRD-215ENST00000637354 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
PTPRD-215ENST00000637354 STAC3Q96MF2 364 aa10.62□□□□□ -0.71
PTPRD-215ENST00000637354 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
PTPRD-215ENST00000637354 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
PTPRD-215ENST00000637354 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
PTPRD-215ENST00000637354 PDE4AP27815 886 aa10.59□□□□□ -0.71
PTPRD-215ENST00000637354 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
PTPRD-215ENST00000637354 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPRD-215ENST00000637354 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
PTPRD-215ENST00000637354 FOSBP53539 338 aa10.55□□□□□ -0.72
PTPRD-215ENST00000637354 KCTD12Q96CX2 325 aaKnown RBP10.55□□□□□ -0.72
PTPRD-215ENST00000637354 PTPREP23469 700 aa10.54□□□□□ -0.72
PTPRD-215ENST00000637354 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
PTPRD-215ENST00000637354 ANO8Q9HCE9 1232 aaPredicted RBP10.54□□□□□ -0.72
PTPRD-215ENST00000637354 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
PTPRD-215ENST00000637354 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
PTPRD-215ENST00000637354 MFSD10Q14728 455 aa10.49□□□□□ -0.73
PTPRD-215ENST00000637354 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-215ENST00000637354 EVI5O60447 810 aa10.48□□□□□ -0.73
PTPRD-215ENST00000637354 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
PTPRD-215ENST00000637354 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
PTPRD-215ENST00000637354 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
PTPRD-215ENST00000637354 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms