RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
SRGAP1-207ENST00000631006 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
SRGAP1-207ENST00000631006 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
SRGAP1-207ENST00000631006 FRAT2O75474 233 aaPredicted RBP8.18□□□□□ -1.1
SRGAP1-207ENST00000631006 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
SRGAP1-207ENST00000631006 KLHL34Q8N239 644 aa8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 GGT6Q6P531 493 aa8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 ZCCHC6Q5VYS8 1495 aaKnown RBP8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 MORC1Q86VD1 984 aa8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 CTDP1Q9Y5B0 961 aaPredicted RBP8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
SRGAP1-207ENST00000631006 RGS3P49796 1198 aa8.16□□□□□ -1.1
SRGAP1-207ENST00000631006 RASSF8Q8NHQ8 419 aa8.16□□□□□ -1.1
SRGAP1-207ENST00000631006 MARCH6O60337 910 aa8.16□□□□□ -1.1
SRGAP1-207ENST00000631006 TMF1P82094 1093 aa8.16□□□□□ -1.1
SRGAP1-207ENST00000631006 EIF4G1Q04637 1599 aaKnown RBP8.15□□□□□ -1.1
SRGAP1-207ENST00000631006 CEP89Q96ST8 783 aa8.15□□□□□ -1.1
SRGAP1-207ENST00000631006 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
SRGAP1-207ENST00000631006 A0A0U1RQG5 324 aaPredicted RBP8.15□□□□□ -1.1
SRGAP1-207ENST00000631006 HSCBQ8IWL3 235 aa8.15□□□□□ -1.11
SRGAP1-207ENST00000631006 CFAP44Q96MT7 982 aa8.15□□□□□ -1.11
SRGAP1-207ENST00000631006 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 CLIP1P30622 1438 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 APBB1O00213 710 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 CCNB3Q8WWL7 1395 aa8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 HSP90B1P14625 803 aaKnown RBP8.14□□□□□ -1.11
SRGAP1-207ENST00000631006 EVA1CP58658 441 aa8.13□□□□□ -1.11
SRGAP1-207ENST00000631006 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
SRGAP1-207ENST00000631006 CHMP4AQ9BY43 222 aa8.13□□□□□ -1.11
SRGAP1-207ENST00000631006 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
SRGAP1-207ENST00000631006 CCDC34Q96HJ3 373 aa8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 HTATSF1O43719 755 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 TPM4P67936 248 aa8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 CALD1Q05682 793 aaKnown RBP8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
SRGAP1-207ENST00000631006 NACADO15069 1562 aa8.11□□□□□ -1.11
SRGAP1-207ENST00000631006 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
SRGAP1-207ENST00000631006 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
SRGAP1-207ENST00000631006 CREBRFQ8IUR6 639 aa8.1□□□□□ -1.11
SRGAP1-207ENST00000631006 STK31Q9BXU1 1019 aa8.1□□□□□ -1.11
SRGAP1-207ENST00000631006 RAD21O60216 631 aa8.1□□□□□ -1.11
SRGAP1-207ENST00000631006 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-207ENST00000631006 FBXW7Q969H0 707 aa8.1□□□□□ -1.11
SRGAP1-207ENST00000631006 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
SRGAP1-207ENST00000631006 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
SRGAP1-207ENST00000631006 HDAC5Q9UQL6 1122 aa8.09□□□□□ -1.11
SRGAP1-207ENST00000631006 FBXO3Q9UK99 471 aa8.09□□□□□ -1.11
SRGAP1-207ENST00000631006 AMOTL1Q8IY63 956 aa8.08□□□□□ -1.12
SRGAP1-207ENST00000631006 AMPHP49418 695 aa8.08□□□□□ -1.12
SRGAP1-207ENST00000631006 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-207ENST00000631006 LTV1Q96GA3 475 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-207ENST00000631006 MSNP26038 577 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-207ENST00000631006 SPRYD3Q8NCJ5 442 aa8.07□□□□□ -1.12
SRGAP1-207ENST00000631006 KIF27Q86VH2 1401 aa8.06□□□□□ -1.12
SRGAP1-207ENST00000631006 TRIM6-TRIM34B2RNG4 842 aa8.05□□□□□ -1.12
SRGAP1-207ENST00000631006 ITPRIPQ8IWB1 547 aa8.05□□□□□ -1.12
SRGAP1-207ENST00000631006 FOXD1Q16676 465 aa8.05□□□□□ -1.12
SRGAP1-207ENST00000631006 GOLGA3Q08378 1498 aa8.05□□□□□ -1.12
SRGAP1-207ENST00000631006 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
SRGAP1-207ENST00000631006 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
SRGAP1-207ENST00000631006 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 GOLGA6L1Q8N7Z2 621 aa8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 AKAP17AQ02040 695 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 PES1O00541 588 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 SLC4A10Q6U841 1118 aa8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 CARMIL2Q6F5E8 1435 aa8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
SRGAP1-207ENST00000631006 TPM3P06753 285 aa8.02□□□□□ -1.12
SRGAP1-207ENST00000631006 TPD52L1Q16890 204 aaPredicted RBP8.02□□□□□ -1.12
SRGAP1-207ENST00000631006 HMMRO75330 724 aa8.02□□□□□ -1.13
SRGAP1-207ENST00000631006 TERF2IPQ9NYB0 399 aa8.02□□□□□ -1.13
SRGAP1-207ENST00000631006 NUTM2FA1L443 756 aa8.02□□□□□ -1.13
SRGAP1-207ENST00000631006 TPM2P07951 284 aa8.02□□□□□ -1.13
SRGAP1-207ENST00000631006 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
SRGAP1-207ENST00000631006 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 CCDC43Q96MW1 224 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 USP35Q9P2H5 1018 aa8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 NUTM2DQ5VT03 806 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 PTMSP20962 102 aa8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 MIER1Q8N108 512 aa8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 SYAP1Q96A49 352 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 DHX16O60231 1041 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-207ENST00000631006 SAMD1Q6SPF0 538 aaPredicted RBP8□□□□□ -1.13
SRGAP1-207ENST00000631006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8□□□□□ -1.13
SRGAP1-207ENST00000631006 TTC5Q8N0Z6 440 aa8□□□□□ -1.13
SRGAP1-207ENST00000631006 KTN1Q86UP2 1357 aaKnown RBP8□□□□□ -1.13
SRGAP1-207ENST00000631006 EEA1Q15075 1411 aa8□□□□□ -1.13
SRGAP1-207ENST00000631006 SYNE3Q6ZMZ3 975 aa8□□□□□ -1.13
SRGAP1-207ENST00000631006 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
SRGAP1-207ENST00000631006 WASHC2CQ9Y4E1 1318 aa7.99□□□□□ -1.13
SRGAP1-207ENST00000631006 EFCAB2Q5VUJ9 269 aa7.99□□□□□ -1.13
SRGAP1-207ENST00000631006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms