RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PLCH2O75038 1416 aa22.14■■□□□ 1.13
LINC00339-208ENST00000634934 CDC42BPAQ5VT25 1732 aa22.12■■□□□ 1.13
LINC00339-208ENST00000634934 CDC42BPBQ9Y5S2 1711 aa22.12■■□□□ 1.13
LINC00339-208ENST00000634934 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
LINC00339-208ENST00000634934 NEO1Q92859 1461 aa22.11■■□□□ 1.13
LINC00339-208ENST00000634934 PREX2Q70Z35 1606 aa22.11■■□□□ 1.13
LINC00339-208ENST00000634934 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
LINC00339-208ENST00000634934 CFAP74Q9C0B2 1584 aa22.1■■□□□ 1.13
LINC00339-208ENST00000634934 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
LINC00339-208ENST00000634934 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
LINC00339-208ENST00000634934 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
LINC00339-208ENST00000634934 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
LINC00339-208ENST00000634934 AKNAQ7Z591 1439 aa22.08■■□□□ 1.12
LINC00339-208ENST00000634934 MIA2Q96PC5 1412 aa22.07■■□□□ 1.12
LINC00339-208ENST00000634934 ZNF644Q9H582 1327 aaPredicted RBP22.05■■□□□ 1.12
LINC00339-208ENST00000634934 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
LINC00339-208ENST00000634934 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
LINC00339-208ENST00000634934 RAPGEF3O95398 923 aa22.03■■□□□ 1.12
LINC00339-208ENST00000634934 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
LINC00339-208ENST00000634934 RICTORQ6R327 1708 aa22.01■■□□□ 1.11
LINC00339-208ENST00000634934 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
LINC00339-208ENST00000634934 PTPN23Q9H3S7 1636 aa22■■□□□ 1.11
LINC00339-208ENST00000634934 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
LINC00339-208ENST00000634934 SCAPERQ9BY12 1400 aa21.98■■□□□ 1.11
LINC00339-208ENST00000634934 DENND4BO75064 1496 aaPredicted RBP21.98■■□□□ 1.11
LINC00339-208ENST00000634934 SAMD9LQ8IVG5 1584 aa21.98■■□□□ 1.11
LINC00339-208ENST00000634934 HNRNPMP52272 730 aaKnown RBP eCLIP21.96■■□□□ 1.11
LINC00339-208ENST00000634934 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
LINC00339-208ENST00000634934 ABCC1P33527 1531 aa21.96■■□□□ 1.11
LINC00339-208ENST00000634934 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.1
LINC00339-208ENST00000634934 ARHGEF12Q9NZN5 1544 aa21.94■■□□□ 1.1
LINC00339-208ENST00000634934 HRCP23327 699 aa21.94■■□□□ 1.1
LINC00339-208ENST00000634934 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
LINC00339-208ENST00000634934 ITGAEP38570 1179 aa21.92■■□□□ 1.1
LINC00339-208ENST00000634934 SYCP2Q9BX26 1530 aa21.92■■□□□ 1.1
LINC00339-208ENST00000634934 KIAA1107Q9UPP5 1409 aa21.92■■□□□ 1.1
LINC00339-208ENST00000634934 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
LINC00339-208ENST00000634934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC00339-208ENST00000634934 TRAPPC8Q9Y2L5 1435 aa21.88■■□□□ 1.09
LINC00339-208ENST00000634934 AFAP1Q8N556 730 aa21.88■■□□□ 1.09
LINC00339-208ENST00000634934 ZMYM4Q5VZL5 1548 aa21.88■■□□□ 1.09
LINC00339-208ENST00000634934 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
LINC00339-208ENST00000634934 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
LINC00339-208ENST00000634934 ZNF518AQ6AHZ1 1483 aa21.86■■□□□ 1.09
LINC00339-208ENST00000634934 KDM5CP41229 1560 aa21.85■■□□□ 1.09
LINC00339-208ENST00000634934 ABCC5O15440 1437 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 DAPK1P53355 1430 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 CCDC141Q6ZP82 1450 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 TSPY4P0CV99 314 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 TSPY10P0CW01 314 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 ARHGEF40Q8TER5 1519 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 YEATS2Q9ULM3 1422 aa21.84■■□□□ 1.09
LINC00339-208ENST00000634934 ARHGEF5Q12774 1597 aa21.83■■□□□ 1.09
LINC00339-208ENST00000634934 ZFYVE16Q7Z3T8 1539 aa21.82■■□□□ 1.08
LINC00339-208ENST00000634934 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
LINC00339-208ENST00000634934 DNMT1P26358 1616 aaKnown RBP21.82■■□□□ 1.08
LINC00339-208ENST00000634934 HECW2Q9P2P5 1572 aa21.81■■□□□ 1.08
LINC00339-208ENST00000634934 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
LINC00339-208ENST00000634934 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
LINC00339-208ENST00000634934 PTPRKQ15262 1439 aa21.78■■□□□ 1.08
LINC00339-208ENST00000634934 SIGLEC1Q9BZZ2 1709 aa21.78■■□□□ 1.08
LINC00339-208ENST00000634934 MAGI2Q86UL8 1455 aa21.78■■□□□ 1.08
LINC00339-208ENST00000634934 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
LINC00339-208ENST00000634934 KIDINS220Q9ULH0 1771 aa21.76■■□□□ 1.07
LINC00339-208ENST00000634934 ABCA6Q8N139 1617 aa21.76■■□□□ 1.07
LINC00339-208ENST00000634934 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
LINC00339-208ENST00000634934 MLH3Q9UHC1 1453 aa21.75■■□□□ 1.07
LINC00339-208ENST00000634934 SHANK2Q9UPX8 1470 aa21.75■■□□□ 1.07
LINC00339-208ENST00000634934 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
LINC00339-208ENST00000634934 CROCC2H7BZ55 1655 aa21.73■■□□□ 1.07
LINC00339-208ENST00000634934 INO80Q9ULG1 1556 aaPredicted RBP21.73■■□□□ 1.07
LINC00339-208ENST00000634934 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
LINC00339-208ENST00000634934 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.07
LINC00339-208ENST00000634934 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
LINC00339-208ENST00000634934 KDM4FA0A1W2PPD8 638 aa21.7■■□□□ 1.06
LINC00339-208ENST00000634934 ATP10AO60312 1499 aa21.7■■□□□ 1.06
LINC00339-208ENST00000634934 RTEL1-TNFRSF6BF6WH68 1400 aa21.69■■□□□ 1.06
LINC00339-208ENST00000634934 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
LINC00339-208ENST00000634934 ROCK1Q13464 1354 aa21.68■■□□□ 1.06
LINC00339-208ENST00000634934 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
LINC00339-208ENST00000634934 NCOA1Q15788 1441 aa21.66■■□□□ 1.06
LINC00339-208ENST00000634934 ADGRL2O95490 1459 aa21.66■■□□□ 1.06
LINC00339-208ENST00000634934 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
LINC00339-208ENST00000634934 ADGBQ8N7X0 1667 aa21.64■■□□□ 1.06
LINC00339-208ENST00000634934 BCORL1Q5H9F3 1711 aa21.64■■□□□ 1.05
LINC00339-208ENST00000634934 REREQ9P2R6 1566 aa21.62■■□□□ 1.05
LINC00339-208ENST00000634934 PLXNC1O60486 1568 aa21.61■■□□□ 1.05
LINC00339-208ENST00000634934 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
LINC00339-208ENST00000634934 ADAMTSL3P82987 1691 aa21.59■■□□□ 1.05
LINC00339-208ENST00000634934 NAIPQ13075 1403 aa21.59■■□□□ 1.05
LINC00339-208ENST00000634934 MLECQ14165 292 aa21.59■■□□□ 1.05
LINC00339-208ENST00000634934 MADDQ8WXG6 1647 aa21.58■■□□□ 1.04
LINC00339-208ENST00000634934 A2MP01023 1474 aa21.57■■□□□ 1.04
LINC00339-208ENST00000634934 SETD5Q9C0A6 1442 aa21.56■■□□□ 1.04
LINC00339-208ENST00000634934 DUOX2Q9NRD8 1548 aa21.56■■□□□ 1.04
LINC00339-208ENST00000634934 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
LINC00339-208ENST00000634934 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
LINC00339-208ENST00000634934 AGLP35573 1532 aa21.54■■□□□ 1.04
LINC00339-208ENST00000634934 RIMS1Q86UR5 1692 aaKnown RBP21.52■■□□□ 1.04
LINC00339-208ENST00000634934 FER1L4A9Z1Z3 1794 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms