RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.46
CACNA1A-230ENST00000636768 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.46
CACNA1A-230ENST00000636768 ZFYVE16Q7Z3T8 1539 aa24.17■■□□□ 1.46
CACNA1A-230ENST00000636768 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
CACNA1A-230ENST00000636768 YEATS2Q9ULM3 1422 aa24.15■■□□□ 1.46
CACNA1A-230ENST00000636768 CEP162Q5TB80 1403 aa24.14■■□□□ 1.45
CACNA1A-230ENST00000636768 ZNF518AQ6AHZ1 1483 aa24.1■■□□□ 1.45
CACNA1A-230ENST00000636768 ADAMTSL3P82987 1691 aa24.1■■□□□ 1.45
CACNA1A-230ENST00000636768 BCORL1Q5H9F3 1711 aa24.09■■□□□ 1.45
CACNA1A-230ENST00000636768 PTPRMP28827 1452 aa24.08■■□□□ 1.45
CACNA1A-230ENST00000636768 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
CACNA1A-230ENST00000636768 HECW2Q9P2P5 1572 aa24.07■■□□□ 1.44
CACNA1A-230ENST00000636768 AFAP1Q8N556 730 aa24.06■■□□□ 1.44
CACNA1A-230ENST00000636768 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
CACNA1A-230ENST00000636768 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
CACNA1A-230ENST00000636768 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
CACNA1A-230ENST00000636768 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
CACNA1A-230ENST00000636768 ATP10AO60312 1499 aa24.03■■□□□ 1.44
CACNA1A-230ENST00000636768 C9orf84Q5VXU9 1444 aa24.02■■□□□ 1.44
CACNA1A-230ENST00000636768 ABCC1P33527 1531 aa24.01■■□□□ 1.43
CACNA1A-230ENST00000636768 KDM5CP41229 1560 aa24.01■■□□□ 1.43
CACNA1A-230ENST00000636768 MLECQ14165 292 aa24.01■■□□□ 1.43
CACNA1A-230ENST00000636768 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
CACNA1A-230ENST00000636768 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
CACNA1A-230ENST00000636768 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
CACNA1A-230ENST00000636768 TRAPPC8Q9Y2L5 1435 aa23.98■■□□□ 1.43
CACNA1A-230ENST00000636768 ARHGEF12Q9NZN5 1544 aa23.98■■□□□ 1.43
CACNA1A-230ENST00000636768 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-230ENST00000636768 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
CACNA1A-230ENST00000636768 SIGLEC1Q9BZZ2 1709 aa23.96■■□□□ 1.43
CACNA1A-230ENST00000636768 CFDP1Q9UEE9 299 aaPredicted RBP23.95■■□□□ 1.42
CACNA1A-230ENST00000636768 RIMS1Q86UR5 1692 aaKnown RBP23.95■■□□□ 1.42
CACNA1A-230ENST00000636768 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
CACNA1A-230ENST00000636768 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
CACNA1A-230ENST00000636768 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
CACNA1A-230ENST00000636768 ITSN2Q9NZM3 1697 aa23.93■■□□□ 1.42
CACNA1A-230ENST00000636768 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
CACNA1A-230ENST00000636768 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
CACNA1A-230ENST00000636768 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
CACNA1A-230ENST00000636768 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
CACNA1A-230ENST00000636768 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
CACNA1A-230ENST00000636768 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
CACNA1A-230ENST00000636768 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
CACNA1A-230ENST00000636768 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
CACNA1A-230ENST00000636768 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
CACNA1A-230ENST00000636768 REREQ9P2R6 1566 aa23.85■■□□□ 1.41
CACNA1A-230ENST00000636768 FER1L4A9Z1Z3 1794 aa23.84■■□□□ 1.41
CACNA1A-230ENST00000636768 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
CACNA1A-230ENST00000636768 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
CACNA1A-230ENST00000636768 KIDINS220Q9ULH0 1771 aa23.8■■□□□ 1.4
CACNA1A-230ENST00000636768 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
CACNA1A-230ENST00000636768 AGLP35573 1532 aa23.79■■□□□ 1.4
CACNA1A-230ENST00000636768 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
CACNA1A-230ENST00000636768 ESF1Q9H501 851 aaKnown RBP23.77■■□□□ 1.4
CACNA1A-230ENST00000636768 ATP7AQ04656 1500 aa23.77■■□□□ 1.4
CACNA1A-230ENST00000636768 CEBPAP49715 358 aaPredicted RBP23.76■■□□□ 1.39
CACNA1A-230ENST00000636768 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-230ENST00000636768 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
CACNA1A-230ENST00000636768 HSPA2P54652 639 aa23.72■■□□□ 1.39
CACNA1A-230ENST00000636768 INO80Q9ULG1 1556 aaPredicted RBP23.72■■□□□ 1.39
CACNA1A-230ENST00000636768 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
CACNA1A-230ENST00000636768 A2MP01023 1474 aa23.69■■□□□ 1.38
CACNA1A-230ENST00000636768 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
CACNA1A-230ENST00000636768 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
CACNA1A-230ENST00000636768 MAP3K1Q13233 1512 aa23.67■■□□□ 1.38
CACNA1A-230ENST00000636768 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
CACNA1A-230ENST00000636768 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
CACNA1A-230ENST00000636768 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
CACNA1A-230ENST00000636768 PLXNC1O60486 1568 aa23.64■■□□□ 1.37
CACNA1A-230ENST00000636768 APLP2Q06481 763 aa23.63■■□□□ 1.37
CACNA1A-230ENST00000636768 RSPH4AQ5TD94 716 aa23.63■■□□□ 1.37
CACNA1A-230ENST00000636768 UHRF1BP1Q6BDS2 1440 aa23.62■■□□□ 1.37
CACNA1A-230ENST00000636768 ILDR1Q86SU0 546 aaPredicted RBP23.61■■□□□ 1.37
CACNA1A-230ENST00000636768 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
CACNA1A-230ENST00000636768 GGT6Q6P531 493 aa23.6■■□□□ 1.37
CACNA1A-230ENST00000636768 C3P01024 1663 aa23.59■■□□□ 1.37
CACNA1A-230ENST00000636768 ADGBQ8N7X0 1667 aa23.58■■□□□ 1.37
CACNA1A-230ENST00000636768 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
CACNA1A-230ENST00000636768 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
CACNA1A-230ENST00000636768 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-230ENST00000636768 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
CACNA1A-230ENST00000636768 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
CACNA1A-230ENST00000636768 ARHGEF5Q12774 1597 aa23.55■■□□□ 1.36
CACNA1A-230ENST00000636768 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
CACNA1A-230ENST00000636768 MROH2AA6NES4 1674 aa23.52■■□□□ 1.36
CACNA1A-230ENST00000636768 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
CACNA1A-230ENST00000636768 NPATQ14207 1427 aa23.51■■□□□ 1.35
CACNA1A-230ENST00000636768 KIF3BO15066 747 aa23.5■■□□□ 1.35
CACNA1A-230ENST00000636768 CLTCQ00610 1675 aaKnown RBP23.49■■□□□ 1.35
CACNA1A-230ENST00000636768 SETD1BQ9UPS6 1966 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-230ENST00000636768 DMRT2Q9Y5R5 561 aa23.44■■□□□ 1.34
CACNA1A-230ENST00000636768 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
CACNA1A-230ENST00000636768 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
CACNA1A-230ENST00000636768 MAST1Q9Y2H9 1570 aa23.42■■□□□ 1.34
CACNA1A-230ENST00000636768 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
CACNA1A-230ENST00000636768 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
CACNA1A-230ENST00000636768 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
CACNA1A-230ENST00000636768 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
CACNA1A-230ENST00000636768 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
CACNA1A-230ENST00000636768 NCOA1Q15788 1441 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms