RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
CACNB4-217ENST00000635904 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.42
CACNB4-217ENST00000635904 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
CACNB4-217ENST00000635904 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
CACNB4-217ENST00000635904 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
CACNB4-217ENST00000635904 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
CACNB4-217ENST00000635904 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
CACNB4-217ENST00000635904 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
CACNB4-217ENST00000635904 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
CACNB4-217ENST00000635904 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
CACNB4-217ENST00000635904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
CACNB4-217ENST00000635904 PPRC1Q5VV67 1664 aaKnown RBP12.43□□□□□ -0.42
CACNB4-217ENST00000635904 FANCAO15360 1455 aa12.42□□□□□ -0.42
CACNB4-217ENST00000635904 TSPOAP1O95153 1857 aa12.4□□□□□ -0.42
CACNB4-217ENST00000635904 ABCC1P33527 1531 aa12.4□□□□□ -0.42
CACNB4-217ENST00000635904 FAM50AQ14320 339 aaKnown RBP12.4□□□□□ -0.42
CACNB4-217ENST00000635904 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
CACNB4-217ENST00000635904 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
CACNB4-217ENST00000635904 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
CACNB4-217ENST00000635904 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
CACNB4-217ENST00000635904 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
CACNB4-217ENST00000635904 CFAP74Q9C0B2 1584 aa12.38□□□□□ -0.43
CACNB4-217ENST00000635904 KIAA1107Q9UPP5 1409 aa12.38□□□□□ -0.43
CACNB4-217ENST00000635904 DNMT1P26358 1616 aaKnown RBP12.38□□□□□ -0.43
CACNB4-217ENST00000635904 NEO1Q92859 1461 aa12.38□□□□□ -0.43
CACNB4-217ENST00000635904 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
CACNB4-217ENST00000635904 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
CACNB4-217ENST00000635904 ARHGEF5Q12774 1597 aa12.36□□□□□ -0.43
CACNB4-217ENST00000635904 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
CACNB4-217ENST00000635904 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
CACNB4-217ENST00000635904 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
CACNB4-217ENST00000635904 CROCC2H7BZ55 1655 aa12.35□□□□□ -0.43
CACNB4-217ENST00000635904 ABCC5O15440 1437 aa12.35□□□□□ -0.43
CACNB4-217ENST00000635904 DAPK1P53355 1430 aa12.35□□□□□ -0.43
CACNB4-217ENST00000635904 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
CACNB4-217ENST00000635904 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.439e-6■■■■□ 22.2
CACNB4-217ENST00000635904 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.43
CACNB4-217ENST00000635904 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.43
CACNB4-217ENST00000635904 TRAPPC8Q9Y2L5 1435 aa12.33□□□□□ -0.43
CACNB4-217ENST00000635904 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
CACNB4-217ENST00000635904 ITGAEP38570 1179 aa12.33□□□□□ -0.44
CACNB4-217ENST00000635904 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
CACNB4-217ENST00000635904 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
CACNB4-217ENST00000635904 RICTORQ6R327 1708 aa12.3□□□□□ -0.44
CACNB4-217ENST00000635904 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
CACNB4-217ENST00000635904 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
CACNB4-217ENST00000635904 KDM5CP41229 1560 aa12.3□□□□□ -0.44
CACNB4-217ENST00000635904 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
CACNB4-217ENST00000635904 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
CACNB4-217ENST00000635904 FRMPD1Q5SYB0 1578 aa12.29□□□□□ -0.44
CACNB4-217ENST00000635904 MAST1Q9Y2H9 1570 aa12.29□□□□□ -0.44
CACNB4-217ENST00000635904 DENND4BO75064 1496 aaPredicted RBP12.28□□□□□ -0.44
CACNB4-217ENST00000635904 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CACNB4-217ENST00000635904 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
CACNB4-217ENST00000635904 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
CACNB4-217ENST00000635904 ZFYVE16Q7Z3T8 1539 aa12.28□□□□□ -0.44
CACNB4-217ENST00000635904 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
CACNB4-217ENST00000635904 HRCP23327 699 aa12.27□□□□□ -0.44
CACNB4-217ENST00000635904 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.44
CACNB4-217ENST00000635904 ROCK1Q13464 1354 aa12.27□□□□□ -0.45
CACNB4-217ENST00000635904 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
CACNB4-217ENST00000635904 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
CACNB4-217ENST00000635904 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
CACNB4-217ENST00000635904 TSPY4P0CV99 314 aa12.26□□□□□ -0.45
CACNB4-217ENST00000635904 TSPY10P0CW01 314 aa12.26□□□□□ -0.45
CACNB4-217ENST00000635904 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 ZMYM4Q5VZL5 1548 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 NAIPQ13075 1403 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 HECW2Q9P2P5 1572 aa12.25□□□□□ -0.45
CACNB4-217ENST00000635904 GCC2Q8IWJ2 1684 aa12.24□□□□□ -0.45
CACNB4-217ENST00000635904 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
CACNB4-217ENST00000635904 MLH3Q9UHC1 1453 aa12.24□□□□□ -0.45
CACNB4-217ENST00000635904 SPAG9O60271 1321 aaKnown RBP12.24□□□□□ -0.45
CACNB4-217ENST00000635904 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
CACNB4-217ENST00000635904 ANKRD30AQ9BXX3 1397 aa12.23□□□□□ -0.45
CACNB4-217ENST00000635904 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
CACNB4-217ENST00000635904 KIF15Q9NS87 1388 aa12.21□□□□□ -0.45
CACNB4-217ENST00000635904 KDM6BO15054 1643 aa12.21□□□□□ -0.46
CACNB4-217ENST00000635904 ABCA6Q8N139 1617 aa12.21□□□□□ -0.46
CACNB4-217ENST00000635904 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
CACNB4-217ENST00000635904 RAB3GAP2Q9H2M9 1393 aa12.19□□□□□ -0.46
CACNB4-217ENST00000635904 DIP2CQ9Y2E4 1556 aa12.19□□□□□ -0.46
CACNB4-217ENST00000635904 MAGI2Q86UL8 1455 aa12.19□□□□□ -0.46
CACNB4-217ENST00000635904 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
CACNB4-217ENST00000635904 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
CACNB4-217ENST00000635904 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
CACNB4-217ENST00000635904 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
CACNB4-217ENST00000635904 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
CACNB4-217ENST00000635904 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
CACNB4-217ENST00000635904 A2MP01023 1474 aa12.14□□□□□ -0.47
CACNB4-217ENST00000635904 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
CACNB4-217ENST00000635904 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
CACNB4-217ENST00000635904 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
CACNB4-217ENST00000635904 SIGLEC1Q9BZZ2 1709 aa12.12□□□□□ -0.47
CACNB4-217ENST00000635904 BCORL1Q5H9F3 1711 aa12.12□□□□□ -0.47
CACNB4-217ENST00000635904 ATP10AO60312 1499 aa12.12□□□□□ -0.47
CACNB4-217ENST00000635904 UNC13BO14795 1591 aa12.1□□□□□ -0.47
CACNB4-217ENST00000635904 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms