RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 EFCAB2Q5VUJ9 269 aa29.53■■■□□ 2.32
PNKP-224ENST00000631020 MAGI2Q86UL8 1455 aa29.52■■■□□ 2.32
PNKP-224ENST00000631020 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
PNKP-224ENST00000631020 SCAPERQ9BY12 1400 aa29.5■■■□□ 2.31
PNKP-224ENST00000631020 ADAMTSL3P82987 1691 aa29.47■■■□□ 2.31
PNKP-224ENST00000631020 ARHGAP5Q13017 1502 aa29.46■■■□□ 2.31
PNKP-224ENST00000631020 CDC42BPBQ9Y5S2 1711 aa29.45■■■□□ 2.31
PNKP-224ENST00000631020 ZFYVE16Q7Z3T8 1539 aa29.45■■■□□ 2.3
PNKP-224ENST00000631020 PREX2Q70Z35 1606 aa29.45■■■□□ 2.3
PNKP-224ENST00000631020 BCORL1Q5H9F3 1711 aa29.44■■■□□ 2.3
PNKP-224ENST00000631020 ZNF518AQ6AHZ1 1483 aa29.4■■■□□ 2.3
PNKP-224ENST00000631020 CDC42BPAQ5VT25 1732 aa29.38■■■□□ 2.29
PNKP-224ENST00000631020 YEATS2Q9ULM3 1422 aa29.38■■■□□ 2.29
PNKP-224ENST00000631020 KDM5CP41229 1560 aa29.36■■■□□ 2.29
PNKP-224ENST00000631020 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
PNKP-224ENST00000631020 ABCC1P33527 1531 aa29.32■■■□□ 2.28
PNKP-224ENST00000631020 PTPRMP28827 1452 aa29.31■■■□□ 2.28
PNKP-224ENST00000631020 MADDQ8WXG6 1647 aa29.31■■■□□ 2.28
PNKP-224ENST00000631020 ATP10AO60312 1499 aa29.3■■■□□ 2.28
PNKP-224ENST00000631020 SIGLEC1Q9BZZ2 1709 aa29.29■■■□□ 2.28
PNKP-224ENST00000631020 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
PNKP-224ENST00000631020 HECW2Q9P2P5 1572 aa29.28■■■□□ 2.28
PNKP-224ENST00000631020 C9orf84Q5VXU9 1444 aa29.27■■■□□ 2.28
PNKP-224ENST00000631020 GPATCH8Q9UKJ3 1502 aaKnown RBP29.27■■■□□ 2.28
PNKP-224ENST00000631020 MTUS2Q5JR59 1369 aa29.26■■■□□ 2.27
PNKP-224ENST00000631020 MLH3Q9UHC1 1453 aa29.25■■■□□ 2.27
PNKP-224ENST00000631020 AFAP1Q8N556 730 aa29.25■■■□□ 2.27
PNKP-224ENST00000631020 EHBP1L1Q8N3D4 1523 aa29.24■■■□□ 2.27
PNKP-224ENST00000631020 ARHGEF12Q9NZN5 1544 aa29.23■■■□□ 2.27
PNKP-224ENST00000631020 TIAM1Q13009 1591 aa29.22■■■□□ 2.27
PNKP-224ENST00000631020 REREQ9P2R6 1566 aa29.21■■■□□ 2.27
PNKP-224ENST00000631020 RIMS1Q86UR5 1692 aaKnown RBP29.2■■■□□ 2.27
PNKP-224ENST00000631020 SAMD9LQ8IVG5 1584 aa29.2■■■□□ 2.27
PNKP-224ENST00000631020 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
PNKP-224ENST00000631020 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
PNKP-224ENST00000631020 DIP2CQ9Y2E4 1556 aa29.19■■■□□ 2.26
PNKP-224ENST00000631020 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
PNKP-224ENST00000631020 APLP2Q06481 763 aa29.18■■■□□ 2.26
PNKP-224ENST00000631020 KANK4Q5T7N3 995 aaPredicted RBP29.18■■■□□ 2.26
PNKP-224ENST00000631020 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
PNKP-224ENST00000631020 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
PNKP-224ENST00000631020 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
PNKP-224ENST00000631020 FER1L4A9Z1Z3 1794 aa29.14■■■□□ 2.26
PNKP-224ENST00000631020 CFDP1Q9UEE9 299 aaPredicted RBP29.13■■■□□ 2.25
PNKP-224ENST00000631020 SYCP2Q9BX26 1530 aa29.13■■■□□ 2.25
PNKP-224ENST00000631020 KIDINS220Q9ULH0 1771 aa29.13■■■□□ 2.25
PNKP-224ENST00000631020 LRRC9Q6ZRR7 1453 aa29.11■■■□□ 2.25
PNKP-224ENST00000631020 ZNF777Q9ULD5 760 aaPredicted RBP29.1■■■□□ 2.25
PNKP-224ENST00000631020 MYT1LQ9UL68 1186 aa29.1■■■□□ 2.25
PNKP-224ENST00000631020 AGLP35573 1532 aa29.09■■■□□ 2.25
PNKP-224ENST00000631020 SUPT6HQ7KZ85 1726 aaKnown RBP29.07■■■□□ 2.24
PNKP-224ENST00000631020 MLECQ14165 292 aa29.05■■■□□ 2.24
PNKP-224ENST00000631020 HNRNPMP52272 730 aaKnown RBP eCLIP29.02■■■□□ 2.24
PNKP-224ENST00000631020 NCOA2Q15596 1464 aa29.02■■■□□ 2.24
PNKP-224ENST00000631020 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
PNKP-224ENST00000631020 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
PNKP-224ENST00000631020 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
PNKP-224ENST00000631020 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
PNKP-224ENST00000631020 LMTK3Q96Q04 1460 aa28.99■■■□□ 2.23
PNKP-224ENST00000631020 MBD5Q9P267 1494 aa28.96■■■□□ 2.23
PNKP-224ENST00000631020 ZNF644Q9H582 1327 aaPredicted RBP28.91■■■□□ 2.22
PNKP-224ENST00000631020 PLXNC1O60486 1568 aa28.91■■■□□ 2.22
PNKP-224ENST00000631020 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.22
PNKP-224ENST00000631020 RTEL1-TNFRSF6BF6WH68 1400 aa28.89■■■□□ 2.22
PNKP-224ENST00000631020 CAMSAP2Q08AD1 1489 aa28.88■■■□□ 2.21
PNKP-224ENST00000631020 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
PNKP-224ENST00000631020 A2MP01023 1474 aa28.87■■■□□ 2.21
PNKP-224ENST00000631020 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
PNKP-224ENST00000631020 PREX1Q8TCU6 1659 aa28.87■■■□□ 2.21
PNKP-224ENST00000631020 SETD1BQ9UPS6 1966 aaKnown RBP28.86■■■□□ 2.21
PNKP-224ENST00000631020 CCDC141Q6ZP82 1450 aa28.85■■■□□ 2.21
PNKP-224ENST00000631020 PLPPR3Q6T4P5 718 aa28.84■■■□□ 2.21
PNKP-224ENST00000631020 C3P01024 1663 aa28.84■■■□□ 2.21
PNKP-224ENST00000631020 ESF1Q9H501 851 aaKnown RBP28.83■■■□□ 2.21
PNKP-224ENST00000631020 ARHGEF5Q12774 1597 aa28.83■■■□□ 2.21
PNKP-224ENST00000631020 MROH2AA6NES4 1674 aa28.82■■■□□ 2.2
PNKP-224ENST00000631020 CEBPAP49715 358 aaPredicted RBP28.79■■■□□ 2.2
PNKP-224ENST00000631020 MIA2Q96PC5 1412 aa28.77■■■□□ 2.2
PNKP-224ENST00000631020 MYOM3Q5VTT5 1437 aa28.76■■■□□ 2.19
PNKP-224ENST00000631020 PPP6R1Q9UPN7 881 aa28.74■■■□□ 2.19
PNKP-224ENST00000631020 UHRF1BP1Q6BDS2 1440 aa28.73■■■□□ 2.19
PNKP-224ENST00000631020 DHX29Q7Z478 1369 aaKnown RBP28.73■■■□□ 2.19
PNKP-224ENST00000631020 HSPA2P54652 639 aa28.73■■■□□ 2.19
PNKP-224ENST00000631020 NPATQ14207 1427 aa28.7■■■□□ 2.18
PNKP-224ENST00000631020 CLTCQ00610 1675 aaKnown RBP28.69■■■□□ 2.18
PNKP-224ENST00000631020 MAST1Q9Y2H9 1570 aa28.68■■■□□ 2.18
PNKP-224ENST00000631020 TSPY4P0CV99 314 aa28.68■■■□□ 2.18
PNKP-224ENST00000631020 TSPY10P0CW01 314 aa28.68■■■□□ 2.18
PNKP-224ENST00000631020 ZMYM3Q14202 1370 aa28.68■■■□□ 2.18
PNKP-224ENST00000631020 FAM135AQ9P2D6 1515 aa28.65■■■□□ 2.18
PNKP-224ENST00000631020 FGD6Q6ZV73 1430 aa28.65■■■□□ 2.18
PNKP-224ENST00000631020 GGT6Q6P531 493 aa28.64■■■□□ 2.17
PNKP-224ENST00000631020 ILDR1Q86SU0 546 aaPredicted RBP28.59■■■□□ 2.17
PNKP-224ENST00000631020 STRCQ7RTU9 1775 aa28.57■■■□□ 2.16
PNKP-224ENST00000631020 PTPN23Q9H3S7 1636 aa28.57■■■□□ 2.16
PNKP-224ENST00000631020 KIF3BO15066 747 aa28.56■■■□□ 2.16
PNKP-224ENST00000631020 PTPRKQ15262 1439 aa28.55■■■□□ 2.16
PNKP-224ENST00000631020 TCOF1Q13428 1488 aaKnown RBP28.55■■■□□ 2.16
PNKP-224ENST00000631020 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
PNKP-224ENST00000631020 EIF2AK4Q9P2K8 1649 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms