RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
TRAPPC9-216ENST00000634178 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
TRAPPC9-216ENST00000634178 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
TRAPPC9-216ENST00000634178 TMEM121BQ9BXQ6 578 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC9-216ENST00000634178 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-216ENST00000634178 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
TRAPPC9-216ENST00000634178 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
TRAPPC9-216ENST00000634178 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
TRAPPC9-216ENST00000634178 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
TRAPPC9-216ENST00000634178 MARVELD3Q96A59 401 aa10.29□□□□□ -0.76
TRAPPC9-216ENST00000634178 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-216ENST00000634178 E2F4Q16254 413 aa10.28□□□□□ -0.76
TRAPPC9-216ENST00000634178 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
TRAPPC9-216ENST00000634178 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
TRAPPC9-216ENST00000634178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRAPPC9-216ENST00000634178 ERICH6Q7L0X2 663 aa10.26□□□□□ -0.77
TRAPPC9-216ENST00000634178 SNPHO15079 494 aa10.25□□□□□ -0.77
TRAPPC9-216ENST00000634178 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
TRAPPC9-216ENST00000634178 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
TRAPPC9-216ENST00000634178 PPP1R37O75864 691 aa10.24□□□□□ -0.77
TRAPPC9-216ENST00000634178 PDE4AP27815 886 aa10.23□□□□□ -0.77
TRAPPC9-216ENST00000634178 TMEM132AQ24JP5 1023 aa10.22□□□□□ -0.77
TRAPPC9-216ENST00000634178 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
TRAPPC9-216ENST00000634178 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
TRAPPC9-216ENST00000634178 SMYD5Q6GMV2 418 aa10.2□□□□□ -0.78
TRAPPC9-216ENST00000634178 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC9-216ENST00000634178 C3orf67Q6ZVT6 689 aa10.18□□□□□ -0.78
TRAPPC9-216ENST00000634178 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
TRAPPC9-216ENST00000634178 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
TRAPPC9-216ENST00000634178 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
TRAPPC9-216ENST00000634178 EMP3P54852 163 aa10.16□□□□□ -0.78
TRAPPC9-216ENST00000634178 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
TRAPPC9-216ENST00000634178 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
TRAPPC9-216ENST00000634178 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC9-216ENST00000634178 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-216ENST00000634178 MFSD10Q14728 455 aa10.14□□□□□ -0.79
TRAPPC9-216ENST00000634178 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
TRAPPC9-216ENST00000634178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.14□□□□□ -0.791e-6■■■□□ 17.1
TRAPPC9-216ENST00000634178 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
TRAPPC9-216ENST00000634178 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
TRAPPC9-216ENST00000634178 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-216ENST00000634178 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
TRAPPC9-216ENST00000634178 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
TRAPPC9-216ENST00000634178 SEMA3EO15041 775 aa10.1□□□□□ -0.79
TRAPPC9-216ENST00000634178 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-216ENST00000634178 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
TRAPPC9-216ENST00000634178 FAM205CA6NFA0 338 aa10.09□□□□□ -0.79
TRAPPC9-216ENST00000634178 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-216ENST00000634178 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
TRAPPC9-216ENST00000634178 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-216ENST00000634178 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
TRAPPC9-216ENST00000634178 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
TRAPPC9-216ENST00000634178 NEUROD2Q15784 382 aa10□□□□□ -0.81
TRAPPC9-216ENST00000634178 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-216ENST00000634178 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-216ENST00000634178 ZMYND10O75800 440 aa9.99□□□□□ -0.81
TRAPPC9-216ENST00000634178 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
TRAPPC9-216ENST00000634178 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-216ENST00000634178 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
TRAPPC9-216ENST00000634178 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-216ENST00000634178 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
TRAPPC9-216ENST00000634178 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
TRAPPC9-216ENST00000634178 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
TRAPPC9-216ENST00000634178 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
TRAPPC9-216ENST00000634178 G3V3G9 751 aa9.91□□□□□ -0.82
TRAPPC9-216ENST00000634178 TMEM92Q6UXU6 159 aa9.91□□□□□ -0.82
TRAPPC9-216ENST00000634178 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
TRAPPC9-216ENST00000634178 AK7Q96M32 723 aa9.91□□□□□ -0.82
TRAPPC9-216ENST00000634178 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
TRAPPC9-216ENST00000634178 FOXK1P85037 733 aa9.89□□□□□ -0.83
TRAPPC9-216ENST00000634178 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
TRAPPC9-216ENST00000634178 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
TRAPPC9-216ENST00000634178 ERBB3P21860 1342 aa9.87□□□□□ -0.83
TRAPPC9-216ENST00000634178 DSG2Q14126 1118 aa9.87□□□□□ -0.83
TRAPPC9-216ENST00000634178 PDIA6Q15084 440 aa9.87□□□□□ -0.83
TRAPPC9-216ENST00000634178 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-216ENST00000634178 DPYSL4O14531 572 aa9.86□□□□□ -0.83
TRAPPC9-216ENST00000634178 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-216ENST00000634178 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-216ENST00000634178 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-216ENST00000634178 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
TRAPPC9-216ENST00000634178 PLPP6Q8IY26 295 aa9.82□□□□□ -0.84
TRAPPC9-216ENST00000634178 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
TRAPPC9-216ENST00000634178 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
TRAPPC9-216ENST00000634178 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
TRAPPC9-216ENST00000634178 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
TRAPPC9-216ENST00000634178 ARXQ96QS3 562 aa9.79□□□□□ -0.84
TRAPPC9-216ENST00000634178 ZSWIM6Q9HCJ5 1215 aa9.79□□□□□ -0.84
TRAPPC9-216ENST00000634178 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
TRAPPC9-216ENST00000634178 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
TRAPPC9-216ENST00000634178 KIF3CO14782 793 aa9.75□□□□□ -0.85
TRAPPC9-216ENST00000634178 TRIM66O15016 1216 aa9.75□□□□□ -0.85
TRAPPC9-216ENST00000634178 MINK1Q8N4C8 1332 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-216ENST00000634178 TBC1D12O60347 775 aa9.74□□□□□ -0.85
TRAPPC9-216ENST00000634178 NUTM2FA1L443 756 aa9.73□□□□□ -0.85
TRAPPC9-216ENST00000634178 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
TRAPPC9-216ENST00000634178 PDE4DQ08499 809 aa9.73□□□□□ -0.85
TRAPPC9-216ENST00000634178 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
TRAPPC9-216ENST00000634178 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-216ENST00000634178 PTGER2P43116 358 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms