RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
GPCPD1-207ENST00000633552 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
GPCPD1-207ENST00000633552 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
GPCPD1-207ENST00000633552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.76
GPCPD1-207ENST00000633552 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
GPCPD1-207ENST00000633552 NBR1Q14596 966 aa10.26□□□□□ -0.77
GPCPD1-207ENST00000633552 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
GPCPD1-207ENST00000633552 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
GPCPD1-207ENST00000633552 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
GPCPD1-207ENST00000633552 G3V3G9 751 aa10.19□□□□□ -0.78
GPCPD1-207ENST00000633552 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
GPCPD1-207ENST00000633552 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
GPCPD1-207ENST00000633552 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
GPCPD1-207ENST00000633552 MMRN1Q13201 1228 aa10.14□□□□□ -0.79
GPCPD1-207ENST00000633552 DPY19L2Q6NUT2 758 aa10.14□□□□□ -0.79
GPCPD1-207ENST00000633552 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
GPCPD1-207ENST00000633552 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
GPCPD1-207ENST00000633552 PDE4AP27815 886 aa10.12□□□□□ -0.79
GPCPD1-207ENST00000633552 PDCD7Q8N8D1 485 aaKnown RBP10.12□□□□□ -0.79
GPCPD1-207ENST00000633552 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
GPCPD1-207ENST00000633552 MARVELD3Q96A59 401 aa10.11□□□□□ -0.79
GPCPD1-207ENST00000633552 NCKAP5LQ9HCH0 1330 aa10.1□□□□□ -0.79
GPCPD1-207ENST00000633552 ILDR1Q86SU0 546 aaPredicted RBP10.1□□□□□ -0.79
GPCPD1-207ENST00000633552 MICALL2Q8IY33 904 aa10.1□□□□□ -0.79
GPCPD1-207ENST00000633552 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
GPCPD1-207ENST00000633552 E2F4Q16254 413 aa10.08□□□□□ -0.8
GPCPD1-207ENST00000633552 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
GPCPD1-207ENST00000633552 EMP3P54852 163 aa10.07□□□□□ -0.8
GPCPD1-207ENST00000633552 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
GPCPD1-207ENST00000633552 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
GPCPD1-207ENST00000633552 MFSD10Q14728 455 aa10.02□□□□□ -0.81
GPCPD1-207ENST00000633552 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
GPCPD1-207ENST00000633552 PPP1R15BQ5SWA1 713 aa10.02□□□□□ -0.81
GPCPD1-207ENST00000633552 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
GPCPD1-207ENST00000633552 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
GPCPD1-207ENST00000633552 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
GPCPD1-207ENST00000633552 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
GPCPD1-207ENST00000633552 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
GPCPD1-207ENST00000633552 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
GPCPD1-207ENST00000633552 DSG2Q14126 1118 aa9.96□□□□□ -0.82
GPCPD1-207ENST00000633552 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
GPCPD1-207ENST00000633552 FOXK1P85037 733 aa9.92□□□□□ -0.82
GPCPD1-207ENST00000633552 PLPP6Q8IY26 295 aa9.92□□□□□ -0.82
GPCPD1-207ENST00000633552 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
GPCPD1-207ENST00000633552 SEMA3EO15041 775 aa9.9□□□□□ -0.82
GPCPD1-207ENST00000633552 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
GPCPD1-207ENST00000633552 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
GPCPD1-207ENST00000633552 KRTAP3-2Q9BYR7 98 aa9.9□□□□□ -0.82
GPCPD1-207ENST00000633552 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
GPCPD1-207ENST00000633552 DPYSL4O14531 572 aa9.88□□□□□ -0.83
GPCPD1-207ENST00000633552 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
GPCPD1-207ENST00000633552 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
GPCPD1-207ENST00000633552 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
GPCPD1-207ENST00000633552 KIF3CO14782 793 aa9.86□□□□□ -0.83
GPCPD1-207ENST00000633552 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
GPCPD1-207ENST00000633552 TMEM92Q6UXU6 159 aa9.86□□□□□ -0.83
GPCPD1-207ENST00000633552 RIMBP2O15034 1052 aa9.85□□□□□ -0.83
GPCPD1-207ENST00000633552 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
GPCPD1-207ENST00000633552 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
GPCPD1-207ENST00000633552 MAP3K9P80192 1104 aa9.84□□□□□ -0.83
GPCPD1-207ENST00000633552 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
GPCPD1-207ENST00000633552 ERBB3P21860 1342 aa9.83□□□□□ -0.84
GPCPD1-207ENST00000633552 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
GPCPD1-207ENST00000633552 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
GPCPD1-207ENST00000633552 ARIH1Q9Y4X5 557 aaPredicted RBP9.82□□□□□ -0.84
GPCPD1-207ENST00000633552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
GPCPD1-207ENST00000633552 ZNF316A6NFI3 1004 aaPredicted RBP9.79□□□□□ -0.84
GPCPD1-207ENST00000633552 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
GPCPD1-207ENST00000633552 PDIA6Q15084 440 aa9.78□□□□□ -0.84
GPCPD1-207ENST00000633552 MLLT3P42568 568 aaPredicted RBP9.77□□□□□ -0.85
GPCPD1-207ENST00000633552 TBC1D12O60347 775 aa9.76□□□□□ -0.85
GPCPD1-207ENST00000633552 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
GPCPD1-207ENST00000633552 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
GPCPD1-207ENST00000633552 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
GPCPD1-207ENST00000633552 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
GPCPD1-207ENST00000633552 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
GPCPD1-207ENST00000633552 EVI5O60447 810 aa9.71□□□□□ -0.86
GPCPD1-207ENST00000633552 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
GPCPD1-207ENST00000633552 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
GPCPD1-207ENST00000633552 DDX12PQ92771 950 aa9.7□□□□□ -0.86
GPCPD1-207ENST00000633552 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
GPCPD1-207ENST00000633552 PTGER2P43116 358 aa9.69□□□□□ -0.86
GPCPD1-207ENST00000633552 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
GPCPD1-207ENST00000633552 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
GPCPD1-207ENST00000633552 PTCD2Q8WV60 388 aaKnown RBP9.68□□□□□ -0.86
GPCPD1-207ENST00000633552 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
GPCPD1-207ENST00000633552 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
GPCPD1-207ENST00000633552 SLC34A2O95436 690 aa9.65□□□□□ -0.86
GPCPD1-207ENST00000633552 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
GPCPD1-207ENST00000633552 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
GPCPD1-207ENST00000633552 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
GPCPD1-207ENST00000633552 NUDT7P0C024 238 aa9.58□□□□□ -0.88
GPCPD1-207ENST00000633552 OSBPP22059 807 aa9.58□□□□□ -0.88
GPCPD1-207ENST00000633552 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
GPCPD1-207ENST00000633552 MAP3K7O43318 606 aa9.57□□□□□ -0.88
GPCPD1-207ENST00000633552 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
GPCPD1-207ENST00000633552 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.882e-7■■□□□ 13.4
GPCPD1-207ENST00000633552 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
GPCPD1-207ENST00000633552 ZMYND10O75800 440 aa9.56□□□□□ -0.88
GPCPD1-207ENST00000633552 PHF14O94880 888 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms