RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 SOX12O15370 315 aa9.33□□□□□ -0.92
CLN5-210ENST00000636520 CANXP27824 592 aaKnown RBP9.33□□□□□ -0.92
CLN5-210ENST00000636520 PLB1Q6P1J6 1458 aa9.32□□□□□ -0.92
CLN5-210ENST00000636520 CD109Q6YHK3 1445 aa9.32□□□□□ -0.92
CLN5-210ENST00000636520 NEFLP07196 543 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 NUDCQ9Y266 331 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 SYNJ2O15056 1496 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 ANKRD30AQ9BXX3 1397 aa9.31□□□□□ -0.92
CLN5-210ENST00000636520 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
CLN5-210ENST00000636520 GPRASP1Q5JY77 1395 aa9.3□□□□□ -0.92
CLN5-210ENST00000636520 PKD2Q13563 968 aa9.3□□□□□ -0.92
CLN5-210ENST00000636520 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
CLN5-210ENST00000636520 TONSLQ96HA7 1378 aa9.29□□□□□ -0.92
CLN5-210ENST00000636520 RAPGEF3O95398 923 aa9.29□□□□□ -0.92
CLN5-210ENST00000636520 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
CLN5-210ENST00000636520 BAG6P46379 1132 aa9.28□□□□□ -0.92
CLN5-210ENST00000636520 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLN5-210ENST00000636520 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
CLN5-210ENST00000636520 SMARCA4P51532 1647 aa9.27□□□□□ -0.92
CLN5-210ENST00000636520 POLD1P28340 1107 aa9.27□□□□□ -0.93
CLN5-210ENST00000636520 PNNQ9H307 717 aaKnown RBP9.27□□□□□ -0.93
CLN5-210ENST00000636520 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
CLN5-210ENST00000636520 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
CLN5-210ENST00000636520 SNAPC4Q5SXM2 1469 aa9.26□□□□□ -0.93
CLN5-210ENST00000636520 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
CLN5-210ENST00000636520 HSPA2P54652 639 aa9.26□□□□□ -0.93
CLN5-210ENST00000636520 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
CLN5-210ENST00000636520 MAGI1Q96QZ7 1491 aaPredicted RBP9.25□□□□□ -0.93
CLN5-210ENST00000636520 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
CLN5-210ENST00000636520 AMPHP49418 695 aa9.25□□□□□ -0.93
CLN5-210ENST00000636520 ZNF772Q68DY9 489 aaPredicted RBP9.25□□□□□ -0.93
CLN5-210ENST00000636520 MSH6P52701 1360 aa9.25□□□□□ -0.93
CLN5-210ENST00000636520 FGD5Q6ZNL6 1462 aa9.25□□□□□ -0.93
CLN5-210ENST00000636520 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
CLN5-210ENST00000636520 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CLN5-210ENST00000636520 PRDM11Q9NQV5 511 aa9.24□□□□□ -0.93
CLN5-210ENST00000636520 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
CLN5-210ENST00000636520 LOC105371045A0A1W2PR82 267 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 TERF2IPQ9NYB0 399 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 PAXIP1Q6ZW49 1069 aaPredicted RBP9.23□□□□□ -0.93
CLN5-210ENST00000636520 ESCO1Q5FWF5 840 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
CLN5-210ENST00000636520 CFTRP13569 1480 aa9.23□□□□□ -0.93
CLN5-210ENST00000636520 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
CLN5-210ENST00000636520 SLC52A1Q9NWF4 448 aa9.22□□□□□ -0.93
CLN5-210ENST00000636520 LRPPRCP42704 1394 aaKnown RBP9.22□□□□□ -0.93
CLN5-210ENST00000636520 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
CLN5-210ENST00000636520 RAD54L2Q9Y4B4 1467 aa9.22□□□□□ -0.93
CLN5-210ENST00000636520 UHRF1BP1Q6BDS2 1440 aa9.2□□□□□ -0.94
CLN5-210ENST00000636520 RAPGEF4Q8WZA2 1011 aa9.2□□□□□ -0.94
CLN5-210ENST00000636520 WDR43Q15061 677 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLN5-210ENST00000636520 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
CLN5-210ENST00000636520 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
CLN5-210ENST00000636520 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
CLN5-210ENST00000636520 C11orf95C9JLR9 678 aaPredicted RBP9.19□□□□□ -0.94
CLN5-210ENST00000636520 DENND4BO75064 1496 aaPredicted RBP9.18□□□□□ -0.94
CLN5-210ENST00000636520 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
CLN5-210ENST00000636520 USP35Q9P2H5 1018 aa9.18□□□□□ -0.94
CLN5-210ENST00000636520 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
CLN5-210ENST00000636520 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
CLN5-210ENST00000636520 LRRC59Q96AG4 307 aaKnown RBP9.17□□□□□ -0.94
CLN5-210ENST00000636520 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
CLN5-210ENST00000636520 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
CLN5-210ENST00000636520 NUP155O75694 1391 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 PLEKHH2Q8IVE3 1493 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 C8orf37Q96NL8 207 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 NLRP2Q9NX02 1062 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 RXRBP28702 533 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 C1orf141Q5JVX7 400 aa9.16□□□□□ -0.94
CLN5-210ENST00000636520 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
CLN5-210ENST00000636520 HSP90B1P14625 803 aaKnown RBP9.15□□□□□ -0.95
CLN5-210ENST00000636520 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
CLN5-210ENST00000636520 CEBPAP49715 358 aaPredicted RBP9.14□□□□□ -0.95
CLN5-210ENST00000636520 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
CLN5-210ENST00000636520 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
CLN5-210ENST00000636520 TOM1L2Q6ZVM7 507 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 LTV1Q96GA3 475 aaPredicted RBP9.13□□□□□ -0.95
CLN5-210ENST00000636520 SLC26A8Q96RN1 970 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 NLRP13Q86W25 1043 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 TTC5Q8N0Z6 440 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 STK32BQ9NY57 414 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 GPR162Q16538 588 aa9.13□□□□□ -0.95
CLN5-210ENST00000636520 CCAR1Q8IX12 1150 aaKnown RBP9.13□□□□□ -0.95
CLN5-210ENST00000636520 FANCAO15360 1455 aa9.12□□□□□ -0.95
CLN5-210ENST00000636520 CARD11Q9BXL7 1154 aa9.12□□□□□ -0.95
CLN5-210ENST00000636520 ISY1Q9ULR0 285 aaKnown RBP9.12□□□□□ -0.95
CLN5-210ENST00000636520 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
CLN5-210ENST00000636520 MYH16Q9H6N6 1097 aa9.11□□□□□ -0.95
CLN5-210ENST00000636520 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
CLN5-210ENST00000636520 TMF1P82094 1093 aa9.11□□□□□ -0.95
CLN5-210ENST00000636520 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
CLN5-210ENST00000636520 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
CLN5-210ENST00000636520 DCAF11Q8TEB1 546 aa9.1□□□□□ -0.95
CLN5-210ENST00000636520 DHX57Q6P158 1386 aaKnown RBP9.1□□□□□ -0.95
CLN5-210ENST00000636520 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms