RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 VARS2Q5ST30 1063 aaKnown RBP10.8□□□□□ -0.68
VPS8-228ENST00000628962 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
VPS8-228ENST00000628962 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
VPS8-228ENST00000628962 NLRP6P59044 892 aa10.73□□□□□ -0.69
VPS8-228ENST00000628962 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
VPS8-228ENST00000628962 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
VPS8-228ENST00000628962 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
VPS8-228ENST00000628962 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
VPS8-228ENST00000628962 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
VPS8-228ENST00000628962 MFRPQ9BY79 579 aa10.67□□□□□ -0.7
VPS8-228ENST00000628962 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
VPS8-228ENST00000628962 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
VPS8-228ENST00000628962 KIF3CO14782 793 aa10.65□□□□□ -0.7
VPS8-228ENST00000628962 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
VPS8-228ENST00000628962 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
VPS8-228ENST00000628962 PTGER2P43116 358 aa10.61□□□□□ -0.71
VPS8-228ENST00000628962 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
VPS8-228ENST00000628962 STK25O00506 426 aa10.6□□□□□ -0.71
VPS8-228ENST00000628962 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
VPS8-228ENST00000628962 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
VPS8-228ENST00000628962 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS8-228ENST00000628962 SLC34A2O95436 690 aa10.54□□□□□ -0.72
VPS8-228ENST00000628962 NUDT7P0C024 238 aa10.54□□□□□ -0.72
VPS8-228ENST00000628962 PKD2Q13563 968 aa10.52□□□□□ -0.73
VPS8-228ENST00000628962 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
VPS8-228ENST00000628962 RGL2O15211 777 aa10.51□□□□□ -0.73
VPS8-228ENST00000628962 PBX2P40425 430 aa10.51□□□□□ -0.73
VPS8-228ENST00000628962 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
VPS8-228ENST00000628962 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
VPS8-228ENST00000628962 TMC2Q8TDI7 906 aa10.48□□□□□ -0.73
VPS8-228ENST00000628962 PPP1R37O75864 691 aa10.46□□□□□ -0.73
VPS8-228ENST00000628962 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
VPS8-228ENST00000628962 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
VPS8-228ENST00000628962 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
VPS8-228ENST00000628962 PTCD2Q8WV60 388 aaKnown RBP10.39□□□□□ -0.75
VPS8-228ENST00000628962 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
VPS8-228ENST00000628962 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
VPS8-228ENST00000628962 FOXK1P85037 733 aa10.36□□□□□ -0.75
VPS8-228ENST00000628962 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
VPS8-228ENST00000628962 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
VPS8-228ENST00000628962 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
VPS8-228ENST00000628962 TK2O00142 265 aa10.32□□□□□ -0.76
VPS8-228ENST00000628962 HRO43593 1189 aa10.31□□□□□ -0.76
VPS8-228ENST00000628962 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
VPS8-228ENST00000628962 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
VPS8-228ENST00000628962 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
VPS8-228ENST00000628962 PSEN2P49810 448 aa10.29□□□□□ -0.76
VPS8-228ENST00000628962 DSG2Q14126 1118 aa10.29□□□□□ -0.76
VPS8-228ENST00000628962 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
VPS8-228ENST00000628962 TBC1D12O60347 775 aa10.25□□□□□ -0.77
VPS8-228ENST00000628962 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
VPS8-228ENST00000628962 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
VPS8-228ENST00000628962 CHGAP10645 457 aaKnown RBP10.19□□□□□ -0.78
VPS8-228ENST00000628962 KCNK17Q96T54 332 aa10.19□□□□□ -0.78
VPS8-228ENST00000628962 NKX1-1Q15270 411 aaPredicted RBP10.18□□□□□ -0.78
VPS8-228ENST00000628962 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
VPS8-228ENST00000628962 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
VPS8-228ENST00000628962 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
VPS8-228ENST00000628962 KCNH8Q96L42 1107 aa10.16□□□□□ -0.78
VPS8-228ENST00000628962 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS8-228ENST00000628962 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
VPS8-228ENST00000628962 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
VPS8-228ENST00000628962 BCL2L12Q9HB09 334 aa10.14□□□□□ -0.79
VPS8-228ENST00000628962 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
VPS8-228ENST00000628962 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
VPS8-228ENST00000628962 RYDENQ9NUL5 291 aaKnown RBP10.12□□□□□ -0.79
VPS8-228ENST00000628962 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
VPS8-228ENST00000628962 FOSBP53539 338 aa10.1□□□□□ -0.79
VPS8-228ENST00000628962 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
VPS8-228ENST00000628962 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
VPS8-228ENST00000628962 PTPN5P54829 565 aa10.07□□□□□ -0.8
VPS8-228ENST00000628962 PTPREP23469 700 aa10.06□□□□□ -0.8
VPS8-228ENST00000628962 PDE4AP27815 886 aa10.06□□□□□ -0.8
VPS8-228ENST00000628962 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
VPS8-228ENST00000628962 ZBED2Q9BTP6 218 aa10.06□□□□□ -0.8
VPS8-228ENST00000628962 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
VPS8-228ENST00000628962 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
VPS8-228ENST00000628962 EVI5O60447 810 aa10.03□□□□□ -0.8
VPS8-228ENST00000628962 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
VPS8-228ENST00000628962 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
VPS8-228ENST00000628962 GTPBP6O43824 516 aaPredicted RBP10□□□□□ -0.81
VPS8-228ENST00000628962 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
VPS8-228ENST00000628962 WNT2BQ93097 391 aa9.99□□□□□ -0.81
VPS8-228ENST00000628962 RGS20O76081 388 aa9.98□□□□□ -0.81
VPS8-228ENST00000628962 MFSD10Q14728 455 aa9.98□□□□□ -0.81
VPS8-228ENST00000628962 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
VPS8-228ENST00000628962 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
VPS8-228ENST00000628962 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
VPS8-228ENST00000628962 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
VPS8-228ENST00000628962 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
VPS8-228ENST00000628962 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
VPS8-228ENST00000628962 A0A0G2JS52 829 aa9.94□□□□□ -0.82
VPS8-228ENST00000628962 PPP1R3GB7ZBB8 358 aa9.94□□□□□ -0.82
VPS8-228ENST00000628962 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
VPS8-228ENST00000628962 RABGEF1Q9UJ41 708 aa9.91□□□□□ -0.82
VPS8-228ENST00000628962 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
VPS8-228ENST00000628962 COL9A1P20849 921 aa9.89□□□□□ -0.83
VPS8-228ENST00000628962 PHF14O94880 888 aa9.87□□□□□ -0.83
VPS8-228ENST00000628962 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
VPS8-228ENST00000628962 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms