RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 MFRPQ9BY79 579 aa16.93■□□□□ 0.3
SMARCA2-245ENST00000635688 NLRP6P59044 892 aa16.91■□□□□ 0.3
SMARCA2-245ENST00000635688 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
SMARCA2-245ENST00000635688 HOXB1P14653 301 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-245ENST00000635688 SPNS2Q8IVW8 549 aa16.87■□□□□ 0.29
SMARCA2-245ENST00000635688 ZNF710Q8N1W2 664 aa16.87■□□□□ 0.29
SMARCA2-245ENST00000635688 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
SMARCA2-245ENST00000635688 KRTAP3-3Q9BYR6 98 aa16.86■□□□□ 0.29
SMARCA2-245ENST00000635688 KRTAP3-2Q9BYR7 98 aa16.86■□□□□ 0.29
SMARCA2-245ENST00000635688 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
SMARCA2-245ENST00000635688 GPR153Q6NV75 609 aa16.74■□□□□ 0.27
SMARCA2-245ENST00000635688 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
SMARCA2-245ENST00000635688 RIMBP2O15034 1052 aa16.73■□□□□ 0.27
SMARCA2-245ENST00000635688 ERBB3P21860 1342 aa16.72■□□□□ 0.27
SMARCA2-245ENST00000635688 KIF3CO14782 793 aa16.69■□□□□ 0.26
SMARCA2-245ENST00000635688 PPP1R37O75864 691 aa16.69■□□□□ 0.26
SMARCA2-245ENST00000635688 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
SMARCA2-245ENST00000635688 VARS2Q5ST30 1063 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-245ENST00000635688 C2orf72A6NCS6 295 aa16.67■□□□□ 0.26
SMARCA2-245ENST00000635688 ARSIQ5FYB1 569 aa16.66■□□□□ 0.26
SMARCA2-245ENST00000635688 KHSRPQ92945 711 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMARCA2-245ENST00000635688 HS6ST3Q8IZP7 471 aa16.56■□□□□ 0.24
SMARCA2-245ENST00000635688 NACADO15069 1562 aa16.52■□□□□ 0.24
SMARCA2-245ENST00000635688 ZNF687Q8N1G0 1237 aa16.52■□□□□ 0.24
SMARCA2-245ENST00000635688 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
SMARCA2-245ENST00000635688 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
SMARCA2-245ENST00000635688 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
SMARCA2-245ENST00000635688 NUDT7P0C024 238 aa16.46■□□□□ 0.23
SMARCA2-245ENST00000635688 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
SMARCA2-245ENST00000635688 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
SMARCA2-245ENST00000635688 SLC34A2O95436 690 aa16.43■□□□□ 0.22
SMARCA2-245ENST00000635688 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
SMARCA2-245ENST00000635688 LHX6Q9UPM6 363 aa16.37■□□□□ 0.21
SMARCA2-245ENST00000635688 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
SMARCA2-245ENST00000635688 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
SMARCA2-245ENST00000635688 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
SMARCA2-245ENST00000635688 FOXK1P85037 733 aa16.32■□□□□ 0.2
SMARCA2-245ENST00000635688 GPHNQ9NQX3 736 aaPredicted RBP16.32■□□□□ 0.2
SMARCA2-245ENST00000635688 DSG2Q14126 1118 aa16.3■□□□□ 0.2
SMARCA2-245ENST00000635688 PLPP6Q8IY26 295 aa16.3■□□□□ 0.2
SMARCA2-245ENST00000635688 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
SMARCA2-245ENST00000635688 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
SMARCA2-245ENST00000635688 RNF166Q96A37 237 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-245ENST00000635688 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
SMARCA2-245ENST00000635688 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
SMARCA2-245ENST00000635688 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
SMARCA2-245ENST00000635688 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
SMARCA2-245ENST00000635688 LSM11P83369 360 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCA2-245ENST00000635688 PBX2P40425 430 aa16.17■□□□□ 0.18
SMARCA2-245ENST00000635688 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
SMARCA2-245ENST00000635688 GTPBP6O43824 516 aaPredicted RBP16.15■□□□□ 0.18
SMARCA2-245ENST00000635688 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
SMARCA2-245ENST00000635688 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
SMARCA2-245ENST00000635688 PTGER2P43116 358 aa16.12■□□□□ 0.17
SMARCA2-245ENST00000635688 RYDENQ9NUL5 291 aaKnown RBP16.12■□□□□ 0.17
SMARCA2-245ENST00000635688 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
SMARCA2-245ENST00000635688 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
SMARCA2-245ENST00000635688 ARHGAP33O14559 1287 aa16.08■□□□□ 0.16
SMARCA2-245ENST00000635688 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMARCA2-245ENST00000635688 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-245ENST00000635688 PSEN2P49810 448 aa16.07■□□□□ 0.16
SMARCA2-245ENST00000635688 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
SMARCA2-245ENST00000635688 DMRTA1Q5VZB9 504 aa16.06■□□□□ 0.16
SMARCA2-245ENST00000635688 TBC1D12O60347 775 aa16.05■□□□□ 0.16
SMARCA2-245ENST00000635688 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
SMARCA2-245ENST00000635688 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
SMARCA2-245ENST00000635688 PDE4AP27815 886 aa15.99■□□□□ 0.15
SMARCA2-245ENST00000635688 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
SMARCA2-245ENST00000635688 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
SMARCA2-245ENST00000635688 LARP6Q9BRS8 491 aaKnown RBP15.96■□□□□ 0.15
SMARCA2-245ENST00000635688 HRO43593 1189 aa15.94■□□□□ 0.14
SMARCA2-245ENST00000635688 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
SMARCA2-245ENST00000635688 KCNK17Q96T54 332 aa15.92■□□□□ 0.14
SMARCA2-245ENST00000635688 TK2O00142 265 aa15.91■□□□□ 0.14
SMARCA2-245ENST00000635688 ZNF454Q8N9F8 522 aa15.9■□□□□ 0.14
SMARCA2-245ENST00000635688 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
SMARCA2-245ENST00000635688 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
SMARCA2-245ENST00000635688 MFSD10Q14728 455 aa15.89■□□□□ 0.13
SMARCA2-245ENST00000635688 FOSBP53539 338 aa15.87■□□□□ 0.13
SMARCA2-245ENST00000635688 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
SMARCA2-245ENST00000635688 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
SMARCA2-245ENST00000635688 EVI5O60447 810 aa15.85■□□□□ 0.13
SMARCA2-245ENST00000635688 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
SMARCA2-245ENST00000635688 VPS9D1Q9Y2B5 631 aa15.8■□□□□ 0.12
SMARCA2-245ENST00000635688 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SMARCA2-245ENST00000635688 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
SMARCA2-245ENST00000635688 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
SMARCA2-245ENST00000635688 MAP3K9P80192 1104 aa15.77■□□□□ 0.12
SMARCA2-245ENST00000635688 HCSTQ9UBK5 93 aa15.77■□□□□ 0.12
SMARCA2-245ENST00000635688 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
SMARCA2-245ENST00000635688 ADAM33Q9BZ11 813 aa15.76■□□□□ 0.11
SMARCA2-245ENST00000635688 KCTD12Q96CX2 325 aaKnown RBP15.75■□□□□ 0.11
SMARCA2-245ENST00000635688 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
SMARCA2-245ENST00000635688 PTPREP23469 700 aa15.72■□□□□ 0.11
SMARCA2-245ENST00000635688 ZDHHC16Q969W1 377 aa15.72■□□□□ 0.11
SMARCA2-245ENST00000635688 ZBED2Q9BTP6 218 aa15.71■□□□□ 0.11
SMARCA2-245ENST00000635688 SLC4A5Q9BY07 1137 aa15.7■□□□□ 0.1
SMARCA2-245ENST00000635688 BHMG1C9JSJ3 638 aaPredicted RBP15.69■□□□□ 0.1
SMARCA2-245ENST00000635688 PLA2G2EQ9NZK7 142 aa15.69■□□□□ 0.1
SMARCA2-245ENST00000635688 PCDHGA10Q9Y5H3 936 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms