RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
CLN5-212ENST00000636602 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
CLN5-212ENST00000636602 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
CLN5-212ENST00000636602 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
CLN5-212ENST00000636602 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLN5-212ENST00000636602 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLN5-212ENST00000636602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.08□□□□□ -0.48
CLN5-212ENST00000636602 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
CLN5-212ENST00000636602 ZFP91Q96JP5 570 aaPredicted RBP12.08□□□□□ -0.48
CLN5-212ENST00000636602 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
CLN5-212ENST00000636602 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
CLN5-212ENST00000636602 PBX2P40425 430 aa12.02□□□□□ -0.49
CLN5-212ENST00000636602 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
CLN5-212ENST00000636602 NLRP6P59044 892 aa11.99□□□□□ -0.49
CLN5-212ENST00000636602 NUDT7P0C024 238 aa11.98□□□□□ -0.49
CLN5-212ENST00000636602 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
CLN5-212ENST00000636602 FBXO22Q8NEZ5 403 aa11.97□□□□□ -0.49
CLN5-212ENST00000636602 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.49
CLN5-212ENST00000636602 KIF3CO14782 793 aa11.95□□□□□ -0.5
CLN5-212ENST00000636602 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
CLN5-212ENST00000636602 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
CLN5-212ENST00000636602 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
CLN5-212ENST00000636602 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
CLN5-212ENST00000636602 SLC34A2O95436 690 aa11.89□□□□□ -0.51
CLN5-212ENST00000636602 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
CLN5-212ENST00000636602 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
CLN5-212ENST00000636602 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
CLN5-212ENST00000636602 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
CLN5-212ENST00000636602 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
CLN5-212ENST00000636602 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
CLN5-212ENST00000636602 PSDA5PKW4 1024 aaPredicted RBP11.79□□□□□ -0.52
CLN5-212ENST00000636602 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
CLN5-212ENST00000636602 TK2O00142 265 aa11.77□□□□□ -0.53
CLN5-212ENST00000636602 HRO43593 1189 aa11.77□□□□□ -0.53
CLN5-212ENST00000636602 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
CLN5-212ENST00000636602 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
CLN5-212ENST00000636602 STK25O00506 426 aa11.73□□□□□ -0.53
CLN5-212ENST00000636602 PSEN2P49810 448 aa11.72□□□□□ -0.53
CLN5-212ENST00000636602 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
CLN5-212ENST00000636602 PTCD2Q8WV60 388 aaKnown RBP11.68□□□□□ -0.54
CLN5-212ENST00000636602 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
CLN5-212ENST00000636602 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
CLN5-212ENST00000636602 PPP1R37O75864 691 aa11.63□□□□□ -0.55
CLN5-212ENST00000636602 RGS20O76081 388 aa11.59□□□□□ -0.55
CLN5-212ENST00000636602 PTPN5P54829 565 aa11.58□□□□□ -0.56
CLN5-212ENST00000636602 FOXK1P85037 733 aa11.58□□□□□ -0.56
CLN5-212ENST00000636602 KCNK17Q96T54 332 aa11.58□□□□□ -0.56
CLN5-212ENST00000636602 ECM2O94769 699 aaPredicted RBP11.57□□□□□ -0.56
CLN5-212ENST00000636602 IFFO2Q5TF58 517 aa11.57□□□□□ -0.56
CLN5-212ENST00000636602 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
CLN5-212ENST00000636602 TBC1D12O60347 775 aa11.56□□□□□ -0.56
CLN5-212ENST00000636602 KCNH8Q96L42 1107 aa11.56□□□□□ -0.56
CLN5-212ENST00000636602 VPS9D1Q9Y2B5 631 aa11.56□□□□□ -0.56
CLN5-212ENST00000636602 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
CLN5-212ENST00000636602 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
CLN5-212ENST00000636602 RGL2O15211 777 aa11.5□□□□□ -0.57
CLN5-212ENST00000636602 DSG2Q14126 1118 aa11.5□□□□□ -0.57
CLN5-212ENST00000636602 A0A0G2JS52 829 aa11.48□□□□□ -0.57
CLN5-212ENST00000636602 SLC4A5Q9BY07 1137 aa11.48□□□□□ -0.57
CLN5-212ENST00000636602 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
CLN5-212ENST00000636602 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
CLN5-212ENST00000636602 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
CLN5-212ENST00000636602 ZNF454Q8N9F8 522 aa11.43□□□□□ -0.58
CLN5-212ENST00000636602 PKD2Q13563 968 aa11.42□□□□□ -0.58
CLN5-212ENST00000636602 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
CLN5-212ENST00000636602 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
CLN5-212ENST00000636602 WNT2BQ93097 391 aa11.41□□□□□ -0.58
CLN5-212ENST00000636602 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
CLN5-212ENST00000636602 ZBED2Q9BTP6 218 aa11.39□□□□□ -0.59
CLN5-212ENST00000636602 PTPREP23469 700 aa11.38□□□□□ -0.59
CLN5-212ENST00000636602 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLN5-212ENST00000636602 FOSBP53539 338 aa11.36□□□□□ -0.59
CLN5-212ENST00000636602 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
CLN5-212ENST00000636602 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
CLN5-212ENST00000636602 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
CLN5-212ENST00000636602 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
CLN5-212ENST00000636602 Q6ZNB5 142 aa11.27□□□□□ -0.61
CLN5-212ENST00000636602 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
CLN5-212ENST00000636602 ADAM33Q9BZ11 813 aa11.27□□□□□ -0.61
CLN5-212ENST00000636602 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
CLN5-212ENST00000636602 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
CLN5-212ENST00000636602 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
CLN5-212ENST00000636602 EVI5O60447 810 aa11.22□□□□□ -0.61
CLN5-212ENST00000636602 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
CLN5-212ENST00000636602 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
CLN5-212ENST00000636602 PPP1R3GB7ZBB8 358 aa11.19□□□□□ -0.62
CLN5-212ENST00000636602 BCAMP50895 628 aa11.18□□□□□ -0.62
CLN5-212ENST00000636602 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
CLN5-212ENST00000636602 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
CLN5-212ENST00000636602 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
CLN5-212ENST00000636602 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
CLN5-212ENST00000636602 PDE4AP27815 886 aa11.15□□□□□ -0.62
CLN5-212ENST00000636602 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
CLN5-212ENST00000636602 COL9A1P20849 921 aa11.13□□□□□ -0.63
CLN5-212ENST00000636602 KCNC4Q03721 635 aa11.13□□□□□ -0.63
CLN5-212ENST00000636602 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
CLN5-212ENST00000636602 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
CLN5-212ENST00000636602 PCDHGA10Q9Y5H3 936 aa11.12□□□□□ -0.63
CLN5-212ENST00000636602 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CLN5-212ENST00000636602 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms