RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
SMARCB1-208ENST00000634926 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
SMARCB1-208ENST00000634926 POTEEQ6S8J3 1075 aa8.54□□□□□ -1.04
SMARCB1-208ENST00000634926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
SMARCB1-208ENST00000634926 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
SMARCB1-208ENST00000634926 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
SMARCB1-208ENST00000634926 SOX12O15370 315 aa8.51□□□□□ -1.05
SMARCB1-208ENST00000634926 LSM11P83369 360 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMARCB1-208ENST00000634926 RIOK3O14730 519 aaKnown RBP8.48□□□□□ -1.05
SMARCB1-208ENST00000634926 FBXO22Q8NEZ5 403 aa8.48□□□□□ -1.05
SMARCB1-208ENST00000634926 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
SMARCB1-208ENST00000634926 PTGER2P43116 358 aa8.46□□□□□ -1.06
SMARCB1-208ENST00000634926 KIF3CO14782 793 aa8.45□□□□□ -1.06
SMARCB1-208ENST00000634926 NUDT7P0C024 238 aa8.45□□□□□ -1.06
SMARCB1-208ENST00000634926 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
SMARCB1-208ENST00000634926 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
SMARCB1-208ENST00000634926 LHX6Q9UPM6 363 aa8.42□□□□□ -1.06
SMARCB1-208ENST00000634926 VGFO15240 615 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-208ENST00000634926 MFRPQ9BY79 579 aa8.41□□□□□ -1.06
SMARCB1-208ENST00000634926 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
SMARCB1-208ENST00000634926 NLRP6P59044 892 aa8.38□□□□□ -1.07
SMARCB1-208ENST00000634926 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
SMARCB1-208ENST00000634926 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
SMARCB1-208ENST00000634926 PBX2P40425 430 aa8.35□□□□□ -1.07
SMARCB1-208ENST00000634926 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
SMARCB1-208ENST00000634926 SLC34A2O95436 690 aa8.33□□□□□ -1.08
SMARCB1-208ENST00000634926 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
SMARCB1-208ENST00000634926 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
SMARCB1-208ENST00000634926 STK24Q9Y6E0 443 aa8.32□□□□□ -1.08
SMARCB1-208ENST00000634926 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
SMARCB1-208ENST00000634926 HRO43593 1189 aa8.29□□□□□ -1.08
SMARCB1-208ENST00000634926 PPP1R37O75864 691 aa8.29□□□□□ -1.08
SMARCB1-208ENST00000634926 PSEN2P49810 448 aa8.29□□□□□ -1.08
SMARCB1-208ENST00000634926 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
SMARCB1-208ENST00000634926 STK25O00506 426 aa8.24□□□□□ -1.09
SMARCB1-208ENST00000634926 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
SMARCB1-208ENST00000634926 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-208ENST00000634926 TK2O00142 265 aa8.21□□□□□ -1.1
SMARCB1-208ENST00000634926 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
SMARCB1-208ENST00000634926 RGL2O15211 777 aa8.18□□□□□ -1.1
SMARCB1-208ENST00000634926 PSDA5PKW4 1024 aaPredicted RBP8.15□□□□□ -1.1
SMARCB1-208ENST00000634926 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
SMARCB1-208ENST00000634926 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
SMARCB1-208ENST00000634926 PTPN5P54829 565 aa8.13□□□□□ -1.11
SMARCB1-208ENST00000634926 FOXK1P85037 733 aa8.13□□□□□ -1.11
SMARCB1-208ENST00000634926 PKD2Q13563 968 aa8.13□□□□□ -1.11
SMARCB1-208ENST00000634926 DSG2Q14126 1118 aa8.13□□□□□ -1.11
SMARCB1-208ENST00000634926 VPS9D1Q9Y2B5 631 aa8.13□□□□□ -1.11
SMARCB1-208ENST00000634926 ECM2O94769 699 aaPredicted RBP8.12□□□□□ -1.11
SMARCB1-208ENST00000634926 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
SMARCB1-208ENST00000634926 PPP4R3BQ5MIZ7 849 aa8.11□□□□□ -1.11
SMARCB1-208ENST00000634926 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
SMARCB1-208ENST00000634926 BHMG1C9JSJ3 638 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-208ENST00000634926 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
SMARCB1-208ENST00000634926 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
SMARCB1-208ENST00000634926 OXER1Q8TDS5 423 aa8.05□□□□□ -1.12
SMARCB1-208ENST00000634926 A0A0G2JS52 829 aa8.04□□□□□ -1.12
SMARCB1-208ENST00000634926 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
SMARCB1-208ENST00000634926 UPF1Q92900 1129 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMARCB1-208ENST00000634926 STAC3Q96MF2 364 aa8.03□□□□□ -1.12
SMARCB1-208ENST00000634926 IRX2Q9BZI1 471 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-208ENST00000634926 ZBED2Q9BTP6 218 aa8.02□□□□□ -1.13
SMARCB1-208ENST00000634926 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
SMARCB1-208ENST00000634926 BCL2L12Q9HB09 334 aa8.02□□□□□ -1.13
SMARCB1-208ENST00000634926 RGS20O76081 388 aa8□□□□□ -1.13
SMARCB1-208ENST00000634926 FOSBP53539 338 aa8□□□□□ -1.13
SMARCB1-208ENST00000634926 TBC1D12O60347 775 aa7.99□□□□□ -1.13
SMARCB1-208ENST00000634926 WNT2BQ93097 391 aa7.98□□□□□ -1.13
SMARCB1-208ENST00000634926 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
SMARCB1-208ENST00000634926 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-208ENST00000634926 CRISPLD2Q9H0B8 497 aa7.95□□□□□ -1.14
SMARCB1-208ENST00000634926 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-208ENST00000634926 LCE2BO14633 110 aa7.94□□□□□ -1.14
SMARCB1-208ENST00000634926 MRPL50Q8N5N7 158 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-208ENST00000634926 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
SMARCB1-208ENST00000634926 PTPREP23469 700 aa7.93□□□□□ -1.14
SMARCB1-208ENST00000634926 HS6ST3Q8IZP7 471 aa7.92□□□□□ -1.14
SMARCB1-208ENST00000634926 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
SMARCB1-208ENST00000634926 GOLGA8CPA6NN73 597 aa7.91□□□□□ -1.14
SMARCB1-208ENST00000634926 PROX2Q3B8N5 592 aa7.91□□□□□ -1.14
SMARCB1-208ENST00000634926 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
SMARCB1-208ENST00000634926 JPH4Q96JJ6 628 aa7.9□□□□□ -1.14
SMARCB1-208ENST00000634926 ITGBL1O95965 494 aaPredicted RBP7.89□□□□□ -1.15
SMARCB1-208ENST00000634926 COL9A1P20849 921 aa7.89□□□□□ -1.15
SMARCB1-208ENST00000634926 BCAMP50895 628 aa7.89□□□□□ -1.15
SMARCB1-208ENST00000634926 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
SMARCB1-208ENST00000634926 EVI5O60447 810 aa7.88□□□□□ -1.15
SMARCB1-208ENST00000634926 Q6ZNB5 142 aa7.86□□□□□ -1.15
SMARCB1-208ENST00000634926 NBPF3Q9H094 633 aa7.85□□□□□ -1.15
SMARCB1-208ENST00000634926 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
SMARCB1-208ENST00000634926 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-208ENST00000634926 EMILIN3Q9NT22 766 aa7.84□□□□□ -1.15
SMARCB1-208ENST00000634926 WBP1LQ9NX94 342 aa7.83□□□□□ -1.16
SMARCB1-208ENST00000634926 RABGEF1Q9UJ41 708 aa7.83□□□□□ -1.16
SMARCB1-208ENST00000634926 SOWAHBA6NEL2 793 aa7.81□□□□□ -1.16
SMARCB1-208ENST00000634926 PPP1R3GB7ZBB8 358 aa7.81□□□□□ -1.16
SMARCB1-208ENST00000634926 ANKK1Q8NFD2 765 aa7.81□□□□□ -1.16
SMARCB1-208ENST00000634926 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
SMARCB1-208ENST00000634926 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
SMARCB1-208ENST00000634926 ZFRQ96KR1 1074 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms