RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-222ENST00000634403 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
SMARCA2-222ENST00000634403 SEC24BO95487 1268 aa9.7□□□□□ -0.86
SMARCA2-222ENST00000634403 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
SMARCA2-222ENST00000634403 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
SMARCA2-222ENST00000634403 SLC39A7Q92504 469 aa9.69□□□□□ -0.86
SMARCA2-222ENST00000634403 COLQQ9Y215 455 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-222ENST00000634403 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
SMARCA2-222ENST00000634403 G3V3G9 751 aa9.68□□□□□ -0.86
SMARCA2-222ENST00000634403 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-222ENST00000634403 TMEM121BQ9BXQ6 578 aaPredicted RBP9.67□□□□□ -0.86
SMARCA2-222ENST00000634403 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
SMARCA2-222ENST00000634403 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
SMARCA2-222ENST00000634403 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-222ENST00000634403 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
SMARCA2-222ENST00000634403 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
SMARCA2-222ENST00000634403 C7P10643 843 aa9.65□□□□□ -0.86
SMARCA2-222ENST00000634403 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.86
SMARCA2-222ENST00000634403 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-222ENST00000634403 L3MBTL3Q96JM7 780 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-222ENST00000634403 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
SMARCA2-222ENST00000634403 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
SMARCA2-222ENST00000634403 DSG2Q14126 1118 aa9.61□□□□□ -0.87
SMARCA2-222ENST00000634403 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
SMARCA2-222ENST00000634403 KIF3CO14782 793 aa9.58□□□□□ -0.88
SMARCA2-222ENST00000634403 FOXK1P85037 733 aa9.58□□□□□ -0.88
SMARCA2-222ENST00000634403 TMEM92Q6UXU6 159 aa9.58□□□□□ -0.88
SMARCA2-222ENST00000634403 ARIH1Q9Y4X5 557 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-222ENST00000634403 SEMA3EO15041 775 aa9.56□□□□□ -0.88
SMARCA2-222ENST00000634403 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
SMARCA2-222ENST00000634403 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
SMARCA2-222ENST00000634403 ABCC9O60706 1549 aa9.55□□□□□ -0.88
SMARCA2-222ENST00000634403 C3orf67Q6ZVT6 689 aa9.54□□□□□ -0.88
SMARCA2-222ENST00000634403 NACADO15069 1562 aa9.54□□□□□ -0.88
SMARCA2-222ENST00000634403 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
SMARCA2-222ENST00000634403 DPYSL4O14531 572 aa9.52□□□□□ -0.89
SMARCA2-222ENST00000634403 LMOD2Q6P5Q4 547 aa9.51□□□□□ -0.89
SMARCA2-222ENST00000634403 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
SMARCA2-222ENST00000634403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMARCA2-222ENST00000634403 PDIA6Q15084 440 aa9.46□□□□□ -0.9
SMARCA2-222ENST00000634403 UPF1Q92900 1129 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCA2-222ENST00000634403 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-222ENST00000634403 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
SMARCA2-222ENST00000634403 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
SMARCA2-222ENST00000634403 MAP3K9P80192 1104 aa9.43□□□□□ -0.9
SMARCA2-222ENST00000634403 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
SMARCA2-222ENST00000634403 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
SMARCA2-222ENST00000634403 SCRIBQ14160 1630 aa9.41□□□□□ -0.9
SMARCA2-222ENST00000634403 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
SMARCA2-222ENST00000634403 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
SMARCA2-222ENST00000634403 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
SMARCA2-222ENST00000634403 SUPT5HO00267 1087 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-222ENST00000634403 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-222ENST00000634403 ZC3H15Q8WU90 426 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-222ENST00000634403 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-222ENST00000634403 TBC1D12O60347 775 aa9.35□□□□□ -0.91
SMARCA2-222ENST00000634403 EVI5O60447 810 aa9.35□□□□□ -0.91
SMARCA2-222ENST00000634403 SLC34A2O95436 690 aa9.35□□□□□ -0.91
SMARCA2-222ENST00000634403 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
SMARCA2-222ENST00000634403 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-222ENST00000634403 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
SMARCA2-222ENST00000634403 SLAIN1Q8ND83 568 aa9.32□□□□□ -0.92
SMARCA2-222ENST00000634403 DDX12PQ92771 950 aa9.32□□□□□ -0.92
SMARCA2-222ENST00000634403 SCUBE2Q9NQ36 999 aa9.32□□□□□ -0.92
SMARCA2-222ENST00000634403 PTGER2P43116 358 aa9.3□□□□□ -0.92
SMARCA2-222ENST00000634403 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
SMARCA2-222ENST00000634403 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
SMARCA2-222ENST00000634403 ZMYND10O75800 440 aa9.27□□□□□ -0.93
SMARCA2-222ENST00000634403 OSBPP22059 807 aa9.27□□□□□ -0.93
SMARCA2-222ENST00000634403 HOXB3P14651 431 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-222ENST00000634403 DOK7Q18PE1 504 aa9.26□□□□□ -0.93
SMARCA2-222ENST00000634403 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-222ENST00000634403 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
SMARCA2-222ENST00000634403 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
SMARCA2-222ENST00000634403 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
SMARCA2-222ENST00000634403 GPR37O15354 613 aa9.24□□□□□ -0.93
SMARCA2-222ENST00000634403 BARGINQ6ZT62 677 aa9.24□□□□□ -0.93
SMARCA2-222ENST00000634403 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-222ENST00000634403 KDM4FA0A1W2PPD8 638 aa9.22□□□□□ -0.93
SMARCA2-222ENST00000634403 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMARCA2-222ENST00000634403 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
SMARCA2-222ENST00000634403 PHF14O94880 888 aa9.21□□□□□ -0.94
SMARCA2-222ENST00000634403 ARSIQ5FYB1 569 aa9.21□□□□□ -0.94
SMARCA2-222ENST00000634403 NUDT7P0C024 238 aa9.2□□□□□ -0.94
SMARCA2-222ENST00000634403 ZNF710Q8N1W2 664 aa9.19□□□□□ -0.94
SMARCA2-222ENST00000634403 EPAS1Q99814 870 aa9.19□□□□□ -0.94
SMARCA2-222ENST00000634403 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
SMARCA2-222ENST00000634403 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
SMARCA2-222ENST00000634403 UNC13AQ9UPW8 1703 aa9.19□□□□□ -0.94
SMARCA2-222ENST00000634403 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
SMARCA2-222ENST00000634403 GPR153Q6NV75 609 aa9.18□□□□□ -0.94
SMARCA2-222ENST00000634403 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
SMARCA2-222ENST00000634403 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
SMARCA2-222ENST00000634403 JPH4Q96JJ6 628 aa9.18□□□□□ -0.94
SMARCA2-222ENST00000634403 CECR2Q9BXF3 1484 aa9.17□□□□□ -0.94
SMARCA2-222ENST00000634403 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
SMARCA2-222ENST00000634403 CDHR5Q9HBB8 845 aa9.17□□□□□ -0.94
SMARCA2-222ENST00000634403 MAP3K7O43318 606 aa9.16□□□□□ -0.94
SMARCA2-222ENST00000634403 FCHSD2O94868 740 aa9.16□□□□□ -0.94
SMARCA2-222ENST00000634403 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
SMARCA2-222ENST00000634403 FOSBP53539 338 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms