RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GGT6Q6P531 493 aa22.86■■□□□ 1.25
CACNA1A-227ENST00000636549 TAF7LQ5H9L4 462 aa22.85■■□□□ 1.25
CACNA1A-227ENST00000636549 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 CFDP1Q9UEE9 299 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 GORABQ5T7V8 394 aa22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 SAMD1Q6SPF0 538 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 FBXW7Q969H0 707 aa22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 FRAT2O75474 233 aaPredicted RBP22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 A0A0U1RQG5 324 aaPredicted RBP22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 CNKSR2Q8WXI2 1034 aa22.81■■□□□ 1.24
CACNA1A-227ENST00000636549 TOMM22Q9NS69 142 aa22.8■■□□□ 1.24
CACNA1A-227ENST00000636549 RASSF8Q8NHQ8 419 aa22.79■■□□□ 1.24
CACNA1A-227ENST00000636549 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
CACNA1A-227ENST00000636549 FOXD4L1Q9NU39 408 aa22.78■■□□□ 1.24
CACNA1A-227ENST00000636549 MEX3CQ5U5Q3 659 aaKnown RBP22.77■■□□□ 1.24
CACNA1A-227ENST00000636549 GZF1Q9H116 711 aaPredicted RBP22.75■■□□□ 1.23
CACNA1A-227ENST00000636549 GTF2E1P29083 439 aaPredicted RBP22.75■■□□□ 1.23
CACNA1A-227ENST00000636549 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-227ENST00000636549 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-227ENST00000636549 DCAF11Q8TEB1 546 aa22.72■■□□□ 1.23
CACNA1A-227ENST00000636549 NGEFQ8N5V2 710 aa22.72■■□□□ 1.23
CACNA1A-227ENST00000636549 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 MARCH6O60337 910 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 L1TD1Q5T7N2 865 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.7■■□□□ 1.22
CACNA1A-227ENST00000636549 PATL2C9JE40 543 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-227ENST00000636549 NRDCO43847 1150 aa22.69■■□□□ 1.22
CACNA1A-227ENST00000636549 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 PES1O00541 588 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 MCCP23508 829 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 KIAA1211Q6ZU35 1233 aa22.67■■□□□ 1.22
CACNA1A-227ENST00000636549 TRIM6-TRIM34B2RNG4 842 aa22.66■■□□□ 1.22
CACNA1A-227ENST00000636549 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
CACNA1A-227ENST00000636549 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD1Q16676 465 aa22.63■■□□□ 1.21
CACNA1A-227ENST00000636549 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 CWC22Q9HCG8 908 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 MSNP26038 577 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 ITPRIPQ8IWB1 547 aa22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 PPP1R1BQ9UD71 204 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 EVA1CP58658 441 aa22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
CACNA1A-227ENST00000636549 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-227ENST00000636549 TCEAL9Q9UHQ7 104 aa22.52■■□□□ 1.2
CACNA1A-227ENST00000636549 CLIP1P30622 1438 aa22.52■■□□□ 1.2
CACNA1A-227ENST00000636549 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
CACNA1A-227ENST00000636549 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-227ENST00000636549 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 CEP89Q96ST8 783 aa22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 HDGFL2Q7Z4V5 671 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 TMF1P82094 1093 aa22.49■■□□□ 1.19
CACNA1A-227ENST00000636549 NGDNQ8NEJ9 315 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-227ENST00000636549 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
CACNA1A-227ENST00000636549 KDM4AO75164 1064 aa22.48■■□□□ 1.19
CACNA1A-227ENST00000636549 MFAP1P55081 439 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-227ENST00000636549 KANK1Q14678 1352 aa22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 BCL11BQ9C0K0 894 aaPredicted RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
CACNA1A-227ENST00000636549 AMPHP49418 695 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 FOSBP53539 338 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 CLUAP1Q96AJ1 413 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 SLC4A3P48751 1232 aa22.41■■□□□ 1.18
CACNA1A-227ENST00000636549 DHX16O60231 1041 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-227ENST00000636549 CHMP4BQ9H444 224 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-227ENST00000636549 FYB1O15117 783 aa22.39■■□□□ 1.17
CACNA1A-227ENST00000636549 TPD52L1Q16890 204 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-227ENST00000636549 CCAR2Q8N163 923 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-227ENST00000636549 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
CACNA1A-227ENST00000636549 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 ELL2O00472 640 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 MS4A1P11836 297 aa22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 GPATCH3Q96I76 525 aa22.35■■□□□ 1.17
CACNA1A-227ENST00000636549 IBSPP21815 317 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-227ENST00000636549 TPM4P67936 248 aa22.34■■□□□ 1.17
CACNA1A-227ENST00000636549 RILPL2Q969X0 211 aa22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 SPAG9O60271 1321 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.31■■□□□ 1.167e-11■■■■■ 260.8
CACNA1A-227ENST00000636549 PCMTD1Q96MG8 357 aaPredicted RBP22.31■■□□□ 1.16
CACNA1A-227ENST00000636549 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-227ENST00000636549 SF3A1Q15459 793 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-227ENST00000636549 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 SMC4Q9NTJ3 1288 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 DCAF8L1A6NGE4 600 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 TNNT3P45378 269 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms