RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
SPTAN1-228ENST00000635853 NRDCO43847 1150 aa12.5□□□□□ -0.41
SPTAN1-228ENST00000635853 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
SPTAN1-228ENST00000635853 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
SPTAN1-228ENST00000635853 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
SPTAN1-228ENST00000635853 ZMYND15Q9H091 742 aa12.48□□□□□ -0.41
SPTAN1-228ENST00000635853 MS4A1P11836 297 aa12.48□□□□□ -0.41
SPTAN1-228ENST00000635853 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
SPTAN1-228ENST00000635853 SOX12O15370 315 aa12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 RGS3P49796 1198 aa12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 MLECQ14165 292 aa12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 ARID3AQ99856 593 aa12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
SPTAN1-228ENST00000635853 GOLGA6L4A6NEF3 574 aa12.46□□□□□ -0.41
SPTAN1-228ENST00000635853 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.42
SPTAN1-228ENST00000635853 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.42
SPTAN1-228ENST00000635853 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 KIAA2012Q0VF49 1180 aa12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 GZF1Q9H116 711 aaPredicted RBP12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 SCRIBQ14160 1630 aa12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
SPTAN1-228ENST00000635853 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
SPTAN1-228ENST00000635853 HSCBQ8IWL3 235 aa12.44□□□□□ -0.42
SPTAN1-228ENST00000635853 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
SPTAN1-228ENST00000635853 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
SPTAN1-228ENST00000635853 G3V3G9 751 aa12.43□□□□□ -0.42
SPTAN1-228ENST00000635853 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
SPTAN1-228ENST00000635853 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
SPTAN1-228ENST00000635853 GBP4Q96PP9 640 aa12.42□□□□□ -0.42
SPTAN1-228ENST00000635853 CSB-PGBD3P0DP91 1061 aa12.42□□□□□ -0.42
SPTAN1-228ENST00000635853 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-228ENST00000635853 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
SPTAN1-228ENST00000635853 ZBED9Q6R2W3 1325 aa12.41□□□□□ -0.42
SPTAN1-228ENST00000635853 NOC3LQ8WTT2 800 aaKnown RBP12.4□□□□□ -0.42
SPTAN1-228ENST00000635853 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
SPTAN1-228ENST00000635853 PDE4CQ08493 712 aa12.4□□□□□ -0.42
SPTAN1-228ENST00000635853 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
SPTAN1-228ENST00000635853 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
SPTAN1-228ENST00000635853 MCCP23508 829 aa12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 CFDP1Q9UEE9 299 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
SPTAN1-228ENST00000635853 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
SPTAN1-228ENST00000635853 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
SPTAN1-228ENST00000635853 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
SPTAN1-228ENST00000635853 ERCC6Q03468 1493 aa12.37□□□□□ -0.43
SPTAN1-228ENST00000635853 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
SPTAN1-228ENST00000635853 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
SPTAN1-228ENST00000635853 FAM161AQ3B820 660 aa12.36□□□□□ -0.43
SPTAN1-228ENST00000635853 KANK1Q14678 1352 aa12.35□□□□□ -0.43
SPTAN1-228ENST00000635853 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
SPTAN1-228ENST00000635853 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
SPTAN1-228ENST00000635853 CSPP1Q1MSJ5 1256 aa12.35□□□□□ -0.43
SPTAN1-228ENST00000635853 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
SPTAN1-228ENST00000635853 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
SPTAN1-228ENST00000635853 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
SPTAN1-228ENST00000635853 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
SPTAN1-228ENST00000635853 MRE11P49959 708 aa12.32□□□□□ -0.44
SPTAN1-228ENST00000635853 SAFB2Q14151 953 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPTAN1-228ENST00000635853 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
SPTAN1-228ENST00000635853 TAF7LQ5H9L4 462 aa12.3□□□□□ -0.44
SPTAN1-228ENST00000635853 GORABQ5T7V8 394 aa12.3□□□□□ -0.44
SPTAN1-228ENST00000635853 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
SPTAN1-228ENST00000635853 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
SPTAN1-228ENST00000635853 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
SPTAN1-228ENST00000635853 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
SPTAN1-228ENST00000635853 RRP1P56182 461 aaKnown RBP12.29□□□□□ -0.44
SPTAN1-228ENST00000635853 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
SPTAN1-228ENST00000635853 APBB1O00213 710 aa12.27□□□□□ -0.44
SPTAN1-228ENST00000635853 TAF3Q5VWG9 929 aa12.27□□□□□ -0.44
SPTAN1-228ENST00000635853 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
SPTAN1-228ENST00000635853 HSP90B1P14625 803 aaKnown RBP12.27□□□□□ -0.45
SPTAN1-228ENST00000635853 RASSF8Q8NHQ8 419 aa12.27□□□□□ -0.45
SPTAN1-228ENST00000635853 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
SPTAN1-228ENST00000635853 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
SPTAN1-228ENST00000635853 STK26Q9P289 416 aa12.26□□□□□ -0.45
SPTAN1-228ENST00000635853 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
SPTAN1-228ENST00000635853 TMF1P82094 1093 aa12.25□□□□□ -0.45
SPTAN1-228ENST00000635853 FRAT2O75474 233 aaPredicted RBP12.25□□□□□ -0.45
SPTAN1-228ENST00000635853 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
SPTAN1-228ENST00000635853 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
SPTAN1-228ENST00000635853 CEP89Q96ST8 783 aa12.24□□□□□ -0.45
SPTAN1-228ENST00000635853 MARCH6O60337 910 aa12.24□□□□□ -0.45
SPTAN1-228ENST00000635853 R3HCC1Q9Y3T6 440 aaKnown RBP12.23□□□□□ -0.45
SPTAN1-228ENST00000635853 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
SPTAN1-228ENST00000635853 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
SPTAN1-228ENST00000635853 TPM4P67936 248 aa12.23□□□□□ -0.45
SPTAN1-228ENST00000635853 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-228ENST00000635853 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
SPTAN1-228ENST00000635853 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-228ENST00000635853 KTN1Q86UP2 1357 aaKnown RBP12.22□□□□□ -0.45
SPTAN1-228ENST00000635853 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
SPTAN1-228ENST00000635853 SOGA1O94964 1423 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms