RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 ITSN2Q9NZM3 1697 aa30■■■□□ 2.39
SKIDA1-204ENST00000633225 NEO1Q92859 1461 aa30■■■□□ 2.39
SKIDA1-204ENST00000633225 PPARGC1BQ86YN6 1023 aaKnown RBP29.99■■■□□ 2.39
SKIDA1-204ENST00000633225 CFAP74Q9C0B2 1584 aa29.98■■■□□ 2.39
SKIDA1-204ENST00000633225 PHLDB1Q86UU1 1377 aa29.98■■■□□ 2.39
SKIDA1-204ENST00000633225 COL17A1Q9UMD9 1497 aaPredicted RBP29.94■■■□□ 2.38
SKIDA1-204ENST00000633225 AKNAQ7Z591 1439 aa29.94■■■□□ 2.38
SKIDA1-204ENST00000633225 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
SKIDA1-204ENST00000633225 SAMD9LQ8IVG5 1584 aa29.93■■■□□ 2.38
SKIDA1-204ENST00000633225 EFCAB2Q5VUJ9 269 aa29.92■■■□□ 2.38
SKIDA1-204ENST00000633225 KDM6BO15054 1643 aa29.9■■■□□ 2.38
SKIDA1-204ENST00000633225 CFDP1Q9UEE9 299 aaPredicted RBP29.89■■■□□ 2.38
SKIDA1-204ENST00000633225 ABCC1P33527 1531 aa29.88■■■□□ 2.37
SKIDA1-204ENST00000633225 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
SKIDA1-204ENST00000633225 ARHGEF12Q9NZN5 1544 aa29.85■■■□□ 2.37
SKIDA1-204ENST00000633225 FRMPD1Q5SYB0 1578 aa29.84■■■□□ 2.37
SKIDA1-204ENST00000633225 MIA2Q96PC5 1412 aa29.83■■■□□ 2.37
SKIDA1-204ENST00000633225 ZNF644Q9H582 1327 aaPredicted RBP29.83■■■□□ 2.37
SKIDA1-204ENST00000633225 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
SKIDA1-204ENST00000633225 FGD6Q6ZV73 1430 aa29.82■■■□□ 2.36
SKIDA1-204ENST00000633225 SCAPERQ9BY12 1400 aa29.82■■■□□ 2.36
SKIDA1-204ENST00000633225 CAMSAP2Q08AD1 1489 aa29.81■■■□□ 2.36
SKIDA1-204ENST00000633225 SYCP2Q9BX26 1530 aa29.81■■■□□ 2.36
SKIDA1-204ENST00000633225 RICTORQ6R327 1708 aa29.81■■■□□ 2.36
SKIDA1-204ENST00000633225 DENND4BO75064 1496 aaPredicted RBP29.79■■■□□ 2.36
SKIDA1-204ENST00000633225 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
SKIDA1-204ENST00000633225 POGZQ7Z3K3 1410 aa29.78■■■□□ 2.36
SKIDA1-204ENST00000633225 KIAA1107Q9UPP5 1409 aa29.77■■■□□ 2.36
SKIDA1-204ENST00000633225 RAPGEF3O95398 923 aa29.76■■■□□ 2.35
SKIDA1-204ENST00000633225 PLEKHH2Q8IVE3 1493 aa29.76■■■□□ 2.35
SKIDA1-204ENST00000633225 TRAPPC8Q9Y2L5 1435 aa29.75■■■□□ 2.35
SKIDA1-204ENST00000633225 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
SKIDA1-204ENST00000633225 MBD5Q9P267 1494 aa29.74■■■□□ 2.35
SKIDA1-204ENST00000633225 HNRNPMP52272 730 aaKnown RBP eCLIP29.71■■■□□ 2.35
SKIDA1-204ENST00000633225 KDM5CP41229 1560 aa29.7■■■□□ 2.35
SKIDA1-204ENST00000633225 ZNF518AQ6AHZ1 1483 aa29.7■■■□□ 2.35
SKIDA1-204ENST00000633225 ZMYM4Q5VZL5 1548 aa29.69■■■□□ 2.34
SKIDA1-204ENST00000633225 AFAP1Q8N556 730 aa29.67■■■□□ 2.34
SKIDA1-204ENST00000633225 ARHGEF5Q12774 1597 aa29.66■■■□□ 2.34
SKIDA1-204ENST00000633225 RRBP1Q9P2E9 1410 aaKnown RBP29.64■■■□□ 2.33
SKIDA1-204ENST00000633225 CCDC141Q6ZP82 1450 aa29.63■■■□□ 2.33
SKIDA1-204ENST00000633225 HECW2Q9P2P5 1572 aa29.6■■■□□ 2.33
SKIDA1-204ENST00000633225 DNMT1P26358 1616 aaKnown RBP29.59■■■□□ 2.33
SKIDA1-204ENST00000633225 INO80Q9ULG1 1556 aaPredicted RBP29.57■■■□□ 2.32
SKIDA1-204ENST00000633225 CROCC2H7BZ55 1655 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 FAM50AQ14320 339 aaKnown RBP29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 KIDINS220Q9ULH0 1771 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 ABCC5O15440 1437 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 YEATS2Q9ULM3 1422 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 MLH3Q9UHC1 1453 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 ZFYVE16Q7Z3T8 1539 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 ARHGEF40Q8TER5 1519 aa29.56■■■□□ 2.32
SKIDA1-204ENST00000633225 DAPK1P53355 1430 aa29.54■■■□□ 2.32
SKIDA1-204ENST00000633225 MAGI2Q86UL8 1455 aa29.54■■■□□ 2.32
SKIDA1-204ENST00000633225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.53■■■□□ 2.32
SKIDA1-204ENST00000633225 ATP7AQ04656 1500 aa29.52■■■□□ 2.32
SKIDA1-204ENST00000633225 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
SKIDA1-204ENST00000633225 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
SKIDA1-204ENST00000633225 MAST1Q9Y2H9 1570 aa29.51■■■□□ 2.31
SKIDA1-204ENST00000633225 SPAG9O60271 1321 aaKnown RBP29.5■■■□□ 2.31
SKIDA1-204ENST00000633225 DIP2CQ9Y2E4 1556 aa29.49■■■□□ 2.31
SKIDA1-204ENST00000633225 SHANK2Q9UPX8 1470 aa29.48■■■□□ 2.31
SKIDA1-204ENST00000633225 RTEL1-TNFRSF6BF6WH68 1400 aa29.47■■■□□ 2.31
SKIDA1-204ENST00000633225 C9orf84Q5VXU9 1444 aa29.47■■■□□ 2.31
SKIDA1-204ENST00000633225 PTPRKQ15262 1439 aa29.46■■■□□ 2.31
SKIDA1-204ENST00000633225 SIGLEC1Q9BZZ2 1709 aa29.43■■■□□ 2.3
SKIDA1-204ENST00000633225 TSPY4P0CV99 314 aa29.42■■■□□ 2.3
SKIDA1-204ENST00000633225 TSPY10P0CW01 314 aa29.42■■■□□ 2.3
SKIDA1-204ENST00000633225 ADGBQ8N7X0 1667 aa29.41■■■□□ 2.3
SKIDA1-204ENST00000633225 MYT1LQ9UL68 1186 aa29.4■■■□□ 2.3
SKIDA1-204ENST00000633225 PLXNC1O60486 1568 aa29.4■■■□□ 2.3
SKIDA1-204ENST00000633225 ATP10AO60312 1499 aa29.39■■■□□ 2.3
SKIDA1-204ENST00000633225 REREQ9P2R6 1566 aa29.37■■■□□ 2.29
SKIDA1-204ENST00000633225 ADGRL2O95490 1459 aa29.36■■■□□ 2.29
SKIDA1-204ENST00000633225 CHIC2Q9UKJ5 165 aa29.35■■■□□ 2.29
SKIDA1-204ENST00000633225 ITGAEP38570 1179 aa29.34■■■□□ 2.29
SKIDA1-204ENST00000633225 A2MP01023 1474 aa29.31■■■□□ 2.28
SKIDA1-204ENST00000633225 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
SKIDA1-204ENST00000633225 ANKRD30AQ9BXX3 1397 aa29.27■■■□□ 2.28
SKIDA1-204ENST00000633225 KIF15Q9NS87 1388 aa29.27■■■□□ 2.28
SKIDA1-204ENST00000633225 ROCK1Q13464 1354 aa29.26■■■□□ 2.27
SKIDA1-204ENST00000633225 RRP7BPQ9NSQ0 103 aa29.25■■■□□ 2.27
SKIDA1-204ENST00000633225 DHX29Q7Z478 1369 aaKnown RBP29.25■■■□□ 2.27
SKIDA1-204ENST00000633225 AGLP35573 1532 aa29.25■■■□□ 2.27
SKIDA1-204ENST00000633225 DUOX2Q9NRD8 1548 aa29.24■■■□□ 2.27
SKIDA1-204ENST00000633225 BCORL1Q5H9F3 1711 aa29.19■■■□□ 2.26
SKIDA1-204ENST00000633225 ERBINQ96RT1 1412 aa29.17■■■□□ 2.26
SKIDA1-204ENST00000633225 EIF2AK4Q9P2K8 1649 aaKnown RBP29.16■■■□□ 2.26
SKIDA1-204ENST00000633225 ARID4BQ4LE39 1312 aaPredicted RBP29.15■■■□□ 2.26
SKIDA1-204ENST00000633225 GCC2Q8IWJ2 1684 aa29.14■■■□□ 2.25
SKIDA1-204ENST00000633225 ANKRD50Q9ULJ7 1429 aa29.12■■■□□ 2.25
SKIDA1-204ENST00000633225 NAIPQ13075 1403 aa29.11■■■□□ 2.25
SKIDA1-204ENST00000633225 ADAMTSL3P82987 1691 aa29.11■■■□□ 2.25
SKIDA1-204ENST00000633225 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
SKIDA1-204ENST00000633225 RNF17Q9BXT8 1623 aaKnown RBP29.1■■■□□ 2.25
SKIDA1-204ENST00000633225 MROH1Q8NDA8 1641 aa29.09■■■□□ 2.25
SKIDA1-204ENST00000633225 KIF3BO15066 747 aa29.09■■■□□ 2.25
SKIDA1-204ENST00000633225 MLECQ14165 292 aa29.08■■■□□ 2.25
SKIDA1-204ENST00000633225 DEPDC5O75140 1603 aa29.06■■■□□ 2.24
SKIDA1-204ENST00000633225 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms