RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
PTPN7-219ENST00000629151 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
PTPN7-219ENST00000629151 KIF13AQ9H1H9 1805 aa17.68■□□□□ 0.42
PTPN7-219ENST00000629151 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
PTPN7-219ENST00000629151 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
PTPN7-219ENST00000629151 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
PTPN7-219ENST00000629151 MYO5CQ9NQX4 1742 aa17.65■□□□□ 0.42
PTPN7-219ENST00000629151 CFAP74Q9C0B2 1584 aa17.65■□□□□ 0.42
PTPN7-219ENST00000629151 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
PTPN7-219ENST00000629151 ITSN2Q9NZM3 1697 aa17.64■□□□□ 0.42
PTPN7-219ENST00000629151 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.42
PTPN7-219ENST00000629151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.41
PTPN7-219ENST00000629151 SCAPERQ9BY12 1400 aa17.61■□□□□ 0.41
PTPN7-219ENST00000629151 ADGRL1O94910 1474 aa17.61■□□□□ 0.41
PTPN7-219ENST00000629151 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
PTPN7-219ENST00000629151 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-219ENST00000629151 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-219ENST00000629151 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
PTPN7-219ENST00000629151 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.41
PTPN7-219ENST00000629151 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTPN7-219ENST00000629151 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
PTPN7-219ENST00000629151 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
PTPN7-219ENST00000629151 TSPY4P0CV99 314 aa17.57■□□□□ 0.4
PTPN7-219ENST00000629151 TSPY10P0CW01 314 aa17.57■□□□□ 0.4
PTPN7-219ENST00000629151 PPRC1Q5VV67 1664 aaKnown RBP17.57■□□□□ 0.4
PTPN7-219ENST00000629151 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
PTPN7-219ENST00000629151 ABCC1P33527 1531 aa17.54■□□□□ 0.4
PTPN7-219ENST00000629151 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
PTPN7-219ENST00000629151 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
PTPN7-219ENST00000629151 TSPOAP1O95153 1857 aa17.54■□□□□ 0.4
PTPN7-219ENST00000629151 SAMD9LQ8IVG5 1584 aa17.53■□□□□ 0.4
PTPN7-219ENST00000629151 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
PTPN7-219ENST00000629151 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
PTPN7-219ENST00000629151 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
PTPN7-219ENST00000629151 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
PTPN7-219ENST00000629151 ARHGEF12Q9NZN5 1544 aa17.51■□□□□ 0.39
PTPN7-219ENST00000629151 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
PTPN7-219ENST00000629151 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
PTPN7-219ENST00000629151 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
PTPN7-219ENST00000629151 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
PTPN7-219ENST00000629151 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-219ENST00000629151 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
PTPN7-219ENST00000629151 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
PTPN7-219ENST00000629151 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
PTPN7-219ENST00000629151 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
PTPN7-219ENST00000629151 KDM6BO15054 1643 aa17.47■□□□□ 0.39
PTPN7-219ENST00000629151 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
PTPN7-219ENST00000629151 ABCC5O15440 1437 aa17.47■□□□□ 0.39
PTPN7-219ENST00000629151 DAPK1P53355 1430 aa17.46■□□□□ 0.39
PTPN7-219ENST00000629151 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
PTPN7-219ENST00000629151 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
PTPN7-219ENST00000629151 KDM5CP41229 1560 aa17.43■□□□□ 0.38
PTPN7-219ENST00000629151 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
PTPN7-219ENST00000629151 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
PTPN7-219ENST00000629151 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
PTPN7-219ENST00000629151 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
PTPN7-219ENST00000629151 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
PTPN7-219ENST00000629151 ITGAEP38570 1179 aa17.4■□□□□ 0.38
PTPN7-219ENST00000629151 MAST1Q9Y2H9 1570 aa17.39■□□□□ 0.37
PTPN7-219ENST00000629151 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
PTPN7-219ENST00000629151 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
PTPN7-219ENST00000629151 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
PTPN7-219ENST00000629151 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
PTPN7-219ENST00000629151 ATP10AO60312 1499 aa17.37■□□□□ 0.37
PTPN7-219ENST00000629151 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
PTPN7-219ENST00000629151 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
PTPN7-219ENST00000629151 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
PTPN7-219ENST00000629151 ADGRL2O95490 1459 aa17.36■□□□□ 0.37
PTPN7-219ENST00000629151 ATP7AQ04656 1500 aa17.36■□□□□ 0.37
PTPN7-219ENST00000629151 PTPRKQ15262 1439 aa17.35■□□□□ 0.37
PTPN7-219ENST00000629151 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
PTPN7-219ENST00000629151 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
PTPN7-219ENST00000629151 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
PTPN7-219ENST00000629151 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-219ENST00000629151 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
PTPN7-219ENST00000629151 A2MP01023 1474 aa17.31■□□□□ 0.36
PTPN7-219ENST00000629151 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
PTPN7-219ENST00000629151 ARHGEF40Q8TER5 1519 aa17.29■□□□□ 0.36
PTPN7-219ENST00000629151 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
PTPN7-219ENST00000629151 KIDINS220Q9ULH0 1771 aa17.29■□□□□ 0.36
PTPN7-219ENST00000629151 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
PTPN7-219ENST00000629151 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
PTPN7-219ENST00000629151 CROCC2H7BZ55 1655 aa17.28■□□□□ 0.36
PTPN7-219ENST00000629151 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
PTPN7-219ENST00000629151 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
PTPN7-219ENST00000629151 ANKRD50Q9ULJ7 1429 aa17.27■□□□□ 0.35
PTPN7-219ENST00000629151 HRCP23327 699 aa17.26■□□□□ 0.35
PTPN7-219ENST00000629151 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
PTPN7-219ENST00000629151 AGLP35573 1532 aa17.26■□□□□ 0.35
PTPN7-219ENST00000629151 ARID4BQ4LE39 1312 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-219ENST00000629151 KIF3BO15066 747 aa17.25■□□□□ 0.35
PTPN7-219ENST00000629151 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
PTPN7-219ENST00000629151 NAIPQ13075 1403 aa17.23■□□□□ 0.35
PTPN7-219ENST00000629151 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
PTPN7-219ENST00000629151 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
PTPN7-219ENST00000629151 KANK1Q14678 1352 aa17.18■□□□□ 0.34
PTPN7-219ENST00000629151 GGT6Q6P531 493 aa17.18■□□□□ 0.34
PTPN7-219ENST00000629151 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
PTPN7-219ENST00000629151 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
PTPN7-219ENST00000629151 EIF2AK4Q9P2K8 1649 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms