RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 TCOF1Q13428 1488 aaKnown RBP23.29■■□□□ 1.32
CHRNA7-212ENST00000636271 ITSN2Q9NZM3 1697 aa23.27■■□□□ 1.32
CHRNA7-212ENST00000636271 PLCH2O75038 1416 aa23.25■■□□□ 1.31
CHRNA7-212ENST00000636271 PREX2Q70Z35 1606 aa23.24■■□□□ 1.31
CHRNA7-212ENST00000636271 ABCA9Q8IUA7 1624 aa23.24■■□□□ 1.31
CHRNA7-212ENST00000636271 CDC42BPBQ9Y5S2 1711 aa23.24■■□□□ 1.31
CHRNA7-212ENST00000636271 CAMSAP2Q08AD1 1489 aa23.23■■□□□ 1.31
CHRNA7-212ENST00000636271 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
CHRNA7-212ENST00000636271 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
CHRNA7-212ENST00000636271 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
CHRNA7-212ENST00000636271 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
CHRNA7-212ENST00000636271 CD109Q6YHK3 1445 aa23.17■■□□□ 1.3
CHRNA7-212ENST00000636271 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
CHRNA7-212ENST00000636271 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
CHRNA7-212ENST00000636271 HNRNPMP52272 730 aaKnown RBP eCLIP23.15■■□□□ 1.3
CHRNA7-212ENST00000636271 ABCC5O15440 1437 aa23.15■■□□□ 1.3
CHRNA7-212ENST00000636271 ARAP3Q8WWN8 1544 aa23.14■■□□□ 1.3
CHRNA7-212ENST00000636271 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
CHRNA7-212ENST00000636271 DAPK1P53355 1430 aa23.13■■□□□ 1.29
CHRNA7-212ENST00000636271 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
CHRNA7-212ENST00000636271 GLI2P10070 1586 aa23.12■■□□□ 1.29
CHRNA7-212ENST00000636271 FANCAO15360 1455 aa23.12■■□□□ 1.29
CHRNA7-212ENST00000636271 MBD5Q9P267 1494 aa23.12■■□□□ 1.29
CHRNA7-212ENST00000636271 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
CHRNA7-212ENST00000636271 DNMT1P26358 1616 aaKnown RBP23.1■■□□□ 1.29
CHRNA7-212ENST00000636271 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
CHRNA7-212ENST00000636271 ARHGEF12Q9NZN5 1544 aa23.1■■□□□ 1.29
CHRNA7-212ENST00000636271 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
CHRNA7-212ENST00000636271 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.28
CHRNA7-212ENST00000636271 MAP3K4Q9Y6R4 1608 aa23.07■■□□□ 1.28
CHRNA7-212ENST00000636271 ABCC1P33527 1531 aa23.05■■□□□ 1.28
CHRNA7-212ENST00000636271 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
CHRNA7-212ENST00000636271 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
CHRNA7-212ENST00000636271 RRP7BPQ9NSQ0 103 aa23.03■■□□□ 1.28
CHRNA7-212ENST00000636271 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
CHRNA7-212ENST00000636271 TRAPPC8Q9Y2L5 1435 aa23.02■■□□□ 1.28
CHRNA7-212ENST00000636271 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
CHRNA7-212ENST00000636271 CCDC141Q6ZP82 1450 aa23.01■■□□□ 1.27
CHRNA7-212ENST00000636271 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
CHRNA7-212ENST00000636271 SCAPERQ9BY12 1400 aa23■■□□□ 1.27
CHRNA7-212ENST00000636271 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
CHRNA7-212ENST00000636271 TSPY4P0CV99 314 aa23■■□□□ 1.27
CHRNA7-212ENST00000636271 TSPY10P0CW01 314 aa23■■□□□ 1.27
CHRNA7-212ENST00000636271 AFAP1Q8N556 730 aa23■■□□□ 1.27
CHRNA7-212ENST00000636271 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
CHRNA7-212ENST00000636271 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
CHRNA7-212ENST00000636271 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CHRNA7-212ENST00000636271 NAIPQ13075 1403 aa22.98■■□□□ 1.27
CHRNA7-212ENST00000636271 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
CHRNA7-212ENST00000636271 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
CHRNA7-212ENST00000636271 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
CHRNA7-212ENST00000636271 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
CHRNA7-212ENST00000636271 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
CHRNA7-212ENST00000636271 SHANK2Q9UPX8 1470 aa22.97■■□□□ 1.27
CHRNA7-212ENST00000636271 NEO1Q92859 1461 aa22.96■■□□□ 1.27
CHRNA7-212ENST00000636271 NCOA1Q15788 1441 aa22.96■■□□□ 1.27
CHRNA7-212ENST00000636271 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
CHRNA7-212ENST00000636271 ADGRL2O95490 1459 aa22.94■■□□□ 1.26
CHRNA7-212ENST00000636271 TSPOAP1O95153 1857 aa22.93■■□□□ 1.26
CHRNA7-212ENST00000636271 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
CHRNA7-212ENST00000636271 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
CHRNA7-212ENST00000636271 TRHP20396 242 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-212ENST00000636271 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
CHRNA7-212ENST00000636271 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.25
CHRNA7-212ENST00000636271 MAST1Q9Y2H9 1570 aa22.87■■□□□ 1.25
CHRNA7-212ENST00000636271 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
CHRNA7-212ENST00000636271 POGZQ7Z3K3 1410 aa22.87■■□□□ 1.25
CHRNA7-212ENST00000636271 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
CHRNA7-212ENST00000636271 KDM6BO15054 1643 aa22.86■■□□□ 1.25
CHRNA7-212ENST00000636271 ZNF518AQ6AHZ1 1483 aa22.86■■□□□ 1.25
CHRNA7-212ENST00000636271 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
CHRNA7-212ENST00000636271 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
CHRNA7-212ENST00000636271 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
CHRNA7-212ENST00000636271 ZFYVE16Q7Z3T8 1539 aa22.83■■□□□ 1.24
CHRNA7-212ENST00000636271 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
CHRNA7-212ENST00000636271 ANKRD50Q9ULJ7 1429 aa22.8■■□□□ 1.24
CHRNA7-212ENST00000636271 KDM5CP41229 1560 aa22.8■■□□□ 1.24
CHRNA7-212ENST00000636271 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
CHRNA7-212ENST00000636271 MYT1LQ9UL68 1186 aa22.8■■□□□ 1.24
CHRNA7-212ENST00000636271 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
CHRNA7-212ENST00000636271 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
CHRNA7-212ENST00000636271 INO80Q9ULG1 1556 aaPredicted RBP22.79■■□□□ 1.24
CHRNA7-212ENST00000636271 MLH3Q9UHC1 1453 aa22.76■■□□□ 1.23
CHRNA7-212ENST00000636271 RICTORQ6R327 1708 aa22.76■■□□□ 1.23
CHRNA7-212ENST00000636271 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
CHRNA7-212ENST00000636271 KIDINS220Q9ULH0 1771 aa22.75■■□□□ 1.23
CHRNA7-212ENST00000636271 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
CHRNA7-212ENST00000636271 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
CHRNA7-212ENST00000636271 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
CHRNA7-212ENST00000636271 YEATS2Q9ULM3 1422 aa22.69■■□□□ 1.22
CHRNA7-212ENST00000636271 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
CHRNA7-212ENST00000636271 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
CHRNA7-212ENST00000636271 ZMYM4Q5VZL5 1548 aa22.66■■□□□ 1.22
CHRNA7-212ENST00000636271 ABCA6Q8N139 1617 aa22.65■■□□□ 1.22
CHRNA7-212ENST00000636271 A2MP01023 1474 aa22.63■■□□□ 1.21
CHRNA7-212ENST00000636271 MPHOSPH9Q99550 1183 aa22.63■■□□□ 1.21
CHRNA7-212ENST00000636271 NUP155O75694 1391 aa22.62■■□□□ 1.21
CHRNA7-212ENST00000636271 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
CHRNA7-212ENST00000636271 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
CHRNA7-212ENST00000636271 KIF3BO15066 747 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms