RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PLCH2O75038 1416 aa23.56■■□□□ 1.36
CLN8-209ENST00000635970 FANCAO15360 1455 aa23.54■■□□□ 1.36
CLN8-209ENST00000635970 CFAP74Q9C0B2 1584 aa23.54■■□□□ 1.36
CLN8-209ENST00000635970 ARHGAP5Q13017 1502 aa23.53■■□□□ 1.36
CLN8-209ENST00000635970 NCOA2Q15596 1464 aa23.53■■□□□ 1.36
CLN8-209ENST00000635970 ARAP3Q8WWN8 1544 aa23.52■■□□□ 1.36
CLN8-209ENST00000635970 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
CLN8-209ENST00000635970 NEO1Q92859 1461 aa23.51■■□□□ 1.35
CLN8-209ENST00000635970 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CLN8-209ENST00000635970 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
CLN8-209ENST00000635970 CCNB3Q8WWL7 1395 aa23.48■■□□□ 1.35
CLN8-209ENST00000635970 AKNAQ7Z591 1439 aa23.46■■□□□ 1.35
CLN8-209ENST00000635970 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
CLN8-209ENST00000635970 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
CLN8-209ENST00000635970 FRMPD1Q5SYB0 1578 aa23.42■■□□□ 1.34
CLN8-209ENST00000635970 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
CLN8-209ENST00000635970 RICTORQ6R327 1708 aa23.41■■□□□ 1.34
CLN8-209ENST00000635970 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
CLN8-209ENST00000635970 ABCC1P33527 1531 aa23.4■■□□□ 1.34
CLN8-209ENST00000635970 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
CLN8-209ENST00000635970 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
CLN8-209ENST00000635970 SCAPERQ9BY12 1400 aa23.37■■□□□ 1.33
CLN8-209ENST00000635970 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
CLN8-209ENST00000635970 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
CLN8-209ENST00000635970 SYCP2Q9BX26 1530 aa23.35■■□□□ 1.33
CLN8-209ENST00000635970 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
CLN8-209ENST00000635970 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
CLN8-209ENST00000635970 POGZQ7Z3K3 1410 aa23.33■■□□□ 1.33
CLN8-209ENST00000635970 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.32
CLN8-209ENST00000635970 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
CLN8-209ENST00000635970 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
CLN8-209ENST00000635970 ZNF518AQ6AHZ1 1483 aa23.27■■□□□ 1.32
CLN8-209ENST00000635970 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
CLN8-209ENST00000635970 KDM5CP41229 1560 aa23.27■■□□□ 1.32
CLN8-209ENST00000635970 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
CLN8-209ENST00000635970 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
CLN8-209ENST00000635970 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
CLN8-209ENST00000635970 HNRNPMP52272 730 aaKnown RBP eCLIP23.25■■□□□ 1.316e-8■□□□□ 11
CLN8-209ENST00000635970 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
CLN8-209ENST00000635970 AFAP1Q8N556 730 aa23.25■■□□□ 1.31
CLN8-209ENST00000635970 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
CLN8-209ENST00000635970 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
CLN8-209ENST00000635970 HECW2Q9P2P5 1572 aa23.22■■□□□ 1.31
CLN8-209ENST00000635970 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
CLN8-209ENST00000635970 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.31
CLN8-209ENST00000635970 ZFYVE16Q7Z3T8 1539 aa23.19■■□□□ 1.3
CLN8-209ENST00000635970 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
CLN8-209ENST00000635970 KIDINS220Q9ULH0 1771 aa23.18■■□□□ 1.3
CLN8-209ENST00000635970 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
CLN8-209ENST00000635970 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
CLN8-209ENST00000635970 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
CLN8-209ENST00000635970 CCDC141Q6ZP82 1450 aa23.16■■□□□ 1.3
CLN8-209ENST00000635970 ABCA6Q8N139 1617 aa23.16■■□□□ 1.3
CLN8-209ENST00000635970 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
CLN8-209ENST00000635970 SIGLEC1Q9BZZ2 1709 aa23.14■■□□□ 1.29
CLN8-209ENST00000635970 MLH3Q9UHC1 1453 aa23.14■■□□□ 1.29
CLN8-209ENST00000635970 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.29
CLN8-209ENST00000635970 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.29
CLN8-209ENST00000635970 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
CLN8-209ENST00000635970 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
CLN8-209ENST00000635970 DNMT1P26358 1616 aaKnown RBP23.12■■□□□ 1.29
CLN8-209ENST00000635970 SPAG9O60271 1321 aaKnown RBP23.1■■□□□ 1.29
CLN8-209ENST00000635970 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
CLN8-209ENST00000635970 CCER1Q8TC90 406 aaPredicted RBP23.09■■□□□ 1.29
CLN8-209ENST00000635970 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
CLN8-209ENST00000635970 ABCC5O15440 1437 aa23.06■■□□□ 1.28
CLN8-209ENST00000635970 DAPK1P53355 1430 aa23.06■■□□□ 1.28
CLN8-209ENST00000635970 MAST1Q9Y2H9 1570 aa23.05■■□□□ 1.28
CLN8-209ENST00000635970 ATP10AO60312 1499 aa23.05■■□□□ 1.28
CLN8-209ENST00000635970 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
CLN8-209ENST00000635970 RSPH4AQ5TD94 716 aa23.03■■□□□ 1.28
CLN8-209ENST00000635970 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
CLN8-209ENST00000635970 RTEL1-TNFRSF6BF6WH68 1400 aa23.02■■□□□ 1.28
CLN8-209ENST00000635970 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
CLN8-209ENST00000635970 SHANK2Q9UPX8 1470 aa23.01■■□□□ 1.27
CLN8-209ENST00000635970 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
CLN8-209ENST00000635970 TSPY4P0CV99 314 aa23■■□□□ 1.27
CLN8-209ENST00000635970 TSPY10P0CW01 314 aa23■■□□□ 1.27
CLN8-209ENST00000635970 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
CLN8-209ENST00000635970 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
CLN8-209ENST00000635970 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
CLN8-209ENST00000635970 A2MP01023 1474 aa22.96■■□□□ 1.27
CLN8-209ENST00000635970 PTPRKQ15262 1439 aa22.95■■□□□ 1.27
CLN8-209ENST00000635970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
CLN8-209ENST00000635970 CHIC2Q9UKJ5 165 aa22.94■■□□□ 1.26
CLN8-209ENST00000635970 CENPBP07199 599 aaPredicted RBP22.93■■□□□ 1.26
CLN8-209ENST00000635970 ITGAEP38570 1179 aa22.93■■□□□ 1.26
CLN8-209ENST00000635970 AGLP35573 1532 aa22.91■■□□□ 1.26
CLN8-209ENST00000635970 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
CLN8-209ENST00000635970 ADAMTSL3P82987 1691 aa22.89■■□□□ 1.26
CLN8-209ENST00000635970 ADGRL2O95490 1459 aa22.89■■□□□ 1.25
CLN8-209ENST00000635970 MLECQ14165 292 aa22.89■■□□□ 1.25
CLN8-209ENST00000635970 MADDQ8WXG6 1647 aa22.88■■□□□ 1.25
CLN8-209ENST00000635970 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
CLN8-209ENST00000635970 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
CLN8-209ENST00000635970 KDM4FA0A1W2PPD8 638 aa22.87■■□□□ 1.25
CLN8-209ENST00000635970 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
CLN8-209ENST00000635970 NCOA1Q15788 1441 aa22.86■■□□□ 1.25
CLN8-209ENST00000635970 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
CLN8-209ENST00000635970 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms