RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
LIMS4-205ENST00000633364 MYT1LQ9UL68 1186 aa24.74■■□□□ 1.55
LIMS4-205ENST00000633364 POGZQ7Z3K3 1410 aa24.73■■□□□ 1.55
LIMS4-205ENST00000633364 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
LIMS4-205ENST00000633364 ARHGEF40Q8TER5 1519 aa24.71■■□□□ 1.55
LIMS4-205ENST00000633364 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.55
LIMS4-205ENST00000633364 ZMYM4Q5VZL5 1548 aa24.7■■□□□ 1.54
LIMS4-205ENST00000633364 ZFYVE16Q7Z3T8 1539 aa24.7■■□□□ 1.54
LIMS4-205ENST00000633364 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
LIMS4-205ENST00000633364 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
LIMS4-205ENST00000633364 PREX2Q70Z35 1606 aa24.67■■□□□ 1.54
LIMS4-205ENST00000633364 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
LIMS4-205ENST00000633364 YEATS2Q9ULM3 1422 aa24.66■■□□□ 1.54
LIMS4-205ENST00000633364 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
LIMS4-205ENST00000633364 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
LIMS4-205ENST00000633364 CDC42BPAQ5VT25 1732 aa24.62■■□□□ 1.53
LIMS4-205ENST00000633364 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
LIMS4-205ENST00000633364 BCORL1Q5H9F3 1711 aa24.61■■□□□ 1.53
LIMS4-205ENST00000633364 MLECQ14165 292 aa24.59■■□□□ 1.53
LIMS4-205ENST00000633364 GPATCH8Q9UKJ3 1502 aaKnown RBP24.59■■□□□ 1.53
LIMS4-205ENST00000633364 ADAMTSL3P82987 1691 aa24.59■■□□□ 1.53
LIMS4-205ENST00000633364 ATP10AO60312 1499 aa24.58■■□□□ 1.53
LIMS4-205ENST00000633364 EHBP1L1Q8N3D4 1523 aa24.58■■□□□ 1.53
LIMS4-205ENST00000633364 ABCC1P33527 1531 aa24.57■■□□□ 1.52
LIMS4-205ENST00000633364 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
LIMS4-205ENST00000633364 C9orf84Q5VXU9 1444 aa24.55■■□□□ 1.52
LIMS4-205ENST00000633364 PTPRMP28827 1452 aa24.55■■□□□ 1.52
LIMS4-205ENST00000633364 KDM5CP41229 1560 aa24.54■■□□□ 1.52
LIMS4-205ENST00000633364 TRAPPC8Q9Y2L5 1435 aa24.54■■□□□ 1.52
LIMS4-205ENST00000633364 MADDQ8WXG6 1647 aa24.53■■□□□ 1.52
LIMS4-205ENST00000633364 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
LIMS4-205ENST00000633364 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
LIMS4-205ENST00000633364 ARHGEF12Q9NZN5 1544 aa24.52■■□□□ 1.52
LIMS4-205ENST00000633364 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.52
LIMS4-205ENST00000633364 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
LIMS4-205ENST00000633364 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
LIMS4-205ENST00000633364 MLH3Q9UHC1 1453 aa24.5■■□□□ 1.51
LIMS4-205ENST00000633364 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
LIMS4-205ENST00000633364 RIMS1Q86UR5 1692 aaKnown RBP24.48■■□□□ 1.51
LIMS4-205ENST00000633364 SYCP2Q9BX26 1530 aa24.48■■□□□ 1.51
LIMS4-205ENST00000633364 TIAM1Q13009 1591 aa24.47■■□□□ 1.51
LIMS4-205ENST00000633364 SPAG9O60271 1321 aaKnown RBP24.47■■□□□ 1.51
LIMS4-205ENST00000633364 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
LIMS4-205ENST00000633364 SUPT6HQ7KZ85 1726 aaKnown RBP24.46■■□□□ 1.51
LIMS4-205ENST00000633364 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
LIMS4-205ENST00000633364 APLP2Q06481 763 aa24.45■■□□□ 1.5
LIMS4-205ENST00000633364 DIP2CQ9Y2E4 1556 aa24.45■■□□□ 1.5
LIMS4-205ENST00000633364 NCOA2Q15596 1464 aa24.43■■□□□ 1.5
LIMS4-205ENST00000633364 ABCA6Q8N139 1617 aa24.42■■□□□ 1.5
LIMS4-205ENST00000633364 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
LIMS4-205ENST00000633364 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
LIMS4-205ENST00000633364 FER1L4A9Z1Z3 1794 aa24.4■■□□□ 1.5
LIMS4-205ENST00000633364 LRRC9Q6ZRR7 1453 aa24.39■■□□□ 1.5
LIMS4-205ENST00000633364 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
LIMS4-205ENST00000633364 REREQ9P2R6 1566 aa24.37■■□□□ 1.49
LIMS4-205ENST00000633364 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
LIMS4-205ENST00000633364 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
LIMS4-205ENST00000633364 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
LIMS4-205ENST00000633364 AGLP35573 1532 aa24.32■■□□□ 1.48
LIMS4-205ENST00000633364 RSPH4AQ5TD94 716 aa24.3■■□□□ 1.48
LIMS4-205ENST00000633364 CAMSAP2Q08AD1 1489 aa24.3■■□□□ 1.48
LIMS4-205ENST00000633364 CEBPAP49715 358 aaPredicted RBP24.29■■□□□ 1.48
LIMS4-205ENST00000633364 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
LIMS4-205ENST00000633364 INO80Q9ULG1 1556 aaPredicted RBP24.28■■□□□ 1.48
LIMS4-205ENST00000633364 A2MP01023 1474 aa24.26■■□□□ 1.47
LIMS4-205ENST00000633364 TSPY4P0CV99 314 aa24.26■■□□□ 1.47
LIMS4-205ENST00000633364 TSPY10P0CW01 314 aa24.26■■□□□ 1.47
LIMS4-205ENST00000633364 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
LIMS4-205ENST00000633364 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
LIMS4-205ENST00000633364 LMTK3Q96Q04 1460 aa24.23■■□□□ 1.47
LIMS4-205ENST00000633364 GGT6Q6P531 493 aa24.22■■□□□ 1.47
LIMS4-205ENST00000633364 CNTLNQ9NXG0 1405 aa24.21■■□□□ 1.47
LIMS4-205ENST00000633364 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
LIMS4-205ENST00000633364 MYOM3Q5VTT5 1437 aa24.2■■□□□ 1.46
LIMS4-205ENST00000633364 HSPA2P54652 639 aa24.19■■□□□ 1.46
LIMS4-205ENST00000633364 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
LIMS4-205ENST00000633364 PLXNC1O60486 1568 aa24.16■■□□□ 1.46
LIMS4-205ENST00000633364 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
LIMS4-205ENST00000633364 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
LIMS4-205ENST00000633364 C3P01024 1663 aa24.14■■□□□ 1.45
LIMS4-205ENST00000633364 PREX1Q8TCU6 1659 aa24.13■■□□□ 1.45
LIMS4-205ENST00000633364 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
LIMS4-205ENST00000633364 KIF3BO15066 747 aa24.12■■□□□ 1.45
LIMS4-205ENST00000633364 SETD1BQ9UPS6 1966 aaKnown RBP24.11■■□□□ 1.45
LIMS4-205ENST00000633364 PPP6R1Q9UPN7 881 aa24.11■■□□□ 1.45
LIMS4-205ENST00000633364 ZMYM3Q14202 1370 aa24.11■■□□□ 1.45
LIMS4-205ENST00000633364 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.44
LIMS4-205ENST00000633364 MROH2AA6NES4 1674 aa24.07■■□□□ 1.44
LIMS4-205ENST00000633364 PTPN23Q9H3S7 1636 aa24.04■■□□□ 1.44
LIMS4-205ENST00000633364 FGD6Q6ZV73 1430 aa24.03■■□□□ 1.44
LIMS4-205ENST00000633364 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
LIMS4-205ENST00000633364 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
LIMS4-205ENST00000633364 NPATQ14207 1427 aa24.01■■□□□ 1.43
LIMS4-205ENST00000633364 DMRT2Q9Y5R5 561 aa23.98■■□□□ 1.43
LIMS4-205ENST00000633364 FAM50AQ14320 339 aaKnown RBP23.97■■□□□ 1.43
LIMS4-205ENST00000633364 ABCC5O15440 1437 aa23.96■■□□□ 1.43
LIMS4-205ENST00000633364 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
LIMS4-205ENST00000633364 TCOF1Q13428 1488 aaKnown RBP23.95■■□□□ 1.42
LIMS4-205ENST00000633364 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
LIMS4-205ENST00000633364 DAPK1P53355 1430 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms