RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-222ENST00000630907 PREX2Q70Z35 1606 aa40.44■■■■■ 4.06
UBE3A-222ENST00000630907 CDC42BPAQ5VT25 1732 aa40.44■■■■■ 4.06
UBE3A-222ENST00000630907 CFAP74Q9C0B2 1584 aa40.4■■■■■ 4.06
UBE3A-222ENST00000630907 CDC42BPBQ9Y5S2 1711 aa40.4■■■■■ 4.06
UBE3A-222ENST00000630907 CFDP1Q9UEE9 299 aaPredicted RBP40.4■■■■■ 4.06
UBE3A-222ENST00000630907 AKNAQ7Z591 1439 aa40.39■■■■■ 4.06
UBE3A-222ENST00000630907 PPARGC1BQ86YN6 1023 aaKnown RBP40.36■■■■■ 4.05
UBE3A-222ENST00000630907 ITSN2Q9NZM3 1697 aa40.34■■■■■ 4.05
UBE3A-222ENST00000630907 ZNF777Q9ULD5 760 aaPredicted RBP40.33■■■■■ 4.05
UBE3A-222ENST00000630907 KDM6BO15054 1643 aa40.32■■■■■ 4.05
UBE3A-222ENST00000630907 COL17A1Q9UMD9 1497 aaPredicted RBP40.3■■■■■ 4.04
UBE3A-222ENST00000630907 ADGRL1O94910 1474 aa40.28■■■■■ 4.04
UBE3A-222ENST00000630907 MYOM3Q5VTT5 1437 aa40.27■■■■■ 4.04
UBE3A-222ENST00000630907 SCAPERQ9BY12 1400 aa40.24■■■■■ 4.03
UBE3A-222ENST00000630907 DENND4BO75064 1496 aaPredicted RBP40.2■■■■■ 4.03
UBE3A-222ENST00000630907 SAMD9LQ8IVG5 1584 aa40.2■■■■■ 4.03
UBE3A-222ENST00000630907 MIA2Q96PC5 1412 aa40.19■■■■■ 4.02
UBE3A-222ENST00000630907 RAPGEF3O95398 923 aa40.18■■■■■ 4.02
UBE3A-222ENST00000630907 ZNF644Q9H582 1327 aaPredicted RBP40.17■■■■■ 4.02
UBE3A-222ENST00000630907 ABCC1P33527 1531 aa40.16■■■■■ 4.02
UBE3A-222ENST00000630907 PLEKHH2Q8IVE3 1493 aa40.16■■■■■ 4.02
UBE3A-222ENST00000630907 KIAA1107Q9UPP5 1409 aa40.13■■■■■ 4.01
UBE3A-222ENST00000630907 ARHGEF12Q9NZN5 1544 aa40.11■■■■■ 4.01
UBE3A-222ENST00000630907 FGD6Q6ZV73 1430 aa40.1■■■■■ 4.01
UBE3A-222ENST00000630907 POGZQ7Z3K3 1410 aa40.1■■■■■ 4.01
UBE3A-222ENST00000630907 HNRNPMP52272 730 aaKnown RBP eCLIP40.1■■■■■ 4.01
UBE3A-222ENST00000630907 CAMSAP2Q08AD1 1489 aa40.1■■■■■ 4.01
UBE3A-222ENST00000630907 SYCP2Q9BX26 1530 aa40.07■■■■■ 4.01
UBE3A-222ENST00000630907 TRAPPC8Q9Y2L5 1435 aa40.05■■■■■ 4
UBE3A-222ENST00000630907 FRMPD1Q5SYB0 1578 aa40.05■■■■■ 4
UBE3A-222ENST00000630907 RICTORQ6R327 1708 aa40.05■■■■■ 4
UBE3A-222ENST00000630907 AFAP1Q8N556 730 aa40.04■■■■■ 4
UBE3A-222ENST00000630907 ZNF518AQ6AHZ1 1483 aa40.03■■■■■ 4
UBE3A-222ENST00000630907 PTPN23Q9H3S7 1636 aa40.01■■■■■ 4
UBE3A-222ENST00000630907 MBD5Q9P267 1494 aa40■■■■□ 3.99
UBE3A-222ENST00000630907 TCOF1Q13428 1488 aaKnown RBP39.97■■■■□ 3.99
UBE3A-222ENST00000630907 RSPH4AQ5TD94 716 aa39.96■■■■□ 3.99
UBE3A-222ENST00000630907 ZMYM4Q5VZL5 1548 aa39.93■■■■□ 3.98
UBE3A-222ENST00000630907 KDM5CP41229 1560 aa39.93■■■■□ 3.98
UBE3A-222ENST00000630907 FAM50AQ14320 339 aaKnown RBP39.91■■■■□ 3.98
UBE3A-222ENST00000630907 ARHGEF5Q12774 1597 aa39.89■■■■□ 3.98
UBE3A-222ENST00000630907 MYT1LQ9UL68 1186 aa39.89■■■■□ 3.98
UBE3A-222ENST00000630907 CCDC141Q6ZP82 1450 aa39.88■■■■□ 3.98
UBE3A-222ENST00000630907 MAGI2Q86UL8 1455 aa39.88■■■■□ 3.98
UBE3A-222ENST00000630907 SPAG9O60271 1321 aaKnown RBP39.87■■■■□ 3.97
UBE3A-222ENST00000630907 MLH3Q9UHC1 1453 aa39.85■■■■□ 3.97
UBE3A-222ENST00000630907 TSPY4P0CV99 314 aa39.82■■■■□ 3.97
UBE3A-222ENST00000630907 TSPY10P0CW01 314 aa39.82■■■■□ 3.97
UBE3A-222ENST00000630907 HECW2Q9P2P5 1572 aa39.81■■■■□ 3.96
UBE3A-222ENST00000630907 RRBP1Q9P2E9 1410 aaKnown RBP39.81■■■■□ 3.96
UBE3A-222ENST00000630907 ZFYVE16Q7Z3T8 1539 aa39.81■■■■□ 3.96
UBE3A-222ENST00000630907 YEATS2Q9ULM3 1422 aa39.79■■■■□ 3.96
UBE3A-222ENST00000630907 ABCC5O15440 1437 aa39.76■■■■□ 3.96
UBE3A-222ENST00000630907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.76■■■■□ 3.966e-7■□□□□ 8.4
UBE3A-222ENST00000630907 ARHGEF40Q8TER5 1519 aa39.75■■■■□ 3.95
UBE3A-222ENST00000630907 DAPK1P53355 1430 aa39.74■■■■□ 3.95
UBE3A-222ENST00000630907 RTEL1-TNFRSF6BF6WH68 1400 aa39.74■■■■□ 3.95
UBE3A-222ENST00000630907 DNMT1P26358 1616 aaKnown RBP39.73■■■■□ 3.95
UBE3A-222ENST00000630907 ATP7AQ04656 1500 aa39.73■■■■□ 3.95
UBE3A-222ENST00000630907 KIDINS220Q9ULH0 1771 aa39.72■■■■□ 3.95
UBE3A-222ENST00000630907 INO80Q9ULG1 1556 aaPredicted RBP39.71■■■■□ 3.95
UBE3A-222ENST00000630907 C9orf84Q5VXU9 1444 aa39.68■■■■□ 3.94
UBE3A-222ENST00000630907 ATP10AO60312 1499 aa39.68■■■■□ 3.94
UBE3A-222ENST00000630907 SHANK2Q9UPX8 1470 aa39.66■■■■□ 3.94
UBE3A-222ENST00000630907 MAST1Q9Y2H9 1570 aa39.66■■■■□ 3.94
UBE3A-222ENST00000630907 DIP2CQ9Y2E4 1556 aa39.65■■■■□ 3.94
UBE3A-222ENST00000630907 ABCA6Q8N139 1617 aa39.64■■■■□ 3.94
UBE3A-222ENST00000630907 CROCC2H7BZ55 1655 aa39.63■■■■□ 3.93
UBE3A-222ENST00000630907 ITGAEP38570 1179 aa39.6■■■■□ 3.93
UBE3A-222ENST00000630907 CHIC2Q9UKJ5 165 aa39.6■■■■□ 3.93
UBE3A-222ENST00000630907 PTPRKQ15262 1439 aa39.55■■■■□ 3.92
UBE3A-222ENST00000630907 ARID4BQ4LE39 1312 aaPredicted RBP39.53■■■■□ 3.92
UBE3A-222ENST00000630907 REREQ9P2R6 1566 aa39.52■■■■□ 3.92
UBE3A-222ENST00000630907 A2MP01023 1474 aa39.52■■■■□ 3.92
UBE3A-222ENST00000630907 ANKRD30AQ9BXX3 1397 aa39.51■■■■□ 3.92
UBE3A-222ENST00000630907 ADGBQ8N7X0 1667 aa39.49■■■■□ 3.91
UBE3A-222ENST00000630907 PLXNC1O60486 1568 aa39.49■■■■□ 3.91
UBE3A-222ENST00000630907 DHX29Q7Z478 1369 aaKnown RBP39.47■■■■□ 3.91
UBE3A-222ENST00000630907 RRP7BPQ9NSQ0 103 aa39.47■■■■□ 3.91
UBE3A-222ENST00000630907 ADGRL2O95490 1459 aa39.47■■■■□ 3.91
UBE3A-222ENST00000630907 NCOA1Q15788 1441 aa39.46■■■■□ 3.91
UBE3A-222ENST00000630907 KIF15Q9NS87 1388 aa39.45■■■■□ 3.91
UBE3A-222ENST00000630907 SIGLEC1Q9BZZ2 1709 aa39.43■■■■□ 3.9
UBE3A-222ENST00000630907 AGLP35573 1532 aa39.41■■■■□ 3.9
UBE3A-222ENST00000630907 ROCK1Q13464 1354 aa39.41■■■■□ 3.9
UBE3A-222ENST00000630907 DUOX2Q9NRD8 1548 aa39.38■■■■□ 3.89
UBE3A-222ENST00000630907 MLECQ14165 292 aa39.34■■■■□ 3.89
UBE3A-222ENST00000630907 KIF3BO15066 747 aa39.3■■■■□ 3.88
UBE3A-222ENST00000630907 ERBINQ96RT1 1412 aa39.28■■■■□ 3.88
UBE3A-222ENST00000630907 BCORL1Q5H9F3 1711 aa39.28■■■■□ 3.88
UBE3A-222ENST00000630907 GGT6Q6P531 493 aa39.23■■■■□ 3.87
UBE3A-222ENST00000630907 ANKRD50Q9ULJ7 1429 aa39.23■■■■□ 3.87
UBE3A-222ENST00000630907 KDM4FA0A1W2PPD8 638 aa39.22■■■■□ 3.87
UBE3A-222ENST00000630907 EIF2AK4Q9P2K8 1649 aaKnown RBP39.21■■■■□ 3.87
UBE3A-222ENST00000630907 ADAMTSL3P82987 1691 aa39.17■■■■□ 3.86
UBE3A-222ENST00000630907 NAIPQ13075 1403 aa39.14■■■■□ 3.86
UBE3A-222ENST00000630907 HFM1A2PYH4 1435 aa39.14■■■■□ 3.86
UBE3A-222ENST00000630907 PPP6R1Q9UPN7 881 aa39.13■■■■□ 3.85
UBE3A-222ENST00000630907 ESF1Q9H501 851 aaKnown RBP39.11■■■■□ 3.85
UBE3A-222ENST00000630907 MADDQ8WXG6 1647 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms