RNA–Protein interactions for RNA: ENST00000635841.1

XIST-211, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 1,734 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-211ENST00000635841 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
XIST-211ENST00000635841 ITGAEP38570 1179 aa13.37□□□□□ -0.27
XIST-211ENST00000635841 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
XIST-211ENST00000635841 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
XIST-211ENST00000635841 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
XIST-211ENST00000635841 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
XIST-211ENST00000635841 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
XIST-211ENST00000635841 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
XIST-211ENST00000635841 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
XIST-211ENST00000635841 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.27
XIST-211ENST00000635841 PLCH2O75038 1416 aa13.33□□□□□ -0.28
XIST-211ENST00000635841 EFCAB2Q5VUJ9 269 aa13.3□□□□□ -0.28
XIST-211ENST00000635841 ARAP3Q8WWN8 1544 aa13.3□□□□□ -0.28
XIST-211ENST00000635841 SAMD9LQ8IVG5 1584 aa13.29□□□□□ -0.28
XIST-211ENST00000635841 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
XIST-211ENST00000635841 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
XIST-211ENST00000635841 GLI2P10070 1586 aa13.27□□□□□ -0.28
XIST-211ENST00000635841 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
XIST-211ENST00000635841 DAPK1P53355 1430 aa13.27□□□□□ -0.29
XIST-211ENST00000635841 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
XIST-211ENST00000635841 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.296e-16■■■■■ 35.3
XIST-211ENST00000635841 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
XIST-211ENST00000635841 ABCC5O15440 1437 aa13.26□□□□□ -0.29
XIST-211ENST00000635841 DIP2BQ9P265 1576 aa13.26□□□□□ -0.29
XIST-211ENST00000635841 FANCAO15360 1455 aa13.25□□□□□ -0.29
XIST-211ENST00000635841 CHIC2Q9UKJ5 165 aa13.25□□□□□ -0.29
XIST-211ENST00000635841 SYCP2Q9BX26 1530 aa13.24□□□□□ -0.29
XIST-211ENST00000635841 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
XIST-211ENST00000635841 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
XIST-211ENST00000635841 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
XIST-211ENST00000635841 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
XIST-211ENST00000635841 RSPH4AQ5TD94 716 aa13.23□□□□□ -0.29
XIST-211ENST00000635841 CROCC2H7BZ55 1655 aa13.23□□□□□ -0.29
XIST-211ENST00000635841 ABCC1P33527 1531 aa13.22□□□□□ -0.29
XIST-211ENST00000635841 CFAP74Q9C0B2 1584 aa13.22□□□□□ -0.29
XIST-211ENST00000635841 CCDC141Q6ZP82 1450 aa13.22□□□□□ -0.29
XIST-211ENST00000635841 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
XIST-211ENST00000635841 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
XIST-211ENST00000635841 AKNAQ7Z591 1439 aa13.21□□□□□ -0.29
XIST-211ENST00000635841 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.29
XIST-211ENST00000635841 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.3
XIST-211ENST00000635841 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
XIST-211ENST00000635841 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
XIST-211ENST00000635841 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
XIST-211ENST00000635841 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
XIST-211ENST00000635841 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
XIST-211ENST00000635841 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
XIST-211ENST00000635841 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
XIST-211ENST00000635841 RRP7BPQ9NSQ0 103 aa13.19□□□□□ -0.3
XIST-211ENST00000635841 NEO1Q92859 1461 aa13.19□□□□□ -0.3
XIST-211ENST00000635841 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
XIST-211ENST00000635841 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
XIST-211ENST00000635841 NAIPQ13075 1403 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 ADGRL2O95490 1459 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
XIST-211ENST00000635841 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
XIST-211ENST00000635841 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
XIST-211ENST00000635841 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
XIST-211ENST00000635841 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
XIST-211ENST00000635841 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
XIST-211ENST00000635841 HRCP23327 699 aa13.14□□□□□ -0.31
XIST-211ENST00000635841 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
XIST-211ENST00000635841 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
XIST-211ENST00000635841 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
XIST-211ENST00000635841 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
XIST-211ENST00000635841 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
XIST-211ENST00000635841 KIF15Q9NS87 1388 aa13.11□□□□□ -0.31
XIST-211ENST00000635841 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
XIST-211ENST00000635841 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
XIST-211ENST00000635841 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
XIST-211ENST00000635841 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
XIST-211ENST00000635841 KDM6BO15054 1643 aa13.09□□□□□ -0.31
XIST-211ENST00000635841 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
XIST-211ENST00000635841 ZFYVE16Q7Z3T8 1539 aa13.09□□□□□ -0.31
XIST-211ENST00000635841 INO80Q9ULG1 1556 aaPredicted RBP13.09□□□□□ -0.31
XIST-211ENST00000635841 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
XIST-211ENST00000635841 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
XIST-211ENST00000635841 KDM5CP41229 1560 aa13.08□□□□□ -0.32
XIST-211ENST00000635841 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
XIST-211ENST00000635841 RICTORQ6R327 1708 aa13.07□□□□□ -0.32
XIST-211ENST00000635841 DUOX2Q9NRD8 1548 aa13.06□□□□□ -0.32
XIST-211ENST00000635841 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
XIST-211ENST00000635841 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
XIST-211ENST00000635841 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
XIST-211ENST00000635841 MLH3Q9UHC1 1453 aa13.05□□□□□ -0.32
XIST-211ENST00000635841 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
XIST-211ENST00000635841 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
XIST-211ENST00000635841 ERBINQ96RT1 1412 aa13.02□□□□□ -0.32
XIST-211ENST00000635841 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
XIST-211ENST00000635841 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
XIST-211ENST00000635841 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
XIST-211ENST00000635841 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
XIST-211ENST00000635841 ABCA6Q8N139 1617 aa12.99□□□□□ -0.33
XIST-211ENST00000635841 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
XIST-211ENST00000635841 A2MP01023 1474 aa12.98□□□□□ -0.33
XIST-211ENST00000635841 MAGI2Q86UL8 1455 aa12.98□□□□□ -0.33
XIST-211ENST00000635841 NUP155O75694 1391 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms