RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.45
NR1I3-235ENST00000628566 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-235ENST00000628566 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
NR1I3-235ENST00000628566 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
NR1I3-235ENST00000628566 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
NR1I3-235ENST00000628566 ITSN2Q9NZM3 1697 aa12.17□□□□□ -0.46
NR1I3-235ENST00000628566 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
NR1I3-235ENST00000628566 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-235ENST00000628566 COL17A1Q9UMD9 1497 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-235ENST00000628566 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
NR1I3-235ENST00000628566 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.46
NR1I3-235ENST00000628566 CDC42BPAQ5VT25 1732 aa12.15□□□□□ -0.46
NR1I3-235ENST00000628566 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
NR1I3-235ENST00000628566 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-235ENST00000628566 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
NR1I3-235ENST00000628566 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
NR1I3-235ENST00000628566 CDC42BPBQ9Y5S2 1711 aa12.14□□□□□ -0.47
NR1I3-235ENST00000628566 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
NR1I3-235ENST00000628566 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
NR1I3-235ENST00000628566 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
NR1I3-235ENST00000628566 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
NR1I3-235ENST00000628566 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
NR1I3-235ENST00000628566 ABCC1P33527 1531 aa12.11□□□□□ -0.47
NR1I3-235ENST00000628566 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
NR1I3-235ENST00000628566 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
NR1I3-235ENST00000628566 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-235ENST00000628566 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
NR1I3-235ENST00000628566 ZFYVE16Q7Z3T8 1539 aa12.08□□□□□ -0.48
NR1I3-235ENST00000628566 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
NR1I3-235ENST00000628566 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
NR1I3-235ENST00000628566 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
NR1I3-235ENST00000628566 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
NR1I3-235ENST00000628566 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
NR1I3-235ENST00000628566 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
NR1I3-235ENST00000628566 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
NR1I3-235ENST00000628566 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
NR1I3-235ENST00000628566 KDM5CP41229 1560 aa12.05□□□□□ -0.48
NR1I3-235ENST00000628566 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
NR1I3-235ENST00000628566 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.48
NR1I3-235ENST00000628566 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
NR1I3-235ENST00000628566 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
NR1I3-235ENST00000628566 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
NR1I3-235ENST00000628566 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
NR1I3-235ENST00000628566 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
NR1I3-235ENST00000628566 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
NR1I3-235ENST00000628566 ATP10AO60312 1499 aa12.02□□□□□ -0.48
NR1I3-235ENST00000628566 ARHGEF12Q9NZN5 1544 aa12.02□□□□□ -0.48
NR1I3-235ENST00000628566 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
NR1I3-235ENST00000628566 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
NR1I3-235ENST00000628566 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-235ENST00000628566 YEATS2Q9ULM3 1422 aa12.01□□□□□ -0.49
NR1I3-235ENST00000628566 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
NR1I3-235ENST00000628566 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
NR1I3-235ENST00000628566 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
NR1I3-235ENST00000628566 MBD5Q9P267 1494 aa11.99□□□□□ -0.49
NR1I3-235ENST00000628566 ATP7AQ04656 1500 aa11.99□□□□□ -0.49
NR1I3-235ENST00000628566 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
NR1I3-235ENST00000628566 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
NR1I3-235ENST00000628566 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
NR1I3-235ENST00000628566 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
NR1I3-235ENST00000628566 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
NR1I3-235ENST00000628566 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
NR1I3-235ENST00000628566 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
NR1I3-235ENST00000628566 ADGBQ8N7X0 1667 aa11.95□□□□□ -0.5
NR1I3-235ENST00000628566 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
NR1I3-235ENST00000628566 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
NR1I3-235ENST00000628566 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
NR1I3-235ENST00000628566 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
NR1I3-235ENST00000628566 A2MP01023 1474 aa11.94□□□□□ -0.5
NR1I3-235ENST00000628566 AGLP35573 1532 aa11.93□□□□□ -0.5
NR1I3-235ENST00000628566 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
NR1I3-235ENST00000628566 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
NR1I3-235ENST00000628566 MLECQ14165 292 aa11.92□□□□□ -0.5
NR1I3-235ENST00000628566 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
NR1I3-235ENST00000628566 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
NR1I3-235ENST00000628566 DAPK1P53355 1430 aa11.91□□□□□ -0.5
NR1I3-235ENST00000628566 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
NR1I3-235ENST00000628566 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.5
NR1I3-235ENST00000628566 ANKRD30AQ9BXX3 1397 aa11.9□□□□□ -0.5
NR1I3-235ENST00000628566 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
NR1I3-235ENST00000628566 ABCC5O15440 1437 aa11.89□□□□□ -0.51
NR1I3-235ENST00000628566 FOXD1Q16676 465 aa11.89□□□□□ -0.51
NR1I3-235ENST00000628566 CROCC2H7BZ55 1655 aa11.89□□□□□ -0.51
NR1I3-235ENST00000628566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
NR1I3-235ENST00000628566 FER1L4A9Z1Z3 1794 aa11.88□□□□□ -0.51
NR1I3-235ENST00000628566 PPP6R1Q9UPN7 881 aa11.88□□□□□ -0.51
NR1I3-235ENST00000628566 MADDQ8WXG6 1647 aa11.88□□□□□ -0.51
NR1I3-235ENST00000628566 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
NR1I3-235ENST00000628566 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 KIF3BO15066 747 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 GGT6Q6P531 493 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 KIF15Q9NS87 1388 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 PTPRMP28827 1452 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
NR1I3-235ENST00000628566 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
NR1I3-235ENST00000628566 RRP7BPQ9NSQ0 103 aa11.84□□□□□ -0.51
NR1I3-235ENST00000628566 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
NR1I3-235ENST00000628566 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
NR1I3-235ENST00000628566 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
NR1I3-235ENST00000628566 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms