RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 EHBP1L1Q8N3D4 1523 aa41.51■■■■■ 4.24
UBE2A-207ENST00000628549 CDC42BPAQ5VT25 1732 aa41.5■■■■■ 4.23
UBE2A-207ENST00000628549 FRMPD1Q5SYB0 1578 aa41.5■■■■■ 4.23
UBE2A-207ENST00000628549 TIAM1Q13009 1591 aa41.46■■■■■ 4.23
UBE2A-207ENST00000628549 SCAPERQ9BY12 1400 aa41.43■■■■■ 4.22
UBE2A-207ENST00000628549 AEBP2Q6ZN18 517 aaPredicted RBP41.4■■■■■ 4.22
UBE2A-207ENST00000628549 CCNB3Q8WWL7 1395 aa41.36■■■■■ 4.21
UBE2A-207ENST00000628549 POGZQ7Z3K3 1410 aa41.35■■■■■ 4.21
UBE2A-207ENST00000628549 SUPT6HQ7KZ85 1726 aaKnown RBP41.35■■■■■ 4.21
UBE2A-207ENST00000628549 ZMYM4Q5VZL5 1548 aa41.35■■■■■ 4.21
UBE2A-207ENST00000628549 MAP3K1Q13233 1512 aa41.33■■■■■ 4.21
UBE2A-207ENST00000628549 GPATCH8Q9UKJ3 1502 aaKnown RBP41.33■■■■■ 4.21
UBE2A-207ENST00000628549 ITSN2Q9NZM3 1697 aa41.32■■■■■ 4.2
UBE2A-207ENST00000628549 ARHGEF40Q8TER5 1519 aa41.28■■■■■ 4.2
UBE2A-207ENST00000628549 ZNF518AQ6AHZ1 1483 aa41.28■■■■■ 4.2
UBE2A-207ENST00000628549 MAGI2Q86UL8 1455 aa41.28■■■■■ 4.2
UBE2A-207ENST00000628549 ABCC1P33527 1531 aa41.27■■■■■ 4.2
UBE2A-207ENST00000628549 APLP2Q06481 763 aa41.26■■■■■ 4.2
UBE2A-207ENST00000628549 ZFYVE16Q7Z3T8 1539 aa41.24■■■■■ 4.19
UBE2A-207ENST00000628549 LRRC9Q6ZRR7 1453 aa41.23■■■■■ 4.19
UBE2A-207ENST00000628549 CFDP1Q9UEE9 299 aaPredicted RBP41.23■■■■■ 4.19
UBE2A-207ENST00000628549 ZNF777Q9ULD5 760 aaPredicted RBP41.22■■■■■ 4.19
UBE2A-207ENST00000628549 KDM4FA0A1W2PPD8 638 aa41.2■■■■■ 4.19
UBE2A-207ENST00000628549 NCOA2Q15596 1464 aa41.2■■■■■ 4.19
UBE2A-207ENST00000628549 SAMD9LQ8IVG5 1584 aa41.2■■■■■ 4.19
UBE2A-207ENST00000628549 KDM5CP41229 1560 aa41.17■■■■■ 4.18
UBE2A-207ENST00000628549 PLEKHH2Q8IVE3 1493 aa41.17■■■■■ 4.18
UBE2A-207ENST00000628549 HECW2Q9P2P5 1572 aa41.12■■■■■ 4.17
UBE2A-207ENST00000628549 AFAP1Q8N556 730 aa41.11■■■■■ 4.17
UBE2A-207ENST00000628549 ARHGEF12Q9NZN5 1544 aa41.11■■■■■ 4.17
UBE2A-207ENST00000628549 YEATS2Q9ULM3 1422 aa41.1■■■■■ 4.17
UBE2A-207ENST00000628549 SYCP2Q9BX26 1530 aa41.1■■■■■ 4.17
UBE2A-207ENST00000628549 MYT1LQ9UL68 1186 aa41.1■■■■■ 4.17
UBE2A-207ENST00000628549 ARID4BQ4LE39 1312 aaPredicted RBP41.08■■■■■ 4.17
UBE2A-207ENST00000628549 TRAPPC8Q9Y2L5 1435 aa41.08■■■■■ 4.17
UBE2A-207ENST00000628549 KIAA1107Q9UPP5 1409 aa41.07■■■■■ 4.16
UBE2A-207ENST00000628549 KANK4Q5T7N3 995 aaPredicted RBP41.05■■■■■ 4.16
UBE2A-207ENST00000628549 MLH3Q9UHC1 1453 aa41.02■■■■■ 4.16
UBE2A-207ENST00000628549 ATP10AO60312 1499 aa41.02■■■■■ 4.16
UBE2A-207ENST00000628549 BCORL1Q5H9F3 1711 aa41■■■■■ 4.15
UBE2A-207ENST00000628549 HNRNPMP52272 730 aaKnown RBP eCLIP40.99■■■■■ 4.15
UBE2A-207ENST00000628549 C9orf84Q5VXU9 1444 aa40.98■■■■■ 4.15
UBE2A-207ENST00000628549 DIP2CQ9Y2E4 1556 aa40.94■■■■■ 4.14
UBE2A-207ENST00000628549 KIDINS220Q9ULH0 1771 aa40.94■■■■■ 4.14
UBE2A-207ENST00000628549 ADAMTSL3P82987 1691 aa40.93■■■■■ 4.14
UBE2A-207ENST00000628549 ABCA6Q8N139 1617 aa40.93■■■■■ 4.14
UBE2A-207ENST00000628549 CAMSAP2Q08AD1 1489 aa40.91■■■■■ 4.14
UBE2A-207ENST00000628549 ZNF644Q9H582 1327 aaPredicted RBP40.91■■■■■ 4.14
UBE2A-207ENST00000628549 SPAG9O60271 1321 aaKnown RBP40.9■■■■■ 4.14
UBE2A-207ENST00000628549 SIGLEC1Q9BZZ2 1709 aa40.88■■■■■ 4.13
UBE2A-207ENST00000628549 MYOM3Q5VTT5 1437 aa40.87■■■■■ 4.13
UBE2A-207ENST00000628549 REREQ9P2R6 1566 aa40.86■■■■■ 4.13
UBE2A-207ENST00000628549 ATP7AQ04656 1500 aa40.84■■■■■ 4.13
UBE2A-207ENST00000628549 INO80Q9ULG1 1556 aaPredicted RBP40.83■■■■■ 4.13
UBE2A-207ENST00000628549 MIA2Q96PC5 1412 aa40.83■■■■■ 4.13
UBE2A-207ENST00000628549 MBD5Q9P267 1494 aa40.83■■■■■ 4.13
UBE2A-207ENST00000628549 MADDQ8WXG6 1647 aa40.81■■■■■ 4.12
UBE2A-207ENST00000628549 RSPH4AQ5TD94 716 aa40.8■■■■■ 4.12
UBE2A-207ENST00000628549 CCDC141Q6ZP82 1450 aa40.78■■■■■ 4.12
UBE2A-207ENST00000628549 ARHGEF5Q12774 1597 aa40.76■■■■■ 4.12
UBE2A-207ENST00000628549 FER1L4A9Z1Z3 1794 aa40.74■■■■■ 4.11
UBE2A-207ENST00000628549 MLECQ14165 292 aa40.74■■■■■ 4.11
UBE2A-207ENST00000628549 RIMS1Q86UR5 1692 aaKnown RBP40.74■■■■■ 4.11
UBE2A-207ENST00000628549 AGLP35573 1532 aa40.72■■■■■ 4.11
UBE2A-207ENST00000628549 ADGBQ8N7X0 1667 aa40.72■■■■■ 4.11
UBE2A-207ENST00000628549 RTEL1-TNFRSF6BF6WH68 1400 aa40.7■■■■■ 4.11
UBE2A-207ENST00000628549 PTPRMP28827 1452 aa40.69■■■■■ 4.1
UBE2A-207ENST00000628549 PTPN23Q9H3S7 1636 aa40.65■■■■■ 4.1
UBE2A-207ENST00000628549 TSPY4P0CV99 314 aa40.64■■■■■ 4.1
UBE2A-207ENST00000628549 TSPY10P0CW01 314 aa40.64■■■■■ 4.1
UBE2A-207ENST00000628549 A2MP01023 1474 aa40.63■■■■■ 4.09
UBE2A-207ENST00000628549 FGD6Q6ZV73 1430 aa40.6■■■■■ 4.09
UBE2A-207ENST00000628549 PLXNC1O60486 1568 aa40.58■■■■■ 4.09
UBE2A-207ENST00000628549 MAST1Q9Y2H9 1570 aa40.54■■■■■ 4.08
UBE2A-207ENST00000628549 TCOF1Q13428 1488 aaKnown RBP40.51■■■■■ 4.08
UBE2A-207ENST00000628549 ESF1Q9H501 851 aaKnown RBP40.51■■■■■ 4.08
UBE2A-207ENST00000628549 CROCC2H7BZ55 1655 aa40.48■■■■■ 4.07
UBE2A-207ENST00000628549 DHX29Q7Z478 1369 aaKnown RBP40.45■■■■■ 4.07
UBE2A-207ENST00000628549 DNMT1P26358 1616 aaKnown RBP40.44■■■■■ 4.06
UBE2A-207ENST00000628549 SHANK2Q9UPX8 1470 aa40.41■■■■■ 4.06
UBE2A-207ENST00000628549 PLPPR3Q6T4P5 718 aa40.41■■■■■ 4.06
UBE2A-207ENST00000628549 CNTLNQ9NXG0 1405 aa40.4■■■■■ 4.06
UBE2A-207ENST00000628549 ABCC5O15440 1437 aa40.37■■■■■ 4.05
UBE2A-207ENST00000628549 DAPK1P53355 1430 aa40.37■■■■■ 4.05
UBE2A-207ENST00000628549 FAM50AQ14320 339 aaKnown RBP40.34■■■■■ 4.05
UBE2A-207ENST00000628549 MROH2AA6NES4 1674 aa40.34■■■■■ 4.05
UBE2A-207ENST00000628549 GGT6Q6P531 493 aa40.33■■■■■ 4.05
UBE2A-207ENST00000628549 C3P01024 1663 aa40.32■■■■■ 4.05
UBE2A-207ENST00000628549 PPARGC1BQ86YN6 1023 aaKnown RBP40.3■■■■■ 4.04
UBE2A-207ENST00000628549 PPP6R1Q9UPN7 881 aa40.3■■■■■ 4.04
UBE2A-207ENST00000628549 KIF3BO15066 747 aa40.29■■■■■ 4.04
UBE2A-207ENST00000628549 CLTCQ00610 1675 aaKnown RBP40.29■■■■■ 4.04
UBE2A-207ENST00000628549 EIF2AK4Q9P2K8 1649 aaKnown RBP40.27■■■■■ 4.04
UBE2A-207ENST00000628549 DUOX2Q9NRD8 1548 aa40.26■■■■■ 4.04
UBE2A-207ENST00000628549 SETD1BQ9UPS6 1966 aaKnown RBP40.26■■■■■ 4.04
UBE2A-207ENST00000628549 CEBPAP49715 358 aaPredicted RBP40.24■■■■■ 4.03
UBE2A-207ENST00000628549 PREX1Q8TCU6 1659 aa40.21■■■■■ 4.03
UBE2A-207ENST00000628549 KIF15Q9NS87 1388 aa40.21■■■■■ 4.03
UBE2A-207ENST00000628549 FAM135AQ9P2D6 1515 aa40.21■■■■■ 4.03
UBE2A-207ENST00000628549 ANKRD30AQ9BXX3 1397 aa40.2■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms