RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 PREX2Q70Z35 1606 aa30.41■■■□□ 2.46
CROCCP4-202ENST00000633627 EFCAB2Q5VUJ9 269 aa30.41■■■□□ 2.46
CROCCP4-202ENST00000633627 NCOA2Q15596 1464 aa30.41■■■□□ 2.46
CROCCP4-202ENST00000633627 CFAP74Q9C0B2 1584 aa30.4■■■□□ 2.46
CROCCP4-202ENST00000633627 AKNAQ7Z591 1439 aa30.39■■■□□ 2.46
CROCCP4-202ENST00000633627 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
CROCCP4-202ENST00000633627 ARHGAP5Q13017 1502 aa30.37■■■□□ 2.45
CROCCP4-202ENST00000633627 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
CROCCP4-202ENST00000633627 ADGRL1O94910 1474 aa30.29■■■□□ 2.44
CROCCP4-202ENST00000633627 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
CROCCP4-202ENST00000633627 SCAPERQ9BY12 1400 aa30.27■■■□□ 2.44
CROCCP4-202ENST00000633627 DENND4BO75064 1496 aaPredicted RBP30.26■■■□□ 2.44
CROCCP4-202ENST00000633627 RAPGEF3O95398 923 aa30.25■■■□□ 2.43
CROCCP4-202ENST00000633627 FRMPD1Q5SYB0 1578 aa30.23■■■□□ 2.43
CROCCP4-202ENST00000633627 SAMD9LQ8IVG5 1584 aa30.23■■■□□ 2.43
CROCCP4-202ENST00000633627 RICTORQ6R327 1708 aa30.22■■■□□ 2.43
CROCCP4-202ENST00000633627 ABCC1P33527 1531 aa30.22■■■□□ 2.43
CROCCP4-202ENST00000633627 ZNF777Q9ULD5 760 aaPredicted RBP30.21■■■□□ 2.43
CROCCP4-202ENST00000633627 ARHGEF12Q9NZN5 1544 aa30.2■■■□□ 2.42
CROCCP4-202ENST00000633627 MYOM3Q5VTT5 1437 aa30.19■■■□□ 2.42
CROCCP4-202ENST00000633627 POGZQ7Z3K3 1410 aa30.19■■■□□ 2.42
CROCCP4-202ENST00000633627 ZNF644Q9H582 1327 aaPredicted RBP30.17■■■□□ 2.42
CROCCP4-202ENST00000633627 KIAA1107Q9UPP5 1409 aa30.16■■■□□ 2.42
CROCCP4-202ENST00000633627 PLEKHH2Q8IVE3 1493 aa30.16■■■□□ 2.42
CROCCP4-202ENST00000633627 MIA2Q96PC5 1412 aa30.13■■■□□ 2.41
CROCCP4-202ENST00000633627 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
CROCCP4-202ENST00000633627 ZNF518AQ6AHZ1 1483 aa30.12■■■□□ 2.41
CROCCP4-202ENST00000633627 ZMYM4Q5VZL5 1548 aa30.12■■■□□ 2.41
CROCCP4-202ENST00000633627 SYCP2Q9BX26 1530 aa30.12■■■□□ 2.41
CROCCP4-202ENST00000633627 AFAP1Q8N556 730 aa30.11■■■□□ 2.41
CROCCP4-202ENST00000633627 HNRNPMP52272 730 aaKnown RBP eCLIP30.1■■■□□ 2.41
CROCCP4-202ENST00000633627 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
CROCCP4-202ENST00000633627 CAMSAP2Q08AD1 1489 aa30.09■■■□□ 2.41
CROCCP4-202ENST00000633627 KDM5CP41229 1560 aa30.08■■■□□ 2.41
CROCCP4-202ENST00000633627 MBD5Q9P267 1494 aa30.07■■■□□ 2.4
CROCCP4-202ENST00000633627 MAGI2Q86UL8 1455 aa30.05■■■□□ 2.4
CROCCP4-202ENST00000633627 FGD6Q6ZV73 1430 aa30.05■■■□□ 2.4
CROCCP4-202ENST00000633627 MLH3Q9UHC1 1453 aa30■■■□□ 2.39
CROCCP4-202ENST00000633627 YEATS2Q9ULM3 1422 aa29.99■■■□□ 2.39
CROCCP4-202ENST00000633627 PTPN23Q9H3S7 1636 aa29.99■■■□□ 2.39
CROCCP4-202ENST00000633627 TCOF1Q13428 1488 aaKnown RBP29.98■■■□□ 2.39
CROCCP4-202ENST00000633627 ZFYVE16Q7Z3T8 1539 aa29.97■■■□□ 2.39
CROCCP4-202ENST00000633627 ARHGEF40Q8TER5 1519 aa29.97■■■□□ 2.39
CROCCP4-202ENST00000633627 RSPH4AQ5TD94 716 aa29.97■■■□□ 2.39
CROCCP4-202ENST00000633627 ARHGEF5Q12774 1597 aa29.97■■■□□ 2.39
CROCCP4-202ENST00000633627 HECW2Q9P2P5 1572 aa29.97■■■□□ 2.39
CROCCP4-202ENST00000633627 CCDC141Q6ZP82 1450 aa29.94■■■□□ 2.38
CROCCP4-202ENST00000633627 SPAG9O60271 1321 aaKnown RBP29.94■■■□□ 2.38
CROCCP4-202ENST00000633627 KIDINS220Q9ULH0 1771 aa29.92■■■□□ 2.38
CROCCP4-202ENST00000633627 INO80Q9ULG1 1556 aaPredicted RBP29.89■■■□□ 2.38
CROCCP4-202ENST00000633627 ATP10AO60312 1499 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 ATP7AQ04656 1500 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 DIP2CQ9Y2E4 1556 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 ABCA6Q8N139 1617 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 MYT1LQ9UL68 1186 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 RTEL1-TNFRSF6BF6WH68 1400 aa29.87■■■□□ 2.37
CROCCP4-202ENST00000633627 ABCC5O15440 1437 aa29.84■■■□□ 2.37
CROCCP4-202ENST00000633627 TSPY4P0CV99 314 aa29.83■■■□□ 2.37
CROCCP4-202ENST00000633627 TSPY10P0CW01 314 aa29.83■■■□□ 2.37
CROCCP4-202ENST00000633627 C9orf84Q5VXU9 1444 aa29.82■■■□□ 2.36
CROCCP4-202ENST00000633627 FAM50AQ14320 339 aaKnown RBP29.82■■■□□ 2.36
CROCCP4-202ENST00000633627 DNMT1P26358 1616 aaKnown RBP29.82■■■□□ 2.36
CROCCP4-202ENST00000633627 REREQ9P2R6 1566 aa29.8■■■□□ 2.36
CROCCP4-202ENST00000633627 MAST1Q9Y2H9 1570 aa29.8■■■□□ 2.36
CROCCP4-202ENST00000633627 DAPK1P53355 1430 aa29.79■■■□□ 2.36
CROCCP4-202ENST00000633627 SIGLEC1Q9BZZ2 1709 aa29.79■■■□□ 2.36
CROCCP4-202ENST00000633627 RRBP1Q9P2E9 1410 aaKnown RBP29.79■■■□□ 2.36
CROCCP4-202ENST00000633627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.78■■■□□ 2.36
CROCCP4-202ENST00000633627 CROCC2H7BZ55 1655 aa29.76■■■□□ 2.36
CROCCP4-202ENST00000633627 SHANK2Q9UPX8 1470 aa29.76■■■□□ 2.35
CROCCP4-202ENST00000633627 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
CROCCP4-202ENST00000633627 A2MP01023 1474 aa29.71■■■□□ 2.35
CROCCP4-202ENST00000633627 ADGBQ8N7X0 1667 aa29.71■■■□□ 2.35
CROCCP4-202ENST00000633627 AGLP35573 1532 aa29.71■■■□□ 2.35
CROCCP4-202ENST00000633627 KDM4FA0A1W2PPD8 638 aa29.7■■■□□ 2.35
CROCCP4-202ENST00000633627 PLXNC1O60486 1568 aa29.69■■■□□ 2.34
CROCCP4-202ENST00000633627 DHX29Q7Z478 1369 aaKnown RBP29.67■■■□□ 2.34
CROCCP4-202ENST00000633627 BCORL1Q5H9F3 1711 aa29.67■■■□□ 2.34
CROCCP4-202ENST00000633627 PTPRKQ15262 1439 aa29.66■■■□□ 2.34
CROCCP4-202ENST00000633627 CHIC2Q9UKJ5 165 aa29.64■■■□□ 2.34
CROCCP4-202ENST00000633627 ADGRL2O95490 1459 aa29.62■■■□□ 2.33
CROCCP4-202ENST00000633627 ADAMTSL3P82987 1691 aa29.62■■■□□ 2.33
CROCCP4-202ENST00000633627 NCOA1Q15788 1441 aa29.62■■■□□ 2.33
CROCCP4-202ENST00000633627 ANKRD30AQ9BXX3 1397 aa29.6■■■□□ 2.33
CROCCP4-202ENST00000633627 KIF15Q9NS87 1388 aa29.59■■■□□ 2.33
CROCCP4-202ENST00000633627 MLECQ14165 292 aa29.58■■■□□ 2.33
CROCCP4-202ENST00000633627 RRP7BPQ9NSQ0 103 aa29.57■■■□□ 2.32
CROCCP4-202ENST00000633627 DUOX2Q9NRD8 1548 aa29.56■■■□□ 2.32
CROCCP4-202ENST00000633627 ITGAEP38570 1179 aa29.55■■■□□ 2.32
CROCCP4-202ENST00000633627 ROCK1Q13464 1354 aa29.53■■■□□ 2.32
CROCCP4-202ENST00000633627 MADDQ8WXG6 1647 aa29.53■■■□□ 2.32
CROCCP4-202ENST00000633627 KIF3BO15066 747 aa29.51■■■□□ 2.31
CROCCP4-202ENST00000633627 ERBINQ96RT1 1412 aa29.48■■■□□ 2.31
CROCCP4-202ENST00000633627 EIF2AK4Q9P2K8 1649 aaKnown RBP29.48■■■□□ 2.31
CROCCP4-202ENST00000633627 GGT6Q6P531 493 aa29.46■■■□□ 2.31
CROCCP4-202ENST00000633627 FER1L4A9Z1Z3 1794 aa29.46■■■□□ 2.31
CROCCP4-202ENST00000633627 PPP6R1Q9UPN7 881 aa29.43■■■□□ 2.3
CROCCP4-202ENST00000633627 RIMS1Q86UR5 1692 aaKnown RBP29.43■■■□□ 2.3
CROCCP4-202ENST00000633627 RNF17Q9BXT8 1623 aaKnown RBP29.42■■■□□ 2.3
CROCCP4-202ENST00000633627 PTPRMP28827 1452 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms