RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 ASXL2Q76L83 1435 aa15.22■□□□□ 0.03
FOXCUT-201ENST00000628509 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
FOXCUT-201ENST00000628509 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
FOXCUT-201ENST00000628509 MYO5CQ9NQX4 1742 aa15.21■□□□□ 0.03
FOXCUT-201ENST00000628509 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.03
FOXCUT-201ENST00000628509 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
FOXCUT-201ENST00000628509 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
FOXCUT-201ENST00000628509 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
FOXCUT-201ENST00000628509 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
FOXCUT-201ENST00000628509 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
FOXCUT-201ENST00000628509 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
FOXCUT-201ENST00000628509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
FOXCUT-201ENST00000628509 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
FOXCUT-201ENST00000628509 EFCAB2Q5VUJ9 269 aa15.17■□□□□ 0.02
FOXCUT-201ENST00000628509 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
FOXCUT-201ENST00000628509 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
FOXCUT-201ENST00000628509 ARHGAP5Q13017 1502 aa15.16■□□□□ 0.02
FOXCUT-201ENST00000628509 PLCH2O75038 1416 aa15.15■□□□□ 0.02
FOXCUT-201ENST00000628509 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
FOXCUT-201ENST00000628509 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
FOXCUT-201ENST00000628509 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
FOXCUT-201ENST00000628509 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
FOXCUT-201ENST00000628509 TTC37Q6PGP7 1564 aa15.13■□□□□ 0.01
FOXCUT-201ENST00000628509 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
FOXCUT-201ENST00000628509 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
FOXCUT-201ENST00000628509 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
FOXCUT-201ENST00000628509 ITGAEP38570 1179 aa15.12■□□□□ 0.01
FOXCUT-201ENST00000628509 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
FOXCUT-201ENST00000628509 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
FOXCUT-201ENST00000628509 CDC42BPBQ9Y5S2 1711 aa15.1■□□□□ 0.01
FOXCUT-201ENST00000628509 GLI2P10070 1586 aa15.1■□□□□ 0.01
FOXCUT-201ENST00000628509 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
FOXCUT-201ENST00000628509 HRCP23327 699 aa15.09■□□□□ 0.01
FOXCUT-201ENST00000628509 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
FOXCUT-201ENST00000628509 ARHGEF5Q12774 1597 aa15.08■□□□□ 0
FOXCUT-201ENST00000628509 DAPK1P53355 1430 aa15.08■□□□□ 0
FOXCUT-201ENST00000628509 ROCK1Q13464 1354 aa15.07■□□□□ 0
FOXCUT-201ENST00000628509 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
FOXCUT-201ENST00000628509 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
FOXCUT-201ENST00000628509 FANCAO15360 1455 aa15.06■□□□□ 0
FOXCUT-201ENST00000628509 CCDC141Q6ZP82 1450 aa15.06■□□□□ 0
FOXCUT-201ENST00000628509 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
FOXCUT-201ENST00000628509 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
FOXCUT-201ENST00000628509 TEX14Q8IWB6 1497 aa15.04■□□□□ -0
FOXCUT-201ENST00000628509 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
FOXCUT-201ENST00000628509 ADGBQ8N7X0 1667 aa15.03■□□□□ -0
FOXCUT-201ENST00000628509 SAMD9LQ8IVG5 1584 aa15.03■□□□□ -0
FOXCUT-201ENST00000628509 NEO1Q92859 1461 aa15.03■□□□□ -0
FOXCUT-201ENST00000628509 HFM1A2PYH4 1435 aa15.03■□□□□ -0
FOXCUT-201ENST00000628509 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
FOXCUT-201ENST00000628509 ABCC5O15440 1437 aa15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 ABCC1P33527 1531 aa15.01□□□□□ -0.01
FOXCUT-201ENST00000628509 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
FOXCUT-201ENST00000628509 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
FOXCUT-201ENST00000628509 ADGRL1O94910 1474 aa15□□□□□ -0.01
FOXCUT-201ENST00000628509 ADGRL2O95490 1459 aa15□□□□□ -0.01
FOXCUT-201ENST00000628509 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
FOXCUT-201ENST00000628509 GCC2Q8IWJ2 1684 aa14.99□□□□□ -0.01
FOXCUT-201ENST00000628509 C9orf84Q5VXU9 1444 aa14.99□□□□□ -0.01
FOXCUT-201ENST00000628509 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
FOXCUT-201ENST00000628509 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
FOXCUT-201ENST00000628509 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
FOXCUT-201ENST00000628509 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
FOXCUT-201ENST00000628509 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
FOXCUT-201ENST00000628509 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
FOXCUT-201ENST00000628509 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
FOXCUT-201ENST00000628509 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
FOXCUT-201ENST00000628509 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
FOXCUT-201ENST00000628509 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
FOXCUT-201ENST00000628509 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
FOXCUT-201ENST00000628509 NAIPQ13075 1403 aa14.94□□□□□ -0.02
FOXCUT-201ENST00000628509 NCOA1Q15788 1441 aa14.94□□□□□ -0.02
FOXCUT-201ENST00000628509 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
FOXCUT-201ENST00000628509 PLXNC1O60486 1568 aa14.93□□□□□ -0.02
FOXCUT-201ENST00000628509 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
FOXCUT-201ENST00000628509 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
FOXCUT-201ENST00000628509 DENND4BO75064 1496 aaPredicted RBP14.92□□□□□ -0.02
FOXCUT-201ENST00000628509 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
FOXCUT-201ENST00000628509 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
FOXCUT-201ENST00000628509 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
FOXCUT-201ENST00000628509 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
FOXCUT-201ENST00000628509 KIF13AQ9H1H9 1805 aa14.89□□□□□ -0.03
FOXCUT-201ENST00000628509 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
FOXCUT-201ENST00000628509 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
FOXCUT-201ENST00000628509 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
FOXCUT-201ENST00000628509 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
FOXCUT-201ENST00000628509 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
FOXCUT-201ENST00000628509 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
FOXCUT-201ENST00000628509 MLH3Q9UHC1 1453 aa14.86□□□□□ -0.03
FOXCUT-201ENST00000628509 TSPOAP1O95153 1857 aa14.86□□□□□ -0.03
FOXCUT-201ENST00000628509 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
FOXCUT-201ENST00000628509 KDM5CP41229 1560 aa14.85□□□□□ -0.03
FOXCUT-201ENST00000628509 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
FOXCUT-201ENST00000628509 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
FOXCUT-201ENST00000628509 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
FOXCUT-201ENST00000628509 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms