RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 KTN1Q86UP2 1357 aaKnown RBP14.85□□□□□ -0.03
COL11A1-211ENST00000635193 TNNT3P45378 269 aaPredicted RBP14.85□□□□□ -0.03
COL11A1-211ENST00000635193 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
COL11A1-211ENST00000635193 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
COL11A1-211ENST00000635193 U2SURPO15042 1029 aaKnown RBP14.85□□□□□ -0.03
COL11A1-211ENST00000635193 KIAA2012Q0VF49 1180 aa14.85□□□□□ -0.03
COL11A1-211ENST00000635193 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
COL11A1-211ENST00000635193 C14orf37Q86TY3 774 aa14.83□□□□□ -0.04
COL11A1-211ENST00000635193 DRC7Q8IY82 874 aa14.81□□□□□ -0.04
COL11A1-211ENST00000635193 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
COL11A1-211ENST00000635193 RALBP1Q15311 655 aa14.81□□□□□ -0.04
COL11A1-211ENST00000635193 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
COL11A1-211ENST00000635193 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
COL11A1-211ENST00000635193 FOXD1Q16676 465 aa14.79□□□□□ -0.04
COL11A1-211ENST00000635193 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
COL11A1-211ENST00000635193 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
COL11A1-211ENST00000635193 PLEKHG5O94827 1062 aa14.77□□□□□ -0.04
COL11A1-211ENST00000635193 GSE1Q14687 1217 aa14.77□□□□□ -0.04
COL11A1-211ENST00000635193 FANCIQ9NVI1 1328 aa14.77□□□□□ -0.05
COL11A1-211ENST00000635193 POGKQ9P215 609 aa14.77□□□□□ -0.05
COL11A1-211ENST00000635193 MCCP23508 829 aa14.76□□□□□ -0.05
COL11A1-211ENST00000635193 MORC1Q86VD1 984 aa14.76□□□□□ -0.05
COL11A1-211ENST00000635193 RWDD1Q9H446 243 aaPredicted RBP14.76□□□□□ -0.05
COL11A1-211ENST00000635193 KCNJ4P48050 445 aa14.76□□□□□ -0.05
COL11A1-211ENST00000635193 CUX2O14529 1486 aa14.76□□□□□ -0.05
COL11A1-211ENST00000635193 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
COL11A1-211ENST00000635193 PKD2Q13563 968 aa14.75□□□□□ -0.05
COL11A1-211ENST00000635193 FGD1P98174 961 aa14.75□□□□□ -0.05
COL11A1-211ENST00000635193 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
COL11A1-211ENST00000635193 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
COL11A1-211ENST00000635193 IPO8O15397 1037 aaKnown RBP14.72□□□□□ -0.05
COL11A1-211ENST00000635193 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
COL11A1-211ENST00000635193 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
COL11A1-211ENST00000635193 ROCK2O75116 1388 aaKnown RBP14.71□□□□□ -0.06
COL11A1-211ENST00000635193 A0A0G2JS52 829 aa14.7□□□□□ -0.06
COL11A1-211ENST00000635193 MFAP1P55081 439 aaKnown RBP14.7□□□□□ -0.06
COL11A1-211ENST00000635193 SYAP1Q96A49 352 aaPredicted RBP14.7□□□□□ -0.06
COL11A1-211ENST00000635193 FMN1Q68DA7 1419 aa14.69□□□□□ -0.06
COL11A1-211ENST00000635193 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
COL11A1-211ENST00000635193 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
COL11A1-211ENST00000635193 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
COL11A1-211ENST00000635193 L3MBTL2Q969R5 705 aa14.69□□□□□ -0.06
COL11A1-211ENST00000635193 NAP1L2Q9ULW6 460 aaPredicted RBP14.68□□□□□ -0.06
COL11A1-211ENST00000635193 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
COL11A1-211ENST00000635193 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
COL11A1-211ENST00000635193 PDE4AP27815 886 aa14.67□□□□□ -0.06
COL11A1-211ENST00000635193 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
COL11A1-211ENST00000635193 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
COL11A1-211ENST00000635193 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
COL11A1-211ENST00000635193 APBB1O00213 710 aa14.65□□□□□ -0.06
COL11A1-211ENST00000635193 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
COL11A1-211ENST00000635193 KANK1Q14678 1352 aa14.64□□□□□ -0.07
COL11A1-211ENST00000635193 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
COL11A1-211ENST00000635193 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL11A1-211ENST00000635193 ZBED9Q6R2W3 1325 aa14.63□□□□□ -0.07
COL11A1-211ENST00000635193 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
COL11A1-211ENST00000635193 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
COL11A1-211ENST00000635193 FAM161AQ3B820 660 aa14.61□□□□□ -0.07
COL11A1-211ENST00000635193 NUP155O75694 1391 aa14.61□□□□□ -0.07
COL11A1-211ENST00000635193 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
COL11A1-211ENST00000635193 CENPQQ7L2Z9 268 aaPredicted RBP14.61□□□□□ -0.07
COL11A1-211ENST00000635193 PKNOX2Q96KN3 472 aa14.61□□□□□ -0.07
COL11A1-211ENST00000635193 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
COL11A1-211ENST00000635193 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
COL11A1-211ENST00000635193 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
COL11A1-211ENST00000635193 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
COL11A1-211ENST00000635193 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
COL11A1-211ENST00000635193 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
COL11A1-211ENST00000635193 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
COL11A1-211ENST00000635193 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
COL11A1-211ENST00000635193 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
COL11A1-211ENST00000635193 CCDC146Q8IYE0 955 aa14.59□□□□□ -0.07
COL11A1-211ENST00000635193 CLUAP1Q96AJ1 413 aa14.59□□□□□ -0.07
COL11A1-211ENST00000635193 SMC4Q9NTJ3 1288 aa14.59□□□□□ -0.07
COL11A1-211ENST00000635193 SAFB2Q14151 953 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL11A1-211ENST00000635193 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.07
COL11A1-211ENST00000635193 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
COL11A1-211ENST00000635193 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
COL11A1-211ENST00000635193 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
COL11A1-211ENST00000635193 ZNF771Q7L3S4 317 aaPredicted RBP14.56□□□□□ -0.08
COL11A1-211ENST00000635193 PLIN1O60240 522 aa14.56□□□□□ -0.08
COL11A1-211ENST00000635193 RTF1Q92541 710 aaKnown RBP14.56□□□□□ -0.08
COL11A1-211ENST00000635193 FAM13BQ9NYF5 915 aa14.55□□□□□ -0.08
COL11A1-211ENST00000635193 HDGFL2Q7Z4V5 671 aaPredicted RBP14.55□□□□□ -0.08
COL11A1-211ENST00000635193 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
COL11A1-211ENST00000635193 PHF14O94880 888 aa14.54□□□□□ -0.08
COL11A1-211ENST00000635193 SOX12O15370 315 aa14.54□□□□□ -0.08
COL11A1-211ENST00000635193 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
COL11A1-211ENST00000635193 EIF3AQ14152 1382 aaKnown RBP14.54□□□□□ -0.08
COL11A1-211ENST00000635193 HTATSF1O43719 755 aaKnown RBP14.54□□□□□ -0.08
COL11A1-211ENST00000635193 SKOR2Q2VWA4 1001 aaPredicted RBP14.54□□□□□ -0.08
COL11A1-211ENST00000635193 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
COL11A1-211ENST00000635193 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.08
COL11A1-211ENST00000635193 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
COL11A1-211ENST00000635193 TPM4P67936 248 aa14.51□□□□□ -0.09
COL11A1-211ENST00000635193 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.5□□□□□ -0.09
COL11A1-211ENST00000635193 STK26Q9P289 416 aa14.5□□□□□ -0.09
COL11A1-211ENST00000635193 GNL2Q13823 731 aaKnown RBP14.5□□□□□ -0.09
COL11A1-211ENST00000635193 ST18O60284 1047 aa14.5□□□□□ -0.09
COL11A1-211ENST00000635193 FAM43AQ8N2R8 423 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms