RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 RAD21O60216 631 aa22.18■■□□□ 1.14
CACNA1A-215ENST00000635727 STK26Q9P289 416 aa22.18■■□□□ 1.14
CACNA1A-215ENST00000635727 L1TD1Q5T7N2 865 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-215ENST00000635727 FOXD4L5Q5VV16 416 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-215ENST00000635727 FOXD4L4Q8WXT5 416 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-215ENST00000635727 CARD11Q9BXL7 1154 aa22.17■■□□□ 1.14
CACNA1A-215ENST00000635727 MCCP23508 829 aa22.17■■□□□ 1.14
CACNA1A-215ENST00000635727 NOP58Q9Y2X3 529 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-215ENST00000635727 SRPK2P78362 688 aaKnown RBP22.15■■□□□ 1.14
CACNA1A-215ENST00000635727 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
CACNA1A-215ENST00000635727 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-215ENST00000635727 TAF7LQ5H9L4 462 aa22.12■■□□□ 1.13
CACNA1A-215ENST00000635727 KIAA1211Q6ZU35 1233 aa22.12■■□□□ 1.13
CACNA1A-215ENST00000635727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-215ENST00000635727 TOMM22Q9NS69 142 aa22.1■■□□□ 1.13
CACNA1A-215ENST00000635727 MARCH6O60337 910 aa22.1■■□□□ 1.13
CACNA1A-215ENST00000635727 MSH5O43196 834 aa22.1■■□□□ 1.13
CACNA1A-215ENST00000635727 CEP89Q96ST8 783 aa22.09■■□□□ 1.13
CACNA1A-215ENST00000635727 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
CACNA1A-215ENST00000635727 FRAT2O75474 233 aaPredicted RBP22.08■■□□□ 1.12
CACNA1A-215ENST00000635727 GOLGA6L1Q8N7Z2 621 aa22.06■■□□□ 1.12
CACNA1A-215ENST00000635727 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
CACNA1A-215ENST00000635727 SAMD1Q6SPF0 538 aaPredicted RBP22.05■■□□□ 1.12
CACNA1A-215ENST00000635727 SLKQ9H2G2 1235 aaPredicted RBP22.04■■□□□ 1.12
CACNA1A-215ENST00000635727 FOXD4L6Q3SYB3 417 aaPredicted RBP22.04■■□□□ 1.12
CACNA1A-215ENST00000635727 FOXD4L3Q6VB84 417 aaPredicted RBP22.04■■□□□ 1.12
CACNA1A-215ENST00000635727 BCL11BQ9C0K0 894 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-215ENST00000635727 CCAR2Q8N163 923 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-215ENST00000635727 DEKP35659 375 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-215ENST00000635727 FBXW7Q969H0 707 aa21.97■■□□□ 1.11
CACNA1A-215ENST00000635727 ITPRIPQ8IWB1 547 aa21.95■■□□□ 1.1
CACNA1A-215ENST00000635727 TPM4P67936 248 aa21.95■■□□□ 1.1
CACNA1A-215ENST00000635727 SLC4A10Q6U841 1118 aa21.95■■□□□ 1.1
CACNA1A-215ENST00000635727 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
CACNA1A-215ENST00000635727 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
CACNA1A-215ENST00000635727 GTF2E1P29083 439 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-215ENST00000635727 NUTM2FA1L443 756 aa21.92■■□□□ 1.1
CACNA1A-215ENST00000635727 TPD52L1Q16890 204 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-215ENST00000635727 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
CACNA1A-215ENST00000635727 PTMSP20962 102 aa21.92■■□□□ 1.1
CACNA1A-215ENST00000635727 MFAP1P55081 439 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-215ENST00000635727 TCEAL9Q9UHQ7 104 aa21.91■■□□□ 1.1
CACNA1A-215ENST00000635727 MORC1Q86VD1 984 aa21.9■■□□□ 1.1
CACNA1A-215ENST00000635727 NUTM2DQ5VT03 806 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-215ENST00000635727 NGEFQ8N5V2 710 aa21.87■■□□□ 1.09
CACNA1A-215ENST00000635727 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-215ENST00000635727 CHMP4BQ9H444 224 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-215ENST00000635727 CWC22Q9HCG8 908 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-215ENST00000635727 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
CACNA1A-215ENST00000635727 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
CACNA1A-215ENST00000635727 TPM3P06753 285 aa21.84■■□□□ 1.09
CACNA1A-215ENST00000635727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.84■■□□□ 1.097e-11■■■■■ 260.8
CACNA1A-215ENST00000635727 PPP4R2Q9NY27 417 aa21.84■■□□□ 1.09
CACNA1A-215ENST00000635727 SCRIBQ14160 1630 aa21.83■■□□□ 1.08
CACNA1A-215ENST00000635727 CFDP1Q9UEE9 299 aaPredicted RBP21.83■■□□□ 1.08
CACNA1A-215ENST00000635727 CTDP1Q9Y5B0 961 aaPredicted RBP21.83■■□□□ 1.08
CACNA1A-215ENST00000635727 PCMTD1Q96MG8 357 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-215ENST00000635727 MS4A1P11836 297 aa21.8■■□□□ 1.08
CACNA1A-215ENST00000635727 SF3A1Q15459 793 aaKnown RBP21.8■■□□□ 1.08
CACNA1A-215ENST00000635727 SETQ01105 290 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-215ENST00000635727 TRIM34Q9BYJ4 488 aa21.78■■□□□ 1.08
CACNA1A-215ENST00000635727 ZNF592Q92610 1267 aa21.78■■□□□ 1.08
CACNA1A-215ENST00000635727 FOSBP53539 338 aa21.77■■□□□ 1.08
CACNA1A-215ENST00000635727 GGT6Q6P531 493 aa21.77■■□□□ 1.08
CACNA1A-215ENST00000635727 GBP4Q96PP9 640 aa21.77■■□□□ 1.07
CACNA1A-215ENST00000635727 GPATCH3Q96I76 525 aa21.76■■□□□ 1.07
CACNA1A-215ENST00000635727 KDM4AO75164 1064 aa21.76■■□□□ 1.07
CACNA1A-215ENST00000635727 CALRP27797 417 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-215ENST00000635727 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-215ENST00000635727 SKIDA1Q1XH10 827 aa21.74■■□□□ 1.07
CACNA1A-215ENST00000635727 U2AF1L5P0DN76 240 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-215ENST00000635727 U2AF1Q01081 240 aaKnown RBP eCLIP21.73■■□□□ 1.07
CACNA1A-215ENST00000635727 CCDC146Q8IYE0 955 aa21.73■■□□□ 1.07
CACNA1A-215ENST00000635727 H3BQV1 296 aa21.73■■□□□ 1.07
CACNA1A-215ENST00000635727 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
CACNA1A-215ENST00000635727 DHX37Q8IY37 1157 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-215ENST00000635727 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-215ENST00000635727 MCTP1Q6DN14 999 aa21.71■■□□□ 1.07
CACNA1A-215ENST00000635727 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-215ENST00000635727 CLUAP1Q96AJ1 413 aa21.71■■□□□ 1.07
CACNA1A-215ENST00000635727 RILPL2Q969X0 211 aa21.71■■□□□ 1.07
CACNA1A-215ENST00000635727 TMF1P82094 1093 aa21.7■■□□□ 1.07
CACNA1A-215ENST00000635727 TSR1Q2NL82 804 aaKnown RBP21.7■■□□□ 1.06
CACNA1A-215ENST00000635727 VSIG10Q8N0Z9 540 aa21.7■■□□□ 1.06
CACNA1A-215ENST00000635727 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-215ENST00000635727 MTMR7Q9Y216 660 aa21.69■■□□□ 1.06
CACNA1A-215ENST00000635727 SYAP1Q96A49 352 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-215ENST00000635727 MEX3CQ5U5Q3 659 aaKnown RBP21.69■■□□□ 1.06
CACNA1A-215ENST00000635727 FOXD1Q16676 465 aa21.67■■□□□ 1.06
CACNA1A-215ENST00000635727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.67■■□□□ 1.06
CACNA1A-215ENST00000635727 RRP12Q5JTH9 1297 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-215ENST00000635727 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
CACNA1A-215ENST00000635727 EVA1CP58658 441 aa21.66■■□□□ 1.06
CACNA1A-215ENST00000635727 HDGFL2Q7Z4V5 671 aaPredicted RBP21.66■■□□□ 1.06
CACNA1A-215ENST00000635727 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
CACNA1A-215ENST00000635727 CCDC34Q96HJ3 373 aa21.64■■□□□ 1.06
CACNA1A-215ENST00000635727 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-215ENST00000635727 STK31Q9BXU1 1019 aa21.64■■□□□ 1.05
CACNA1A-215ENST00000635727 AKAP17AQ02040 695 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-215ENST00000635727 ZFYVE27Q5T4F4 411 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms